NZ_CP0133691..258679

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 258679 bp
Accession: NZ_CP013369        Location: 1..258679         Organism: Burkholderia ubonensis strain RF23-BP41       Replicon: plasmid pRF23


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
WI31_RS03535 () 1..198 + 198 WP_059673701.1 hypothetical protein -
WI31_RS36360 () 721..867 + 147 WP_155122795.1 hypothetical protein -
WI31_RS03540 () 931..1272 - 342 WP_059652211.1 hypothetical protein -
WI31_RS03545 () 1277..1549 - 273 WP_059652214.1 hypothetical protein -
WI31_RS03550 () 1799..2857 - 1059 WP_059652216.1 hypothetical protein -
WI31_RS03555 () 3169..3852 - 684 WP_080402090.1 hypothetical protein -
WI31_RS03560 () 3998..4363 + 366 WP_034184980.1 hypothetical protein -
WI31_RS03565 () 4360..5922 - 1563 WP_069275252.1 IS66 family transposase ISBcen14 Transposase
WI31_RS03570 () 5952..6299 - 348 WP_034184982.1 IS66 family transposase ISBcen14 Transposase
WI31_RS03575 () 6296..6703 - 408 WP_059655039.1 IS66 family transposase ISCfr14 Transposase
WI31_RS03585 () 7485..8683 + 1199 WP_088503120.1 IS3 family transposase ISButh1 Transposase
WI31_RS36365 () 8728..9573 - 846 WP_155122796.1 hypothetical protein -
WI31_RS36370 () 9670..10908 - 1239 WP_155122797.1 hypothetical protein -
WI31_RS03590 () 11447..11803 - 357 WP_059655043.1 hypothetical protein -
WI31_RS03595 () 12137..12574 - 438 WP_059673668.1 hypothetical protein -
WI31_RS03605 () 12883..13803 - 921 WP_059655049.1 hypothetical protein -
WI31_RS03610 () 13865..14521 - 657 WP_059655051.1 hypothetical protein -
WI31_RS03615 () 15248..15967 + 720 WP_059673670.1 hypothetical protein -
WI31_RS36375 () 17191..17499 - 309 WP_155122798.1 hypothetical protein -
WI31_RS03620 () 17503..22017 - 4515 WP_080402154.1 RHS domain-containing protein -
WI31_RS03625 () 22033..23298 - 1266 WP_059655055.1 hypothetical protein -
WI31_RS03630 () 23314..25518 - 2205 WP_059655057.1 Actin cross-linking toxin VgrG1 VF
WI31_RS03635 () 25968..28307 - 2340 WP_059655093.1 IS91 family transposase ISAzo26 Transposase
WI31_RS03640 () 28334..29503 - 1170 WP_059673672.1 DUF4935 domain-containing protein -
WI31_RS03645 () 29531..29716 - 186 WP_080402156.1 hypothetical protein -
WI31_RS03650 () 29773..30708 - 936 WP_059655063.1 serine protease -
WI31_RS03655 () 31378..31623 + 246 WP_059655095.1 type II toxin-antitoxin system ParD family antitoxin Antitoxin Detail
WI31_RS03660 () 31613..31912 + 300 WP_059655065.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
WI31_RS03665 () 31963..32319 + 357 WP_059655067.1 hypothetical protein -
WI31_RS03670 () 33374..34342 - 969 WP_059655069.1 ParB/RepB/Spo0J family partition protein -
WI31_RS03675 () 34339..35547 - 1209 WP_059618340.1 Sporulation initiation inhibitor protein Soj VF
WI31_RS03680 () 36372..37754 + 1383 WP_059655071.1 replication initiation protein -
WI31_RS03685 () 38397..39398 - 1002 WP_059655073.1 patatin-like phospholipase family protein -
WI31_RS03690 () 39825..41024 - 1200 WP_059655075.1 nucleotidyltransferase -
WI31_RS03695 () 41145..41495 + 351 WP_059655076.1 helix-turn-helix domain-containing protein -
