MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39299 bp
Accession: NZ_CP013759 Location: 1..39299 Organism: Piscirickettsia salmonis strain AY6492A Replicon: plasmid p2PS1
Accession: NZ_CP013759 Location: 1..39299 Organism: Piscirickettsia salmonis strain AY6492A Replicon: plasmid p2PS1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI48_RS17945 () | 238..459 | - | 222 | WP_196772250.1 | hypothetical protein | - |
| AVI48_RS17950 () | 477..1100 | - | 624 | WP_196772251.1 | hypothetical protein | - |
| AVI48_RS17955 () | 1126..1917 | - | 792 | WP_081377334.1 | hypothetical protein | - |
| AVI48_RS15990 () | 1896..2141 | - | 246 | WP_075273696.1 | P27 family phage terminase small subunit | - |
| AVI48_RS15995 () | 2482..2865 | - | 384 | WP_032126134.1 | HNH endonuclease | - |
| AVI48_RS18750 () | 3580..3759 | + | 180 | WP_155046773.1 | phosphatase | - |
| AVI48_RS18755 () | 3903..4097 | + | 195 | WP_155764036.1 | hypothetical protein | - |
| AVI48_RS16005 () | 4299..4592 | - | 294 | WP_016210977.1 | zinc ribbon domain-containing protein | - |
| AVI48_RS16010 () | 4771..5554 | - | 784 | Protein_9 | DNA/RNA non-specific endonuclease | - |
| AVI48_RS16015 () | 5566..5972 | - | 407 | Protein_10 | DUF4411 family protein | - |
| AVI48_RS16020 () | 5981..6208 | - | 228 | WP_016210972.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| AVI48_RS16030 () | 6344..7319 | - | 976 | Protein_12 | IS30 family transposase | - |
| AVI48_RS16035 () | 7545..8045 | - | 501 | WP_075273702.1 | hypothetical protein | - |
| AVI48_RS16040 () | 8381..8635 | - | 255 | WP_075273703.1 | hypothetical protein | - |
| AVI48_RS16045 () | 9165..9629 | - | 465 | WP_016212274.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AVI48_RS16050 () | 9640..9834 | - | 195 | WP_032126154.1 | type II toxin-antitoxin system HicA family toxin | - |
| AVI48_RS16055 () | 10050..10625 | + | 576 | WP_075273705.1 | site-specific integrase | - |
| AVI48_RS16060 () | 10750..11043 | + | 294 | WP_081377336.1 | MBL fold metallo-hydrolase | - |
| AVI48_RS16065 () | 11389..12390 | - | 1002 | WP_054300579.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI48_RS16070 () | 12824..13894 | + | 1071 | WP_075273706.1 | hypothetical protein | - |
| AVI48_RS19180 () | 14176..14625 | + | 450 | WP_075273708.1 | prolyl oligopeptidase family serine peptidase | - |
| AVI48_RS16080 () | 14819..15547 | + | 729 | WP_054300580.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI48_RS16085 () | 15689..16621 | + | 933 | WP_144420837.1 | hypothetical protein | - |
| AVI48_RS16090 () | 16651..16941 | + | 291 | Protein_24 | IS6 family transposase | - |
| AVI48_RS16095 () | 17008..17646 | - | 639 | Protein_25 | IS6 family transposase ISPsa2 | Transposase |
| AVI48_RS16100 () | 17712..18440 | - | 729 | WP_054300581.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI48_RS16105 () | 18470..19015 | - | 546 | WP_054300582.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| AVI48_RS16110 () | 19023..19463 | - | 441 | WP_054300583.1 | thioesterase family protein | - |
| AVI48_RS17965 () | 19502..19954 | - | 453 | WP_081377338.1 | hypothetical protein | - |
| AVI48_RS18765 () | 19870..20088 | - | 219 | WP_155764037.1 | hypothetical protein | - |
| AVI48_RS17970 () | 20004..20630 | - | 627 | WP_081377339.1 | hypothetical protein | - |
| AVI48_RS17975 () | 20848..21087 | + | 240 | WP_075275277.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI48_RS16125 () | 21012..21983 | + | 972 | WP_033923677.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI48_RS16130 () | 22158..22616 | - | 459 | WP_054300586.1 | hypothetical protein | - |
| AVI48_RS17980 () | 22931..23170 | + | 240 | WP_075275277.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI48_RS16140 () | 23095..24066 | + | 972 | WP_033923677.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI48_RS18770 () | 24214..24441 | - | 228 | WP_155047027.1 | hypothetical protein | - |
| AVI48_RS16145 () | 24529..24882 | - | 354 | WP_036780061.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AVI48_RS16150 () | 24875..25135 | - | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AVI48_RS16155 () | 25384..26357 | + | 974 | Protein_40 | IS30 family transposase ISPlu1 | Transposase |
| AVI48_RS16160 () | 26534..27766 | - | 1233 | WP_032126623.1 | MFS transporter | - |
| AVI48_RS16165 () | 27879..28904 | - | 1026 | WP_032126388.1 | helix-turn-helix domain-containing protein | - |
| AVI48_RS16170 () | 29665..30687 | + | 1023 | WP_016211377.1 | AAA family ATPase | - |
| AVI48_RS16175 () | 30711..31448 | + | 738 | WP_075273711.1 | hypothetical protein | - |
| AVI48_RS16180 () | 31885..32148 | + | 264 | WP_032126138.1 | RNA-binding protein | - |
| AVI48_RS16185 () | 32460..33431 | - | 972 | WP_033923677.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI48_RS17985 () | 33356..33595 | - | 240 | WP_075275277.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI48_RS16195 () | 33761..34072 | - | 312 | Protein_48 | IS6 family transposase | - |
| AVI48_RS16200 () | 34102..34326 | - | 225 | WP_054300590.1 | hypothetical protein | - |
| AVI48_RS16205 () | 34660..35241 | + | 582 | WP_036778347.1 | hypothetical protein | - |
| AVI48_RS16210 () | 35277..36470 | - | 1194 | WP_054300591.1 | phage major capsid protein | - |
| AVI48_RS16215 () | 36525..37181 | - | 657 | WP_054300592.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| AVI48_RS16220 () | 37144..38385 | - | 1242 | WP_054300593.1 | phage portal protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|