MGE detailed information
MGE type: Genomic_island MGE length: 14398 bp
Accession: NZ_CP013737 Location: 3894707..3909104 Organism: Herbaspirillum rubrisubalbicans M1 Replicon: chromosome
Accession: NZ_CP013737 Location: 3894707..3909104 Organism: Herbaspirillum rubrisubalbicans M1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRUBRI_RS16870 () | 3890443..3893211 | + | 2769 | Protein_3364 | type VI secretion system tip protein VgrG | - |
| HRUBRI_RS16875 () | 3893559..3894704 | + | 1146 | WP_058896298.1 | hypothetical protein | - |
| HRUBRI_RS16880 () | 3894707..3895444 | + | 738 | WP_058896299.1 | hypothetical protein | - |
| HRUBRI_RS25175 () | 3895518..3896153 | + | 636 | WP_058896300.1 | hypothetical protein | - |
| HRUBRI_RS16890 () | 3896150..3896890 | + | 741 | WP_058896301.1 | hypothetical protein | - |
| HRUBRI_RS16895 () | 3897249..3897446 | - | 198 | WP_058896302.1 | hypothetical protein | - |
| HRUBRI_RS16900 () | 3897446..3897676 | - | 231 | WP_017452985.1 | hypothetical protein | - |
| HRUBRI_RS16905 () | 3897828..3899219 | - | 1392 | WP_017452986.1 | ABC transporter substrate-binding protein | - |
| HRUBRI_RS16910 () | 3899360..3900079 | - | 720 | WP_058896303.1 | FadR family transcriptional regulator | - |
| HRUBRI_RS16915 () | 3900273..3900596 | - | 324 | WP_044531392.1 | XRE family transcriptional regulator | Antitoxin Detail |
| HRUBRI_RS16920 () | 3900593..3900937 | - | 345 | WP_058896304.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HRUBRI_RS16925 () | 3901042..3901947 | + | 906 | WP_058896305.1 | LysR family transcriptional regulator | - |
| HRUBRI_RS16930 () | 3902086..3902919 | + | 834 | WP_058896306.1 | putative hydro-lyase | - |
| HRUBRI_RS16935 () | 3903031..3904275 | + | 1245 | WP_044531396.1 | MFS transporter | - |
| HRUBRI_RS16940 () | 3904689..3906371 | + | 1683 | WP_058896307.1 | Na+/H+ antiporter | - |
| HRUBRI_RS16950 () | 3907171..3908193 | + | 1023 | WP_058897613.1 | sensor domain-containing diguanylate cyclase | - |
| HRUBRI_RS16955 () | 3908302..3908853 | + | 552 | WP_058896308.1 | TetR/AcrR family transcriptional regulator C-terminal domain-containing protein | - |
| HRUBRI_RS16960 () | 3909312..3909581 | - | 270 | WP_058897614.1 | hypothetical protein | - |
| HRUBRI_RS16965 () | 3909816..3910604 | - | 789 | WP_197416630.1 | transporter substrate-binding domain-containing protein | - |
| HRUBRI_RS16970 () | 3910642..3911415 | - | 774 | WP_058896310.1 | ABC transporter permease | - |
| HRUBRI_RS16975 () | 3911501..3912502 | - | 1002 | WP_058896311.1 | ABC transporter substrate-binding protein | - |
| HRUBRI_RS16980 () | 3912499..3913272 | - | 774 | WP_058896312.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|