WI31_RS03700 () 41492..42364 + 873 WP_157380056.1 ImmA/IrrE family metallo-endopeptidase -
WI31_RS03705 () 43216..43776 + 561 WP_157380057.1 hypothetical protein -
WI31_RS03710 () 44312..46435 - 2124 WP_059655082.1 tyrosine-type recombinase/integrase -
WI31_RS03715 () 47212..47838 + 627 WP_155122799.1 hypothetical protein -
WI31_RS03720 () 48211..50172 - 1962 WP_059655086.1 putative DNA binding domain-containing protein -
WI31_RS03725 () 50696..51151 - 456 Protein_40 IS3 family transposase ISBxe2 Transposase
WI31_RS03730 () 51154..51426 + 273 Protein_41 IS110 family transposase -
WI31_RS03735 () 51676..52131 - 456 WP_059636632.1 spore coat U domain-containing protein -
WI31_RS03740 () 52128..54518 - 2391 WP_059636629.1 fimbrial biogenesis outer membrane usher protein -
WI31_RS03745 () 54537..55268 - 732 WP_059636627.1 molecular chaperone -
WI31_RS03750 () 55272..55853 - 582 WP_080400280.1 spore coat U domain-containing protein -
WI31_RS03755 () 56721..57926 + 1206 WP_059673678.1 IS110 family transposase ISBma3 Transposase
WI31_RS36380 () 58109..58285 + 177 WP_155122800.1 hypothetical protein -
WI31_RS03770 () 60118..61674 + 1557 WP_088500578.1 putative cyclic di-GMP phosphodiesterase PdeN VF
WI31_RS34960 () 61780..62034 - 255 WP_080402097.1 H-NS histone family protein -
WI31_RS36385 () 62293..62658 - 366 WP_155122801.1 hypothetical protein -
WI31_RS03775 () 62747..62971 + 225 WP_155122802.1 ISNCY family transposase ISKpn21 Transposase
WI31_RS34965 () 62947..63524 + 578 Protein_53 IS3 family transposase ISBvi3 Transposase
WI31_RS03785 () 63568..64437 - 870 WP_059652453.1 LysR family transcriptional regulator -
WI31_RS03790 () 64660..65409 - 750 Protein_55 IS21 family transposase IS408 Transposase
WI31_RS03795 () 65626..66888 + 1263 WP_059652450.1 NarK/NasA family nitrate transporter -
WI31_RS03800 () 66962..68347 + 1386 WP_059652447.1 NarK family nitrate/nitrite MFS transporter -
WI31_RS03805 () 68546..72271 + 3726 WP_059652444.1 nitrate reductase subunit alpha -
WI31_RS03810 () 72268..73821 + 1554 WP_059652441.1 nitrate reductase subunit beta -
WI31_RS03815 () 73848..74528 + 681 WP_059652459.1 nitrate reductase molybdenum cofactor assembly chaperone -
WI31_RS03820 () 74525..75208 + 684 WP_059652438.1 respiratory nitrate reductase subunit gamma -
WI31_RS03825 () 75353..77302 + 1950 WP_059636605.1 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein -
WI31_RS03830 () 77337..78014 + 678 WP_059636603.1 Transcriptional regulatory protein LiaR VF
WI31_RS03835 () 78026..78457 + 432 WP_059652435.1 MarR family transcriptional regulator -
WI31_RS36390 () 78476..78844 - 369 WP_155122803.1 hypothetical protein -
WI31_RS03845 () 79225..82383 + 3159 WP_080402096.1 autotransporter outer membrane beta-barrel domain-containing protein -
WI31_RS36395 () 82482..83140 - 659 Protein_67 transposase family protein -
WI31_RS36400 () 83168..83380 - 213 WP_155122804.1 hypothetical protein -
WI31_RS03855 () 83411..84466 - 1056 WP_059652426.1 acyltransferase -
WI31_RS03860 () 84493..85497 - 1005 Protein_70 hypothetical protein -
