MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82125 bp
Accession: NZ_CP013764 Location: 1..82125 Organism: Piscirickettsia salmonis strain PM21567A Replicon: plasmid p2PS2
Accession: NZ_CP013764 Location: 1..82125 Organism: Piscirickettsia salmonis strain PM21567A Replicon: plasmid p2PS2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI49_RS16370 () | 1091..2113 | + | 1023 | WP_016212198.1 | AAA family ATPase | - |
| AVI49_RS16375 () | 2106..2630 | + | 525 | WP_016212199.1 | hypothetical protein | - |
| AVI49_RS16380 () | 3128..3814 | + | 687 | WP_017377658.1 | Fic family protein | - |
| AVI49_RS16385 () | 3818..4384 | + | 567 | WP_054300664.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| AVI49_RS16390 () | 4474..5832 | + | 1359 | WP_075273687.1 | DEAD/DEAH box helicase | - |
| AVI49_RS16395 () | 5909..9298 | + | 3390 | WP_054300676.1 | TM0106 family RecB-like putative nuclease | - |
| AVI49_RS16405 () | 10046..12313 | + | 2268 | WP_054300661.1 | hypothetical protein | - |
| AVI49_RS16415 () | 12817..14541 | - | 1725 | WP_054300659.1 | ATP-binding protein | - |
| AVI49_RS16420 () | 14554..15558 | - | 1005 | WP_075273679.1 | SIR2 family protein | - |
| AVI49_RS16425 () | 15685..16023 | - | 339 | WP_054300657.1 | hypothetical protein | - |
| AVI49_RS16430 () | 16025..16288 | - | 264 | WP_054300656.1 | hypothetical protein | - |
| AVI49_RS16435 () | 16780..17043 | + | 264 | WP_054300655.1 | RNA-binding protein | - |
| AVI49_RS16440 () | 17108..19807 | - | 2700 | WP_075278623.1 | ATP-dependent helicase | - |
| AVI49_RS16445 () | 20190..20747 | + | 558 | WP_054300675.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| AVI49_RS16450 () | 20809..21069 | + | 261 | WP_054300654.1 | hypothetical protein | - |
| AVI49_RS16455 () | 21119..21427 | + | 309 | WP_081007087.1 | helix-turn-helix transcriptional regulator | - |
| AVI49_RS16460 () | 21526..21933 | + | 408 | WP_054300652.1 | hypothetical protein | - |
| AVI49_RS16465 () | 21940..22374 | + | 435 | WP_054300651.1 | hypothetical protein | - |
| AVI49_RS16470 () | 22395..22715 | + | 321 | WP_054300650.1 | hypothetical protein | - |
| AVI49_RS16475 () | 23129..23371 | + | 243 | WP_054300649.1 | hypothetical protein | Antitoxin Detail |
| AVI49_RS16480 () | 23373..23699 | + | 327 | WP_054300674.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AVI49_RS16485 () | 23816..25051 | - | 1236 | WP_054300648.1 | hypothetical protein | - |
| AVI49_RS16490 () | 25077..26777 | - | 1701 | WP_054300647.1 | DUF4338 domain-containing protein | - |
| AVI49_RS16495 () | 26890..27189 | - | 300 | WP_075273685.1 | HU family DNA-binding protein | - |
| AVI49_RS19115 () | 27375..27599 | + | 225 | WP_196214208.1 | hypothetical protein | - |
| AVI49_RS19120 () | 27593..27769 | + | 177 | WP_172673426.1 | transposase | - |
| AVI49_RS16510 () | 27766..28737 | - | 972 | WP_054300646.1 | IS701 family transposase ISMhu9 | Transposase |
| AVI49_RS16515 () | 28794..29105 | + | 312 | WP_054300645.1 | HU family DNA-binding protein | - |
| AVI49_RS16520 () | 29214..29558 | + | 345 | WP_054300644.1 | hypothetical protein | - |
| AVI49_RS16525 () | 29555..29731 | - | 177 | Protein_30 | IS30 family transposase ISAs2 | Transposase |
| AVI49_RS16530 () | 29727..29954 | + | 228 | Protein_31 | transposase | - |
| AVI49_RS16535 () | 29965..30450 | - | 486 | WP_027242575.1 | hypothetical protein | - |
| AVI49_RS16540 () | 30484..32346 | - | 1863 | WP_027242576.1 | RecX family transcriptional regulator | - |
| AVI49_RS16545 () | 32443..32712 | + | 270 | WP_054300643.1 | WGR domain-containing protein | - |
| AVI49_RS16550 () | 32826..33137 | + | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| AVI49_RS16555 () | 33134..33535 | + | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| AVI49_RS16560 () | 33545..35731 | - | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| AVI49_RS16565 () | 35908..36141 | - | 234 | WP_027242580.1 | hypothetical protein | - |
| AVI49_RS16570 () | 36589..36960 | + | 372 | WP_047927049.1 | hypothetical protein | - |
| AVI49_RS16575 () | 37029..37517 | + | 489 | WP_054300642.1 | DnaJ domain-containing protein | - |
| AVI49_RS16585 () | 38611..39399 | + | 789 | WP_054300640.1 | hypothetical protein | - |
| AVI49_RS16590 () | 39463..39756 | - | 294 | WP_036774899.1 | hypothetical protein | - |
| AVI49_RS16595 () | 40343..40786 | + | 444 | WP_054300639.1 | hypothetical protein | - |
| AVI49_RS16600 () | 40777..41106 | + | 330 | WP_054300638.1 | hypothetical protein | - |
