MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 69868 bp
Accession: NZ_CP013613 Location: 1..69868 Organism: Pseudoalteromonas rubra strain SCSIO 6842 Replicon: plasmid pMBL6842
Accession: NZ_CP013613 Location: 1..69868 Organism: Pseudoalteromonas rubra strain SCSIO 6842 Replicon: plasmid pMBL6842
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT705_RS24430 (AT705_24430) | 498..1097 | + | 600 | WP_058798947.1 | hypothetical protein | - |
| AT705_RS24435 (AT705_24435) | 1223..1879 | + | 657 | WP_058798948.1 | hypothetical protein | - |
| AT705_RS24440 (AT705_24440) | 1952..2356 | - | 405 | WP_058798949.1 | H-NS histone family protein | - |
| AT705_RS24445 (AT705_24445) | 2417..2854 | - | 438 | WP_058798950.1 | hypothetical protein | - |
| AT705_RS24450 (AT705_24450) | 2851..3381 | - | 531 | WP_058798951.1 | hypothetical protein | - |
| AT705_RS24455 (AT705_24455) | 3568..3846 | + | 279 | WP_058798952.1 | hypothetical protein | - |
| AT705_RS24460 (AT705_24460) | 4008..10919 | + | 6912 | WP_058798953.1 | DUF4165 domain-containing protein | - |
| AT705_RS24465 (AT705_24465) | 10962..11288 | - | 327 | WP_058798954.1 | hypothetical protein | - |
| AT705_RS24470 (AT705_24470) | 11490..11990 | + | 501 | WP_058798955.1 | S26 family signal peptidase | - |
| AT705_RS24475 (AT705_24475) | 11977..13389 | + | 1413 | WP_058798956.1 | hypothetical protein | - |
| AT705_RS25470 | 13402..13548 | + | 147 | WP_157576983.1 | hypothetical protein | - |
| AT705_RS24480 (AT705_24480) | 13639..14796 | + | 1158 | WP_058798957.1 | TraU family protein | - |
| AT705_RS24485 (AT705_24485) | 14801..17962 | + | 3162 | WP_058798958.1 | conjugal transfer protein TraN | - |
| AT705_RS24490 (AT705_24490) | 17973..18866 | - | 894 | WP_058798959.1 | hypothetical protein | - |
| AT705_RS24500 (AT705_24500) | 20050..21162 | + | 1113 | WP_058798961.1 | toprim domain-containing protein | - |
| AT705_RS24505 (AT705_24505) | 21500..21763 | + | 264 | WP_058798962.1 | hypothetical protein | - |
| AT705_RS24510 (AT705_24510) | 22527..23483 | + | 957 | WP_058798963.1 | IS91 family transposase ISWz1 | Transposase |
| AT705_RS24515 (AT705_24515) | 23610..23975 | + | 366 | WP_058798964.1 | hypothetical protein | - |
| AT705_RS24520 (AT705_24520) | 23995..24291 | - | 297 | WP_058798965.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AT705_RS24525 (AT705_24525) | 24281..24541 | - | 261 | WP_058798966.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| AT705_RS24530 (AT705_24530) | 24628..25047 | - | 420 | WP_058798967.1 | Peptidoglycan-associated lipoprotein | VF |
| AT705_RS24535 (AT705_24535) | 25056..25550 | - | 495 | WP_058798968.1 | hypothetical protein | - |
| AT705_RS24540 (AT705_24540) | 25763..26728 | + | 966 | WP_058798969.1 | hypothetical protein | - |
| AT705_RS24545 (AT705_24545) | 26747..27376 | - | 630 | WP_058798970.1 | hypothetical protein | - |
| AT705_RS25550 | 27351..27647 | - | 297 | WP_167552028.1 | hypothetical protein | - |
| AT705_RS24555 (AT705_24555) | 28238..28951 | + | 714 | WP_058798972.1 | EAL domain-containing protein | - |
| AT705_RS24560 (AT705_24560) | 28948..29964 | - | 1017 | WP_058798973.1 | hypothetical protein | - |