WI31_RS03865 () 85487..86755 - 1269 WP_059652418.1 polysaccharide biosynthesis protein -
WI31_RS03870 () 86902..87219 - 318 Protein_72 IS5 family transposase ISBmu23 Transposase
WI31_RS03875 () 87228..88382 - 1155 WP_059652412.1 polysaccharide pyruvyl transferase family protein -
WI31_RS03880 () 88379..89623 - 1245 WP_059652409.1 glycosyltransferase -
WI31_RS03885 () 89620..91917 - 2298 WP_059652406.1 Putative tyrosine-protein kinase in cps region VF
WI31_RS03890 () 91922..92458 - 537 WP_059636582.1 Low molecular weight protein-tyrosine-phosphatase Ptp VF
WI31_RS03895 () 92455..93609 - 1155 WP_059652403.1 hypothetical protein VF
WI31_RS03900 () 93641..95056 - 1416 WP_059652400.1 UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase VF
WI31_RS03905 () 95849..96589 + 741 WP_059636733.1 aquaporin Z -
WI31_RS03915 () 97220..99790 + 2571 WP_080402095.1 Sensor protein EvgS VF
WI31_RS03920 () 100017..100721 - 705 WP_059636727.1 Transcriptional regulatory protein RcsB VF
WI31_RS36405 () 101477..101626 - 150 WP_155122805.1 hypothetical protein -
WI31_RS03925 () 101742..102596 + 855 WP_080400360.1 carbonic anhydrase family protein -
WI31_RS03930 () 103012..103542 + 531 WP_059636571.1 Protein FimF VF
WI31_RS03935 () 103641..104411 + 771 WP_059636569.1 putative fimbrial chaperone LpfB VF
WI31_RS03940 () 104418..106988 + 2571 WP_080401585.1 Outer membrane usher protein SfmD VF
WI31_RS03945 () 106985..107950 + 966 WP_155122806.1 Type-1 fimbrial protein, A chain VF
WI31_RS36410 () 108205..108453 + 249 WP_059673662.1 hypothetical protein -
WI31_RS03950 () 108557..108916 + 360 WP_059652384.1 Outer membrane protein P5 VF
WI31_RS03955 () 109577..112933 + 3357 WP_059673660.1 Autotransporter adhesin UpaG VF
WI31_RS03960 () 113747..114109 + 363 WP_059638503.1 hypothetical protein -
WI31_RS03965 () 114367..115029 + 663 WP_059638497.1 Transcriptional regulatory protein RcsB VF
WI31_RS03970 () 115029..118295 + 3267 WP_059638496.1 response regulator -
WI31_RS03975 () 118562..119461 + 900 WP_063803181.1 putative signaling protein VF
WI31_RS03980 () 119807..120232 - 426 WP_059638495.1 ISNCY family transposase ISRel10 Transposase
WI31_RS03985 () 120888..121940 - 1053 WP_059652182.1 fimbrial protein -
WI31_RS03990 () 122007..124598 - 2592 WP_080402084.1 Outer membrane usher protein HtrE VF
WI31_RS03995 () 124783..125556 - 774 WP_080400634.1 putative fimbrial chaperone YadV VF
WI31_RS04000 () 125646..126176 - 531 WP_059638489.1 Major fimbrial subunit SMF-1 VF
WI31_RS04005 () 126397..126654 - 258 WP_059638487.1 hypothetical protein -
WI31_RS04010 () 126773..127087 - 315 WP_059638485.1 hypothetical protein -
WI31_RS04015 () 127191..129326 - 2136 WP_059652179.1 peptidase domain-containing ABC transporter -
WI31_RS04020 () 129393..130655 - 1263 WP_059638481.1 HlyD family secretion protein -
WI31_RS04025 () 130691..131995 - 1305 WP_059652189.1 TolC family outer membrane protein -
WI31_RS37410 () 131907..132158 + 252 WP_196222304.1 hypothetical protein -
WI31_RS04030 () 132168..132809 - 642 WP_059638479.1 Transcriptional regulatory protein RcsB VF
WI31_RS36415 () 132926..133348 - 423 WP_155122807.1 hypothetical protein -
