MGE detailed information
MGE type: Genomic_island MGE length: 8133 bp
Accession: NZ_CP013483 Location: 4735768..4743900 Organism: Escherichia coli strain Y5 Replicon: chromosome
Accession: NZ_CP013483 Location: 4735768..4743900 Organism: Escherichia coli strain Y5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATO45_RS23345 () | 4732400..4732975 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| ATO45_RS23355 () | 4733774..4735312 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| ATO45_RS23360 () | 4735768..4736465 | - | 698 | Protein_4426 | IS1 family transposase | - |
| ATO45_RS23365 () | 4736522..4737787 | + | 1266 | Protein_4427 | cadaverine/lysine antiporter | - |
| ATO45_RS23370 () | 4737867..4740014 | + | 2148 | WP_071208579.1 | lysine decarboxylase CadA | - |
| ATO45_RS23375 () | 4740073..4741530 | + | 1458 | WP_071208580.1 | dipeptide/tripeptide permease DtpC | - |
| ATO45_RS23380 () | 4741767..4743284 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| ATO45_RS23385 () | 4743403..4743576 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| ATO45_RS23390 () | 4743604..4743900 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| ATO45_RS23400 () | 4744127..4744399 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| ATO45_RS23405 () | 4744411..4744641 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| ATO45_RS23410 () | 4744822..4746453 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| ATO45_RS23415 () | 4746450..4747169 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.008 |