| AT705_RS24565 (AT705_24565) | 30072..37955 | - | 7884 | WP_058798974.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AT705_RS24570 (AT705_24570) | 37958..39337 | - | 1380 | WP_058798975.1 | conjugal transfer protein TraH | - |
| AT705_RS24575 (AT705_24575) | 39334..40329 | - | 996 | WP_058798976.1 | conjugal transfer protein TraF | - |
| AT705_RS24580 (AT705_24580) | 40421..41212 | - | 792 | WP_058798977.1 | hypothetical protein | - |
| AT705_RS24585 (AT705_24585) | 41296..41880 | - | 585 | WP_058798978.1 | hypothetical protein | - |
| AT705_RS24590 (AT705_24590) | 41887..42198 | - | 312 | WP_058798979.1 | hypothetical protein | - |
| AT705_RS24595 (AT705_24595) | 42891..43658 | + | 768 | WP_058798980.1 | hypothetical protein | - |
| AT705_RS24600 (AT705_24600) | 43660..45906 | + | 2247 | WP_058798981.1 | hypothetical protein | Relaxase |
| AT705_RS24605 (AT705_24605) | 45903..47864 | + | 1962 | WP_058798982.1 | conjugative transfer system coupling protein TraD | - |
| AT705_RS24610 (AT705_24610) | 47852..49003 | + | 1152 | WP_058798983.1 | hypothetical protein | - |
| AT705_RS24615 (AT705_24615) | 49000..49647 | + | 648 | WP_058798984.1 | DUF4400 domain-containing protein | - |
| AT705_RS24620 (AT705_24620) | 49782..50132 | + | 351 | WP_058798985.1 | hypothetical protein | - |
| AT705_RS24625 (AT705_24625) | 50278..50583 | + | 306 | WP_058798986.1 | type IV conjugative transfer system protein TraL | - |
| AT705_RS24630 (AT705_24630) | 50595..51251 | + | 657 | WP_058798987.1 | hypothetical protein | - |
| AT705_RS24635 (AT705_24635) | 51265..52374 | + | 1110 | WP_058798988.1 | hypothetical protein | - |
| AT705_RS24640 (AT705_24640) | 52367..53746 | + | 1380 | WP_058798989.1 | TraB/VirB10 family protein | - |
| AT705_RS24645 (AT705_24645) | 53757..54227 | + | 471 | WP_058798990.1 | hypothetical protein | - |
| AT705_RS24650 (AT705_24650) | 54338..54532 | - | 195 | WP_058798991.1 | hypothetical protein | - |
| AT705_RS24655 (AT705_24655) | 54640..56097 | - | 1458 | WP_082669152.1 | replication initiation protein | - |
| AT705_RS24660 (AT705_24660) | 57150..57944 | + | 795 | WP_058798993.1 | thioredoxin fold domain-containing protein | - |
| AT705_RS24665 (AT705_24665) | 57941..58738 | + | 798 | WP_058798994.1 | hypothetical protein | - |
| AT705_RS24670 (AT705_24670) | 58880..59635 | + | 756 | WP_058798995.1 | TraV family lipoprotein | - |
| AT705_RS24675 (AT705_24675) | 59635..62214 | + | 2580 | WP_058798996.1 | TraC family protein | - |
| AT705_RS24680 (AT705_24680) | 62345..63070 | + | 726 | WP_157576985.1 | hypothetical protein | - |
| AT705_RS24685 (AT705_24685) | 63070..63648 | + | 579 | WP_058798998.1 | hypothetical protein | - |
| AT705_RS24690 (AT705_24690) | 63742..64359 | + | 618 | WP_058798999.1 | LPP20 family lipoprotein | - |
| AT705_RS24695 (AT705_24695) | 64396..64950 | + | 555 | WP_058799000.1 | hypothetical protein | - |
| AT705_RS24700 (AT705_24700) | 65079..66077 | - | 999 | WP_058799001.1 | hypothetical protein | - |
| AT705_RS24705 (AT705_24705) | 66077..67336 | - | 1260 | WP_058799002.1 | ParA family protein | - |
| AT705_RS25475 | 68141..68296 | + | 156 | WP_157576986.1 | hypothetical protein | - |
| AT705_RS24710 (AT705_24710) | 68454..68783 | + | 330 | WP_058799003.1 | hypothetical protein | - |
| AT705_RS24715 (AT705_24715) | 68921..69562 | + | 642 | WP_058799004.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|