WI31_RS04035 () 133468..137211 - 3744 WP_080402083.1 Virulence sensor protein BvgS VF
WI31_RS04045 () 137214..137840 - 627 WP_059638473.1 response regulator -
WI31_RS34980 () 139163..140653 - 1491 WP_080402082.1 FAD/NAD(P)-binding protein -
WI31_RS34985 () 140690..141796 - 1107 WP_088503030.1 hypothetical protein -
WI31_RS36420 () 142025..142129 + 105 Protein_112 IS3 family transposase ISMca4 Transposase
WI31_RS04060 () 142184..143232 + 1049 Protein_113 IS3 family transposase ISBvi3 Transposase
WI31_RS34990 () 143239..144368 - 1130 Protein_114 IS3 family transposase ISDet2 Transposase
WI31_RS04075 () 144434..144586 + 153 Protein_115 IS3 family transposase ISBvi3 Transposase
WI31_RS04080 () 144616..145485 + 870 Protein_116 IS5 family transposase ISButh5 Transposase
WI31_RS36425 () 146041..146250 - 210 WP_155122808.1 hypothetical protein -
WI31_RS04085 () 146295..146810 + 516 WP_059652960.1 arsenate reductase (azurin) small subunit -
WI31_RS04090 () 146822..149311 + 2490 WP_059652773.1 arsenate reductase (azurin) large subunit -
WI31_RS04095 () 149452..149793 + 342 WP_059652775.1 metalloregulator ArsR/SmtB family transcription factor -
WI31_RS04100 () 149790..150269 + 480 WP_059652779.1 VOC family protein -
WI31_RS04105 () 150279..150773 + 495 WP_059652782.1 arsenate reductase ArsC -
WI31_RS04110 () 150790..151284 + 495 WP_059652786.1 arsenate reductase ArsC -
WI31_RS04115 () 151350..152420 + 1071 WP_059652788.1 ACR3 family arsenite efflux transporter -
WI31_RS34995 () 152441..152695 + 255 Protein_125 arsenate reductase -
WI31_RS04120 () 153458..154315 - 858 WP_059652792.1 hypothetical protein -
WI31_RS04125 () 154564..155292 - 729 WP_059652795.1 hypothetical protein -
WI31_RS35000 () 155765..158452 - 2688 WP_080402103.1 Autotransporter adhesin SadA VF
WI31_RS04140 () 158594..158857 - 264 WP_063803240.1 hypothetical protein -
WI31_RS04145 () 158899..160200 - 1302 WP_059652803.1 DUF1173 domain-containing protein -
WI31_RS04150 () 160200..161639 - 1440 WP_059652806.1 zeta toxin family protein -
WI31_RS04155 () 161652..161918 - 267 WP_059652809.1 hypothetical protein -
WI31_RS04160 () 161930..162127 - 198 WP_059652812.1 hypothetical protein -
WI31_RS04165 () 162139..162486 - 348 WP_059652815.1 hypothetical protein -
WI31_RS04170 () 162594..162974 + 381 WP_059652818.1 hypothetical protein -
WI31_RS04175 () 162967..166053 - 3087 WP_059652820.1 conjugal transfer protein TraG N-terminal domain-containing protein -
WI31_RS04180 () 166064..167533 - 1470 WP_059652824.1 conjugal transfer protein TraH -
WI31_RS04185 () 167526..168626 - 1101 WP_080402104.1 phage Gp37/Gp68 family protein -
WI31_RS04190 () 168623..168976 - 354 WP_042585055.1 hypothetical protein -
WI31_RS04195 () 168979..169434 - 456 WP_059652830.1 Lar family restriction alleviation protein -
WI31_RS04200 () 169431..169859 - 429 WP_059652832.1 HNH endonuclease -
WI31_RS04205 () 169856..170167 - 312 WP_088503117.1 hypothetical protein -
WI31_RS04210 () 170201..170767 - 567 WP_155122809.1 hypothetical protein -
WI31_RS04215 () 170890..171744 - 855 WP_059652841.1 conjugal transfer protein TraF -
