MGE detailed information
MGE type: Prophage MGE length: 58002 bp
Accession: NZ_CP013621 Location: 1593631..1651632 Organism: Staphylococcus aureus strain RIVM3897 Replicon: chromosome
Accession: NZ_CP013621 Location: 1593631..1651632 Organism: Staphylococcus aureus strain RIVM3897 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUC50_RS07615 () | 1588893..1589438 | - | 546 | WP_001186909.1 | ECF transporter S component | - |
| AUC50_RS07620 () | 1589842..1590774 | - | 933 | WP_001825312.1 | DUF1672 domain-containing protein | - |
| AUC50_RS07630 () | 1591229..1592125 | - | 897 | WP_001807840.1 | DUF1672 domain-containing protein | - |
| AUC50_RS07635 () | 1592180..1593109 | - | 930 | WP_001825313.1 | DUF1672 domain-containing protein | - |
| AUC50_RS07640 () | 1593200..1593415 | - | 216 | WP_000126130.1 | hypothetical protein | - |
| AUC50_RS07645 () | 1593631..1594047 | - | 417 | WP_016187462.1 | hypothetical protein | - |
| AUC50_RS07650 () | 1594019..1594546 | - | 528 | WP_000455172.1 | DUF4065 domain-containing protein | - |
| AUC50_RS07655 () | 1594568..1594747 | - | 180 | WP_031795408.1 | hypothetical protein | - |
| AUC50_RS07660 () | 1595438..1596892 | - | 1455 | WP_060585267.1 | N-acetylmuramoyl-L-alanine amidase | - |
| AUC50_RS07665 () | 1596904..1597206 | - | 303 | WP_000339144.1 | phage holin | - |
| AUC50_RS07670 () | 1597342..1597641 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| AUC50_RS07675 () | 1597687..1597851 | - | 165 | WP_016187456.1 | XkdX family protein | - |
| AUC50_RS07680 () | 1597844..1598233 | - | 390 | WP_001166606.1 | DUF2977 domain-containing protein | - |
| AUC50_RS07685 () | 1598233..1599699 | - | 1467 | WP_031584731.1 | BppU family phage baseplate upper protein | - |
| AUC50_RS07690 () | 1599699..1601609 | - | 1911 | WP_000429552.1 | hypothetical protein | - |
| AUC50_RS07695 () | 1601625..1601915 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| AUC50_RS07700 () | 1601915..1603498 | - | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| AUC50_RS07705 () | 1603507..1604331 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| AUC50_RS07710 () | 1604331..1610531 | - | 6201 | WP_060585173.1 | phage tail tape measure protein | - |
| AUC50_RS07715 () | 1610545..1610703 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| AUC50_RS07720 () | 1610745..1611095 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| AUC50_RS07725 () | 1611153..1611608 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| AUC50_RS07730 () | 1611700..1612341 | - | 642 | WP_000807540.1 | tail protein | - |
| AUC50_RS07735 () | 1612376..1612771 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| AUC50_RS07740 () | 1612772..1613173 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| AUC50_RS07745 () | 1613170..1613502 | - | 333 | WP_000395505.1 | hypothetical protein | - |
| AUC50_RS07750 () | 1613514..1613792 | - | 279 | WP_000050975.1 | head-tail connector protein | - |
| AUC50_RS07755 () | 1613861..1615024 | - | 1164 | WP_001142735.1 | phage major capsid protein | - |
| AUC50_RS07760 () | 1615036..1615809 | - | 774 | WP_000061868.1 | Clp protease ClpP | - |
| AUC50_RS07765 () | 1615793..1617031 | - | 1239 | WP_001100670.1 | phage portal protein | - |
| AUC50_RS07770 () | 1617036..1618727 | - | 1692 | WP_000153551.1 | terminase large subunit | - |
| AUC50_RS07775 () | 1618717..1619022 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| AUC50_RS07780 () | 1619150..1619464 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| AUC50_RS07785 () | 1619621..1620047 | - | 427 | Protein_1498 | transcriptional regulator | - |
| AUC50_RS07790 () | 1620060..1621427 | - | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| AUC50_RS07795 () | 1621408..1621698 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| AUC50_RS15025 () | 1621832..1621936 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| AUC50_RS07800 () | 1621948..1623438 | - | 1491 | Protein_1502 | hypothetical protein | - |
| AUC50_RS07805 () | 1623490..1623690 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| AUC50_RS07810 () | 1623758..1623910 | - | 153 | WP_000237866.1 | transcriptional activator RinB | - |
| AUC50_RS07815 () | 1623913..1624113 | - | 201 | WP_001125015.1 | hypothetical protein | - |
| AUC50_RS07820 () | 1624088..1624276 | - | 189 | WP_000195837.1 | DUF1381 domain-containing protein | - |
| AUC50_RS07825 () | 1624313..1624846 | - | 534 | WP_031913925.1 | dUTP pyrophosphatase | - |