| AVI49_RS16605 () | 41101..42273 | - | 1173 | WP_075278624.1 | toprim domain-containing protein | - |
| AVI49_RS16610 () | 42453..47078 | - | 4626 | WP_075273681.1 | Multifunctional conjugation protein TraI | Relaxase |
| AVI49_RS16615 () | 47169..47348 | - | 180 | WP_054300636.1 | hypothetical protein | - |
| AVI49_RS16620 () | 47360..48109 | - | 750 | WP_054300635.1 | thioredoxin domain-containing protein | - |
| AVI49_RS16625 () | 48112..50106 | - | 1995 | WP_054300634.1 | type IV conjugative transfer system coupling protein TraD | - |
| AVI49_RS16635 () | 50674..50994 | - | 321 | WP_054300632.1 | hypothetical protein | - |
| AVI49_RS16640 () | 51033..51776 | - | 744 | WP_054300631.1 | complement resistance protein TraT | - |
| AVI49_RS16645 () | 51859..52176 | + | 318 | WP_054300630.1 | hypothetical protein | - |
| AVI49_RS16650 () | 52184..54973 | - | 2790 | WP_054300629.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AVI49_RS16655 () | 54975..56357 | - | 1383 | WP_054300628.1 | conjugal transfer protein TraH | - |
| AVI49_RS16660 () | 56350..56841 | - | 492 | WP_054300627.1 | conjugal transfer protein TraF | - |
| AVI49_RS16665 () | 56838..57650 | - | 813 | WP_054300626.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AVI49_RS16670 () | 57647..59542 | - | 1896 | WP_054300625.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AVI49_RS16675 () | 59542..60210 | - | 669 | WP_054300624.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AVI49_RS16680 () | 60221..61210 | - | 990 | WP_054300623.1 | conjugal transfer pilus assembly protein TraU | - |
| AVI49_RS16685 () | 61203..61505 | - | 303 | WP_054300622.1 | hypothetical protein | - |
| AVI49_RS16690 () | 61541..61843 | - | 303 | WP_054300621.1 | hypothetical protein | - |
| AVI49_RS16695 () | 61857..62327 | - | 471 | WP_054300620.1 | hypothetical protein | - |
| AVI49_RS16700 () | 62346..62963 | - | 618 | WP_054300619.1 | type-F conjugative transfer system protein TraW | - |
| AVI49_RS16705 () | 62956..63264 | - | 309 | WP_155066178.1 | hypothetical protein | - |
| AVI49_RS16710 () | 63290..65869 | - | 2580 | WP_054300617.1 | type IV secretion system protein TraC | - |
| AVI49_RS16715 () | 65918..66853 | - | 936 | WP_075278625.1 | type IV secretion system DNA-binding domain-containing protein | - |
| AVI49_RS16720 () | 67027..67470 | - | 444 | WP_054300615.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AVI49_RS16725 () | 67476..68945 | - | 1470 | WP_054300614.1 | hypothetical protein | - |
| AVI49_RS16730 () | 68955..69659 | - | 705 | WP_054300613.1 | type-F conjugative transfer system secretin TraK | - |
| AVI49_RS16735 () | 69652..70221 | - | 570 | WP_054300612.1 | hypothetical protein | - |
| AVI49_RS16740 () | 70229..70519 | - | 291 | WP_054300611.1 | type IV conjugative transfer system protein TraL | - |
| AVI49_RS16745 () | 70534..70854 | - | 321 | WP_054300610.1 | hypothetical protein | - |
| AVI49_RS16750 () | 70856..71500 | - | 645 | WP_054300609.1 | hypothetical protein | - |
| AVI49_RS16755 () | 71656..71913 | - | 258 | WP_155053509.1 | hypothetical protein | - |
| AVI49_RS18795 () | 72055..72219 | - | 165 | WP_155074367.1 | hypothetical protein | - |
| AVI49_RS16760 () | 72291..72482 | - | 192 | WP_054300607.1 | hypothetical protein | - |
| AVI49_RS16765 () | 72672..73286 | + | 615 | WP_054300672.1 | helix-turn-helix domain-containing protein | - |
| AVI49_RS16770 () | 73258..73704 | - | 447 | WP_054300671.1 | helix-turn-helix domain-containing protein | - |
| AVI49_RS16775 () | 73704..74447 | - | 744 | WP_081007085.1 | queuosine precursor transporter | - |
| AVI49_RS16780 () | 74463..74936 | - | 474 | WP_054300670.1 | hypothetical protein | - |
| AVI49_RS16785 () | 74949..75662 | - | 714 | WP_054300669.1 | class I SAM-dependent methyltransferase | - |
| AVI49_RS18800 () | 76116..76688 | + | 573 | WP_155047022.1 | helix-turn-helix transcriptional regulator | - |
| AVI49_RS16795 () | 76795..77364 | + | 570 | WP_054300667.1 | hypothetical protein | - |
| AVI49_RS16800 () | 77361..78098 | - | 738 | WP_054300666.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| AVI49_RS16805 () | 78106..78546 | - | 441 | WP_054300583.1 | thioesterase family protein | - |
| AVI49_RS16810 () | 78585..79715 | - | 1131 | WP_054300584.1 | hypothetical protein | - |
| AVI49_RS16815 () | 79783..80568 | - | 786 | WP_054300665.1 | class I SAM-dependent methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|