WI31_RS04220 () 171748..172074 - 327 WP_059652965.1 hypothetical protein -
WI31_RS04225 () 172128..172439 - 312 WP_059652844.1 hypothetical protein -
WI31_RS37415 () 172436..172789 - 354 WP_196222301.1 hypothetical protein -
WI31_RS04230 () 172779..173204 - 426 WP_059652847.1 hypothetical protein -
WI31_RS04235 () 173207..174412 - 1206 WP_080402110.1 conjugal transfer protein TraN -
WI31_RS04240 () 174492..175550 - 1059 WP_059652850.1 hypothetical protein -
WI31_RS04245 () 175615..175992 - 378 WP_059652853.1 hypothetical protein -
WI31_RS04250 () 175994..176710 - 717 WP_059652856.1 type-F conjugative transfer system pilin assembly protein TrbC -
WI31_RS04255 () 176707..177741 - 1035 WP_059652859.1 TraU family protein -
WI31_RS04260 () 177741..178397 - 657 WP_059652862.1 type-F conjugative transfer system protein TraW -
WI31_RS04265 () 178384..178854 - 471 WP_059652972.1 signal peptidase I -
WI31_RS04270 () 178920..179123 - 204 WP_059652865.1 hypothetical protein -
WI31_RS04275 () 179116..179775 - 660 WP_059652975.1 FadR family transcriptional regulator -
WI31_RS04280 () 179884..180378 - 495 WP_059652868.1 Phospholipase D VF
WI31_RS04285 () 180477..181142 - 666 WP_059652869.1 hypothetical protein -
WI31_RS04290 () 181139..181885 - 747 WP_059652872.1 hypothetical protein -
WI31_RS04295 () 181882..182310 - 429 Protein_161 hypothetical protein -
WI31_RS04300 () 182376..184979 - 2604 WP_080402105.1 type IV secretion system protein TraC -
WI31_RS04305 () 184993..185649 - 657 WP_059652878.1 TraV family lipoprotein -
WI31_RS04310 () 185646..186443 - 798 WP_059652881.1 DsbC family protein -
WI31_RS04315 () 186436..187836 - 1401 WP_059652883.1 TraB/VirB10 family protein -
WI31_RS04320 () 187829..188557 - 729 WP_080402106.1 type-F conjugative transfer system secretin TraK -
WI31_RS04325 () 188496..189086 - 591 WP_059652885.1 conjugal transfer protein TraE -
WI31_RS04330 () 189090..189383 - 294 WP_059652889.1 type IV conjugative transfer system protein TraL -
WI31_RS04335 () 189394..189753 - 360 WP_059652892.1 hypothetical protein -
WI31_RS04340 () 190116..190553 - 438 WP_059652895.1 hypothetical protein VF
WI31_RS04345 () 191303..191638 - 336 WP_155122810.1 hypothetical protein -
WI31_RS04350 () 191786..192811 - 1026 WP_059652901.1 extracellular solute-binding protein -
WI31_RS04355 () 192808..194574 - 1767 WP_059652984.1 ABC transporter permease subunit -
WI31_RS04360 () 194829..195257 + 429 WP_059652904.1 GNAT family N-acetyltransferase -
WI31_RS04365 () 195260..196267 + 1008 WP_059652908.1 AraC family transcriptional regulator -
WI31_RS04370 () 196386..199208 - 2823 WP_059652911.1 Multifunctional conjugation protein TraI Relaxase
WI31_RS04375 () 199220..199573 - 354 WP_059652988.1 protein-disulfide reductase DsbD N-terminal domain-containing protein -
WI31_RS04380 () 199700..201607 - 1908 WP_059652913.1 type IV secretion system DNA-binding domain-containing protein -
WI31_RS04385 () 201604..202050 - 447 WP_080402108.1 hypothetical protein -
WI31_RS04390 () 203605..203907 + 303 WP_059652919.1 hypothetical protein -