| AUC50_RS07830 () | 1624839..1625087 | - | 249 | WP_001065072.1 | DUF1024 family protein | - |
| AUC50_RS07835 () | 1625080..1625388 | - | 309 | WP_000144708.1 | hypothetical protein | - |
| AUC50_RS07840 () | 1625385..1625732 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| AUC50_RS07845 () | 1625729..1626130 | - | 402 | WP_000695759.1 | hypothetical protein | - |
| AUC50_RS07850 () | 1626133..1626339 | - | 207 | WP_060585271.1 | hypothetical protein | - |
| AUC50_RS07855 () | 1626353..1627042 | - | 690 | WP_015994747.1 | N-6 DNA methylase | - |
| AUC50_RS07860 () | 1627039..1627239 | - | 201 | WP_015994746.1 | hypothetical protein | - |
| AUC50_RS07865 () | 1627242..1627499 | - | 258 | WP_060585274.1 | DUF3310 domain-containing protein | - |
| AUC50_RS07870 () | 1627499..1627858 | - | 360 | WP_031911823.1 | phage protein | - |
| AUC50_RS07875 () | 1627859..1628044 | - | 186 | WP_001187249.1 | DUF3113 family protein | - |
| AUC50_RS15030 () | 1628044..1628199 | - | 156 | WP_000152769.1 | hypothetical protein | - |
| AUC50_RS07880 () | 1628211..1630163 | - | 1953 | WP_076050776.1 | DNA polymerase | - |
| AUC50_RS07885 () | 1630231..1630788 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| AUC50_RS07890 () | 1630814..1631980 | - | 1167 | WP_000762545.1 | DUF2800 domain-containing protein | - |
| AUC50_RS07895 () | 1631977..1632339 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| AUC50_RS07900 () | 1632354..1632677 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| AUC50_RS07905 () | 1632756..1632917 | - | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| AUC50_RS07910 () | 1632930..1633193 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| AUC50_RS07915 () | 1633218..1633433 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| AUC50_RS07920 () | 1633488..1633853 | + | 366 | WP_016170627.1 | hypothetical protein | Antitoxin Detail |
| AUC50_RS07925 () | 1633822..1634067 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| AUC50_RS07930 () | 1634096..1634872 | - | 777 | WP_031796638.1 | Rha family transcriptional regulator | - |
| AUC50_RS07935 () | 1634895..1635122 | - | 228 | WP_015978369.1 | helix-turn-helix transcriptional regulator | - |
| AUC50_RS07940 () | 1635276..1635905 | + | 630 | WP_029549401.1 | XRE family transcriptional regulator | - |
| AUC50_RS07945 () | 1635962..1636558 | + | 597 | WP_031796639.1 | hypothetical protein | - |
| AUC50_RS07950 () | 1636788..1636934 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| AUC50_RS07955 () | 1636931..1637545 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| AUC50_RS07960 () | 1637671..1638876 | + | 1206 | WP_031585161.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| AUC50_RS07965 () | 1638919..1640946 | - | 2028 | WP_060585277.1 | hypothetical protein | - |
| AUC50_RS07970 () | 1640939..1641868 | - | 930 | WP_001825329.1 | DUF1672 domain-containing protein | - |
| AUC50_RS07975 () | 1642113..1643864 | - | 1752 | WP_000987760.1 | two-component system sensor histidine kinase SrrB | - |
| AUC50_RS07980 () | 1643845..1644570 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| AUC50_RS07985 () | 1644703..1645440 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| AUC50_RS07990 () | 1645433..1645975 | - | 543 | WP_000368650.1 | SMC-Scp complex subunit ScpB | - |
| AUC50_RS07995 () | 1645968..1646699 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| AUC50_RS08000 () | 1646791..1647297 | + | 507 | WP_001183432.1 | DUF309 domain-containing protein | - |
| AUC50_RS08005 () | 1647375..1648262 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| AUC50_RS08010 () | 1648311..1648760 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| AUC50_RS08015 () | 1648865..1649407 | - | 543 | WP_000365235.1 | NUDIX hydrolase | - |
| AUC50_RS08020 () | 1649489..1650397 | + | 909 | WP_001171344.1 | aldo/keto reductase | - |
| AUC50_RS08025 () | 1650613..1650861 | - | 249 | WP_000995803.1 | hypothetical protein | - |
| AUC50_RS08030 () | 1650877..1651632 | - | 756 | WP_000678222.1 | SDR family oxidoreductase | - |
| AUC50_RS08035 () | 1651774..1652589 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| AUC50_RS08040 () | 1652694..1653614 | - | 921 | WP_000454060.1 | ribonuclease Z | - |
| AUC50_RS08045 () | 1653927..1655411 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| AUC50_RS08050 () | 1655641..1656507 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|