MGE detailed information
MGE type: IScluster/Tn MGE length: 15001 bp
Accession: NZ_CP013769 Location: 131942..146942 Organism: Piscirickettsia salmonis strain PM23019A Replicon: plasmid p1PS3
Accession: NZ_CP013769 Location: 131942..146942 Organism: Piscirickettsia salmonis strain PM23019A Replicon: plasmid p1PS3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI50_RS16545 () | 127020..127649 | - | 630 | WP_129556706.1 | hypothetical protein | - |
| AVI50_RS16550 () | 127740..128039 | - | 300 | WP_016211884.1 | nucleotidyltransferase domain-containing protein | - |
| AVI50_RS16555 () | 128036..128500 | - | 465 | WP_081377909.1 | nucleotidyltransferase substrate binding protein | - |
| AVI50_RS16560 () | 129462..130385 | + | 924 | WP_052104769.1 | chemotaxis protein | - |
| AVI50_RS18730 () | 130700..131719 | + | 1020 | WP_129556707.1 | hypothetical protein | - |
| AVI50_RS18735 () | 131942..132070 | + | 129 | Protein_182 | IS6 family transposase ISPsa2 | Transposase |
| AVI50_RS16580 () | 133321..134049 | + | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI50_RS16585 () | 134147..134560 | + | 414 | WP_016212014.1 | DUF2190 family protein | - |
| AVI50_RS16590 () | 134964..135191 | + | 228 | WP_155047016.1 | hypothetical protein | - |
| AVI50_RS16595 () | 135221..135466 | + | 246 | WP_047927838.1 | hypothetical protein | - |
| AVI50_RS16600 () | 135463..135762 | + | 300 | WP_016212018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AVI50_RS16605 () | 135919..136614 | - | 696 | WP_016212019.1 | IS6 family transposase ISSba18 | Transposase |
| AVI50_RS16610 () | 136950..137327 | + | 378 | Protein_190 | IS6 family transposase ISPsa2 | Transposase |
| AVI50_RS16615 () | 137428..138207 | + | 780 | WP_081377351.1 | IS91 family transposase ISVa3 | Transposase |
| AVI50_RS16625 () | 138396..138728 | + | 333 | WP_032126739.1 | IS91 family transposase ISEc37 | Transposase |
| AVI50_RS16630 () | 138893..139270 | + | 378 | WP_016212154.1 | IS3 family transposase ISSde6 | Transposase |
| AVI50_RS16635 () | 139577..139960 | - | 384 | WP_016212152.1 | hypothetical protein | - |
| AVI50_RS16640 () | 140430..141158 | - | 729 | WP_075273842.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI50_RS16645 () | 141274..141600 | - | 327 | WP_036781349.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AVI50_RS16650 () | 141602..141844 | - | 243 | WP_016212365.1 | antidote-toxin recognition MazE family protein | Antitoxin Detail |
| AVI50_RS16655 () | 142049..142489 | + | 441 | Protein_198 | tyrosine-type recombinase/integrase | - |
| AVI50_RS16660 () | 142557..143285 | + | 729 | WP_075274745.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI50_RS16665 () | 143568..145202 | + | 1635 | WP_075273844.1 | protein kinase | - |
| AVI50_RS19210 () | 145323..146054 | + | 732 | WP_016212311.1 | hypothetical protein | - |
| AVI50_RS16675 () | 146208..146942 | - | 735 | WP_075273857.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI50_RS16680 () | 147733..147951 | + | 219 | WP_016212407.1 | transposase | - |
| AVI50_RS16685 () | 148007..148240 | + | 234 | WP_016212404.1 | hypothetical protein | - |
| AVI50_RS16690 () | 148361..150547 | + | 2187 | WP_075273881.1 | ATP-dependent RecD-like DNA helicase | - |
| AVI50_RS16695 () | 150557..150958 | - | 402 | WP_036779532.1 | helix-turn-helix domain-containing protein | - |
| AVI50_RS16700 () | 150955..151242 | - | 288 | WP_016212456.1 | type II toxin-antitoxin system HigB family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|