WI31_RS37420 () 204139..204393 - 255 WP_196222302.1 hypothetical protein -
WI31_RS37425 () 204413..204583 - 171 WP_175550680.1 hypothetical protein -
WI31_RS04400 () 204594..204833 - 240 WP_059652926.1 DUF3717 domain-containing protein -
WI31_RS04405 () 204891..205730 - 840 WP_059652929.1 hypothetical protein -
WI31_RS04410 () 205793..206140 - 348 WP_059652933.1 hypothetical protein -
WI31_RS04415 () 206208..206486 - 279 WP_059652936.1 hypothetical protein -
WI31_RS36430 () 206532..207068 - 537 WP_155122811.1 hypothetical protein -
WI31_RS35015 () 207080..207268 - 189 WP_080402113.1 hypothetical protein -
WI31_RS04425 () 208088..210175 - 2088 WP_080402109.1 ParB/RepB/Spo0J family partition protein -
WI31_RS36435 () 210798..211130 - 333 WP_063803238.1 hypothetical protein -
WI31_RS36440 () 211133..211297 - 165 WP_155122812.1 hypothetical protein -
WI31_RS04435 () 211355..211864 - 510 WP_059652941.1 hypothetical protein -
WI31_RS04440 () 211898..212539 - 642 WP_059593227.1 DNA methylase -
WI31_RS04445 () 212954..213427 - 474 WP_059652945.1 hypothetical protein -
WI31_RS04450 () 213487..214152 - 666 WP_059652948.1 hypothetical protein -
WI31_RS04455 () 214221..215048 - 828 WP_059652951.1 DUF945 domain-containing protein -
WI31_RS04460 () 215663..215983 - 321 WP_059652954.1 hypothetical protein -
WI31_RS04465 () 216043..217998 - 1956 WP_059652995.1 DNA cytosine methyltransferase -
WI31_RS04470 () 218053..218853 - 801 WP_063803239.1 DUF3560 domain-containing protein -
WI31_RS37430 () 219344..219784 + 441 WP_059653002.1 hypothetical protein -
WI31_RS04480 () 219804..220265 + 462 WP_059652957.1 hypothetical protein -
WI31_RS04485 () 220474..220971 - 498 Protein_202 ISNCY family transposase ISKpn21 Transposase
WI31_RS04495 () 221026..222224 + 1199 WP_088503032.1 IS3 family transposase ISBvi3 Transposase
WI31_RS04500 () 222251..223165 - 915 Protein_204 ISNCY family transposase ISKpn21 Transposase
WI31_RS04505 () 224493..225548 + 1056 WP_059652194.1 hypothetical protein -
WI31_RS04510 () 225723..229196 + 3474 WP_059652195.1 hypothetical protein -
WI31_RS04515 () 229266..234047 + 4782 WP_059652197.1 hypothetical protein -
WI31_RS04520 () 234142..238587 + 4446 WP_059652199.1 Mono(ADP-ribosyl)transferase SpvB VF
WI31_RS04525 () 238625..241552 + 2928 WP_059652201.1 RHS repeat protein -
WI31_RS36445 () 241864..242034 + 171 WP_155122813.1 hypothetical protein -
WI31_RS04530 () 242073..244895 + 2823 WP_059652203.1 RHS repeat protein -
WI31_RS35035 () 245490..247157 + 1668 WP_080402088.1 hypothetical protein VF
WI31_RS04535 () 247254..250064 + 2811 WP_059737054.1 RHS repeat protein -
WI31_RS04540 () 250172..250864 - 693 Protein_214 IS66 family transposase ISBcen19 Transposase
WI31_RS35040 () 251115..251366 - 252 WP_080402089.1 PAAR domain-containing protein -
WI31_RS36450 () 251522..252568 - 1047 WP_155122814.1 hypothetical protein -
WI31_RS04550 () 252565..255780 - 3216 WP_196222303.1 lytic transglycosylase domain-containing protein -
WI31_RS04555 () 255834..258341 - 2508 WP_059652209.1 type VI secretion system tip protein VgrG -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance