MGE detailed information
MGE type: Prophage MGE length: 70129 bp
Accession: NZ_CP013481 Location: 1973710..2043838 Organism: Pandoraea apista strain DSM 16535 Replicon: chromosome
Accession: NZ_CP013481 Location: 1973710..2043838 Organism: Pandoraea apista strain DSM 16535 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT395_RS08940 () | 1969804..1970016 | + | 213 | WP_010806331.1 | 30S ribosomal protein S21 | - |
| AT395_RS08945 () | 1970176..1970649 | + | 474 | WP_042116831.1 | WbuC family cupin fold metalloprotein | - |
| AT395_RS08950 () | 1970710..1971684 | - | 975 | WP_058375312.1 | hypothetical protein | - |
| AT395_RS08955 () | 1972127..1972993 | - | 867 | WP_042116828.1 | peptidoglycan-binding protein | - |
| AT395_RS08960 () | 1973581..1974576 | + | 996 | WP_048629035.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AT395_RS08965 () | 1974573..1974881 | - | 309 | WP_048629036.1 | hypothetical protein | - |
| AT395_RS08970 () | 1975102..1975500 | - | 399 | WP_058375313.1 | hypothetical protein | - |
| AT395_RS08975 () | 1975965..1976153 | - | 189 | WP_048629038.1 | hypothetical protein | - |
| AT395_RS08985 () | 1976440..1977147 | - | 708 | WP_072632800.1 | HNH endonuclease | - |
| AT395_RS08990 () | 1977144..1978655 | - | 1512 | WP_048629040.1 | hypothetical protein | - |
| AT395_RS08995 () | 1978652..1978843 | - | 192 | WP_048629041.1 | hypothetical protein | - |
| AT395_RS09000 () | 1978845..1979375 | - | 531 | WP_048629042.1 | hypothetical protein | - |
| AT395_RS09005 () | 1979402..1979995 | - | 594 | WP_048629043.1 | hypothetical protein | - |
| AT395_RS09010 () | 1979985..1980872 | - | 888 | WP_048629044.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| AT395_RS25520 () | 1980875..1981036 | - | 162 | WP_156219709.1 | hypothetical protein | - |
| AT395_RS09015 () | 1981033..1981263 | - | 231 | WP_048629045.1 | hypothetical protein | - |
| AT395_RS09020 () | 1981256..1981654 | - | 399 | WP_048629046.1 | hypothetical protein | - |
| AT395_RS09025 () | 1981664..1982428 | - | 765 | WP_058375177.1 | hypothetical protein | - |
| AT395_RS09030 () | 1983105..1983413 | - | 309 | WP_048629048.1 | hypothetical protein | - |
| AT395_RS09035 () | 1983539..1984207 | - | 669 | WP_048629049.1 | LexA family transcriptional regulator | - |
| AT395_RS09040 () | 1984301..1984507 | + | 207 | WP_048629050.1 | hypothetical protein | - |
| AT395_RS09045 () | 1984520..1984969 | - | 450 | WP_156219710.1 | hypothetical protein | - |
| AT395_RS09050 () | 1984962..1985471 | + | 510 | WP_156219712.1 | phage regulatory CII family protein | - |
| AT395_RS09055 () | 1985606..1985905 | + | 300 | WP_048629052.1 | hypothetical protein | - |
| AT395_RS09060 () | 1985962..1986909 | + | 948 | WP_156219714.1 | hypothetical protein | - |
| AT395_RS09065 () | 1986906..1987433 | + | 528 | WP_048629053.1 | hypothetical protein | - |
| AT395_RS09070 () | 1987469..1988002 | + | 534 | WP_072632948.1 | hypothetical protein | - |
| AT395_RS09075 () | 1987999..1988571 | + | 573 | WP_048629055.1 | hypothetical protein | - |
| AT395_RS09080 () | 1988684..1988929 | + | 246 | WP_053086377.1 | hypothetical protein | - |
| AT395_RS09085 () | 1988932..1989294 | + | 363 | WP_048629056.1 | hypothetical protein | - |
| AT395_RS25525 () | 1989281..1989457 | + | 177 | WP_156219716.1 | hypothetical protein | - |
| AT395_RS09090 () | 1989462..1989719 | + | 258 | WP_048629057.1 | hypothetical protein | - |
| AT395_RS09095 () | 1989722..1989910 | + | 189 | WP_048629058.1 | hypothetical protein | - |
| AT395_RS09100 () | 1990047..1990463 | + | 417 | WP_053086378.1 | IS3 family transposase ISMxa1 | Transposase |
| AT395_RS09105 () | 1990463..1992055 | + | 1593 | WP_048629059.1 | terminase family protein | - |
| AT395_RS09110 () | 1992055..1994046 | + | 1992 | WP_048629060.1 | hypothetical protein | - |
| AT395_RS09115 () | 1994110..1994913 | + | 804 | WP_048629061.1 | hypothetical protein | - |
| AT395_RS09120 () | 1994920..1996014 | + | 1095 | WP_048629062.1 | DUF4043 family protein | - |
| AT395_RS09125 () | 1996084..1996518 | + | 435 | WP_048629063.1 | hypothetical protein | - |
| AT395_RS09130 () | 1996574..1996966 | + | 393 | WP_048629064.1 | hypothetical protein | - |
| AT395_RS09135 () | 1996979..1997314 | + | 336 | WP_048629065.1 | hypothetical protein | - |
| AT395_RS09140 () | 1997315..1997725 | + | 411 | WP_048629066.1 | hypothetical protein | - |
| AT395_RS09145 () | 1997722..1999140 | + | 1419 | WP_048629067.1 | hypothetical protein | - |
| AT395_RS09150 () | 1999140..1999514 | + | 375 | WP_048629068.1 | hypothetical protein | - |
| AT395_RS09155 () | 1999516..1999848 | + | 333 | WP_048629069.1 | hypothetical protein | - |
| AT395_RS09160 () | 1999845..2000348 | + | 504 | WP_048629070.1 | hypothetical protein | - |
| AT395_RS09165 () | 2000339..2001082 | + | 744 | WP_072632801.1 | hypothetical protein | - |
| AT395_RS09170 () | 2001088..2002380 | + | 1293 | WP_156219718.1 | hypothetical protein | - |
| AT395_RS09175 () | 2002382..2004949 | + | 2568 | WP_058375178.1 | hypothetical protein | VF |
| AT395_RS09180 () | 2005044..2007017 | + | 1974 | WP_156219720.1 | hypothetical protein | - |
| AT395_RS09185 () | 2007048..2007377 | + | 330 | WP_048629075.1 | hypothetical protein | - |
| AT395_RS09190 () | 2007374..2007667 | + | 294 | WP_048629076.1 | hypothetical protein | - |
| AT395_RS09195 () | 2007654..2008109 | + | 456 | WP_048629077.1 | DUF882 domain-containing protein | - |
| AT395_RS09200 () | 2008106..2008408 | + | 303 | WP_048629078.1 | hypothetical protein | - |
| AT395_RS09205 () | 2008332..2008574 | + | 243 | WP_048629079.1 | hypothetical protein | - |
| AT395_RS09215 () | 2008868..2009503 | + | 636 | WP_156890205.1 | hypothetical protein | - |
| AT395_RS25530 () | 2009512..2009772 | - | 261 | WP_156219724.1 | hypothetical protein | - |
| AT395_RS09225 () | 2009771..2009965 | + | 195 | WP_048629083.1 | hypothetical protein | - |
| AT395_RS09230 () | 2009962..2011335 | + | 1374 | WP_048629084.1 | replicative DNA helicase | - |
| AT395_RS09240 () | 2011655..2011993 | + | 339 | WP_048629174.1 | DUF1064 domain-containing protein | - |
| AT395_RS09245 () | 2011990..2012307 | + | 318 | WP_048629085.1 | hypothetical protein | - |
| AT395_RS09250 () | 2012304..2012702 | + | 399 | WP_082164792.1 | hypothetical protein | - |
| AT395_RS09260 () | 2012893..2013270 | + | 378 | WP_072632803.1 | hypothetical protein | - |
| AT395_RS09270 () | 2013901..2014176 | + | 276 | WP_048629088.1 | hypothetical protein | - |
| AT395_RS09275 () | 2014184..2014765 | + | 582 | WP_048629089.1 | phage tail protein | - |
| AT395_RS09280 () | 2015376..2015969 | + | 594 | WP_048629090.1 | hypothetical protein | - |
| AT395_RS09285 () | 2016022..2018058 | + | 2037 | WP_072632805.1 | phage terminase large subunit family protein | - |
| AT395_RS09290 () | 2018066..2018311 | + | 246 | WP_048629091.1 | hypothetical protein | - |
| AT395_RS09295 () | 2018311..2019990 | + | 1680 | WP_048629092.1 | phage portal protein | - |
| AT395_RS09300 () | 2019987..2020865 | + | 879 | WP_048629093.1 | S49 family peptidase | - |
| AT395_RS09305 () | 2020894..2021550 | + | 657 | WP_048629094.1 | hypothetical protein | - |
| AT395_RS09310 () | 2021581..2022228 | + | 648 | WP_048629095.1 | head decoration protein | - |
| AT395_RS09315 () | 2022299..2023336 | + | 1038 | WP_048629096.1 | major capsid protein | - |
