MGE detailed information
MGE type: IScluster/Tn MGE length: 15238 bp
Accession: NZ_CP013763 Location: 24610..39847 Organism: Piscirickettsia salmonis strain PM21567A Replicon: plasmid p1PS2
Accession: NZ_CP013763 Location: 24610..39847 Organism: Piscirickettsia salmonis strain PM21567A Replicon: plasmid p1PS2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI49_RS15675 () | 20598..20885 | + | 288 | WP_016212456.1 | type II toxin-antitoxin system HigB family toxin | - |
| AVI49_RS15680 () | 20882..21283 | + | 402 | WP_036779532.1 | helix-turn-helix domain-containing protein | - |
| AVI49_RS15685 () | 21293..23479 | - | 2187 | WP_075273881.1 | ATP-dependent RecD-like DNA helicase | - |
| AVI49_RS15690 () | 23600..23833 | - | 234 | WP_016212404.1 | hypothetical protein | - |
| AVI49_RS15695 () | 23889..24107 | - | 219 | WP_016212407.1 | transposase | - |
| AVI49_RS15700 () | 24610..25344 | + | 735 | WP_075273857.1 | IS6 family transposase | - |
| AVI49_RS15705 () | 25498..26229 | - | 732 | WP_016212311.1 | hypothetical protein | - |
| AVI49_RS15710 () | 26350..27933 | - | 1584 | WP_052047129.1 | protein kinase | - |
| AVI49_RS15715 () | 28216..28485 | - | 270 | Protein_36 | DDE-type integrase/transposase/recombinase | - |
| AVI49_RS18735 () | 28412..28591 | + | 180 | WP_155047017.1 | hypothetical protein | - |
| AVI49_RS15720 () | 28765..29232 | - | 468 | Protein_38 | IS6-like element ISPsa2 family transposase | - |
| AVI49_RS15725 () | 29300..29740 | - | 441 | Protein_39 | tyrosine-type recombinase/integrase | - |
| AVI49_RS15730 () | 29945..30187 | + | 243 | WP_016212365.1 | antidote-toxin recognition MazE family protein | Antitoxin Detail |
| AVI49_RS15735 () | 30189..30515 | + | 327 | WP_036781349.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AVI49_RS15740 () | 30631..31359 | + | 729 | WP_075273842.1 | IS6 family transposase | - |
| AVI49_RS15745 () | 31829..32212 | + | 384 | WP_016212152.1 | hypothetical protein | - |
| AVI49_RS15750 () | 32519..32896 | - | 378 | WP_016212154.1 | DDE-type integrase/transposase/recombinase | - |
| AVI49_RS15755 () | 33061..33393 | - | 333 | WP_032126739.1 | transposase | - |
| AVI49_RS15765 () | 33582..34361 | - | 780 | WP_081377351.1 | transposase | - |
| AVI49_RS15770 () | 34462..34839 | - | 378 | Protein_47 | DDE-type integrase/transposase/recombinase | - |
| AVI49_RS15775 () | 35175..35870 | + | 696 | WP_016212019.1 | IS6 family transposase | - |
| AVI49_RS15780 () | 36027..36326 | - | 300 | WP_016212018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AVI49_RS15785 () | 36323..36568 | - | 246 | WP_047927838.1 | hypothetical protein | - |
| AVI49_RS15790 () | 36598..36825 | - | 228 | WP_155047016.1 | hypothetical protein | - |
| AVI49_RS15795 () | 37229..37642 | - | 414 | WP_016212014.1 | DUF2190 family protein | - |
| AVI49_RS15800 () | 37740..38468 | - | 729 | WP_054300202.1 | IS6 family transposase | - |
| AVI49_RS15810 () | 38535..39688 | + | 1154 | WP_105962623.1 | IS3 family transposase | - |
| AVI49_RS18745 () | 39719..39847 | - | 129 | Protein_55 | IS6 family transposase | - |
| AVI49_RS18750 () | 40070..41089 | - | 1020 | WP_129556707.1 | hypothetical protein | - |
| AVI49_RS15820 () | 41404..42327 | - | 924 | WP_052104769.1 | chemotaxis protein | - |
| AVI49_RS15825 () | 43325..43753 | + | 429 | WP_016211886.1 | nucleotidyltransferase substrate binding protein | - |
| AVI49_RS15830 () | 43750..44049 | + | 300 | WP_016211884.1 | nucleotidyltransferase domain-containing protein | - |
| AVI49_RS15835 () | 44140..44769 | + | 630 | WP_129556706.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|