MGE detailed information
MGE type: Genomic_island MGE length: 8801 bp
Accession: NZ_CP013662 Location: 5059567..5068367 Organism: Escherichia coli strain 08-00022 Replicon: chromosome
Accession: NZ_CP013662 Location: 5059567..5068367 Organism: Escherichia coli strain 08-00022 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP48_RS26855 () | 5054830..5056062 | - | 1233 | WP_001137019.1 | multidrug efflux MFS transporter MdtM | - |
| CP48_RS26860 () | 5056529..5057473 | + | 945 | WP_000181173.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CP48_RS26865 () | 5057716..5059128 | - | 1413 | WP_000199311.1 | PLP-dependent aminotransferase family protein | - |
| CP48_RS26870 () | 5059305..5059469 | + | 165 | WP_000394278.1 | DUF1127 domain-containing protein | - |
| CP48_RS26875 () | 5059567..5060439 | + | 873 | WP_064760779.1 | DUF262 domain-containing protein | - |
| CP48_RS26880 () | 5060550..5061662 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| CP48_RS30045 () | 5061846..5063009 | + | 1164 | WP_071940936.1 | DUF1524 domain-containing protein | - |
| CP48_RS26890 () | 5063056..5063397 | - | 342 | WP_000132623.1 | endoribonuclease SymE | Toxin Detail |
| - () | 5063392..5063468 | + | 77 | NuclAT_12 | - | Antitoxin Detail |
| - () | 5063392..5063468 | + | 77 | NuclAT_12 | - | Antitoxin Detail |
| - () | 5063392..5063468 | + | 77 | NuclAT_12 | - | Antitoxin Detail |
| - () | 5063392..5063468 | + | 77 | NuclAT_12 | - | Antitoxin Detail |
| - () | 5063392..5063468 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| - () | 5063392..5063468 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| - () | 5063392..5063468 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| - () | 5063392..5063468 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| CP48_RS26895 () | 5063612..5066875 | - | 3264 | WP_000058876.1 | type I restriction endonuclease subunit R | - |
| CP48_RS26900 () | 5066970..5068367 | - | 1398 | WP_000535016.1 | restriction endonuclease subunit S | - |
| CP48_RS26905 () | 5068357..5069976 | - | 1620 | WP_001029742.1 | type I restriction-modification system subunit M | - |
| CP48_RS26910 () | 5070040..5071206 | - | 1167 | WP_000800829.1 | restriction endonuclease | - |
| CP48_RS31745 () | 5071302..5071522 | + | 221 | Protein_4839 | BrnT family toxin | - |
| CP48_RS26920 () | 5071519..5071821 | + | 303 | WP_000063156.1 | BrnA antitoxin family protein | - |
| CP48_RS26925 () | 5071855..5072811 | - | 957 | WP_001297640.1 | GTPase | - |
| CP48_RS26930 () | 5072822..5073025 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|