| AT395_RS09320 () | 2023337..2023669 | + | 333 | WP_048629097.1 | hypothetical protein | - |
| AT395_RS09325 () | 2023666..2024229 | + | 564 | WP_048629098.1 | hypothetical protein | - |
| AT395_RS09330 () | 2024239..2024427 | + | 189 | WP_048629099.1 | DUF2635 domain-containing protein | - |
| AT395_RS09335 () | 2024491..2025984 | + | 1494 | WP_048629100.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| AT395_RS09340 () | 2026040..2026414 | + | 375 | WP_010804675.1 | phage tail tube protein | - |
| AT395_RS09345 () | 2026417..2026707 | + | 291 | WP_048629101.1 | phage tail assembly protein | - |
| AT395_RS09350 () | 2026707..2026829 | + | 123 | WP_082164800.1 | GpE family phage tail protein | - |
| AT395_RS09355 () | 2026829..2028820 | + | 1992 | WP_048629102.1 | transglycosylase SLT domain-containing protein | - |
| AT395_RS09360 () | 2028907..2030292 | + | 1386 | WP_156219735.1 | DNA circularization N-terminal domain-containing protein | - |
| AT395_RS09365 () | 2030386..2030811 | - | 426 | WP_082164793.1 | Arc family DNA-binding protein | - |
| AT395_RS09370 () | 2030947..2031117 | + | 171 | WP_156219726.1 | Arc family DNA-binding protein | - |
| AT395_RS09375 () | 2031143..2032060 | + | 918 | WP_053086379.1 | phage antirepressor N-terminal domain-containing protein | - |
| AT395_RS09380 () | 2032091..2032594 | - | 504 | WP_048629106.1 | hypothetical protein | - |
| AT395_RS09385 () | 2032612..2033703 | + | 1092 | WP_048629107.1 | Mu P family protein | - |
| AT395_RS09390 () | 2033700..2034329 | + | 630 | WP_048629108.1 | phage baseplate assembly protein V | - |
| AT395_RS09395 () | 2034387..2034830 | + | 444 | WP_048629109.1 | phage GP46 family protein | - |
| AT395_RS09400 () | 2034830..2035942 | + | 1113 | WP_048629110.1 | baseplate J/gp47 family protein | - |
| AT395_RS09405 () | 2035951..2036547 | + | 597 | WP_048629111.1 | DUF2313 domain-containing protein | - |
| AT395_RS09410 () | 2036558..2037832 | + | 1275 | WP_156219728.1 | hypothetical protein | - |
| AT395_RS09415 () | 2037836..2038411 | + | 576 | WP_058375181.1 | DUF4376 domain-containing protein | - |
| AT395_RS09420 () | 2038434..2038970 | + | 537 | WP_048629114.1 | glycoside hydrolase family 104 protein | - |
| AT395_RS09425 () | 2038985..2039278 | + | 294 | WP_048629115.1 | holin | - |
| AT395_RS09430 () | 2039334..2039849 | + | 516 | WP_048629116.1 | hypothetical protein | - |
| AT395_RS09435 () | 2039846..2040040 | + | 195 | WP_048629117.1 | hypothetical protein | - |
| AT395_RS09440 () | 2040109..2040351 | + | 243 | WP_124988637.1 | hypothetical protein | - |
| AT395_RS09445 () | 2040362..2040787 | + | 426 | WP_048629119.1 | hypothetical protein | - |
| AT395_RS09450 () | 2040784..2041146 | + | 363 | WP_048629120.1 | DUF1353 domain-containing protein | - |
| AT395_RS09455 () | 2041246..2042001 | - | 756 | WP_048629121.1 | SOS response-associated peptidase family protein | - |
| AT395_RS09465 () | 2042437..2042841 | - | 405 | WP_048629123.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AT395_RS09470 () | 2042916..2043095 | - | 180 | WP_048629124.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AT395_RS09475 () | 2043209..2043838 | + | 630 | WP_048629125.1 | SOS response-associated peptidase family protein | - |
| AT395_RS09485 () | 2044153..2045268 | - | 1116 | WP_042115266.1 | YeeE/YedE family protein | - |
| AT395_RS09490 () | 2045600..2046319 | - | 720 | WP_094068917.1 | tol-pal system protein YbgF | - |
| AT395_RS09495 () | 2046354..2046854 | - | 501 | WP_042115270.1 | OmpA family protein | - |
| AT395_RS09500 () | 2046885..2048177 | - | 1293 | WP_042115272.1 | Tol-Pal system protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|