MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 72431 bp
Accession: NZ_CP013341 Location: 1662751..1735181 Organism: Nitrosomonas ureae strain Nm10 Replicon: chromosome
Accession: NZ_CP013341 Location: 1662751..1735181 Organism: Nitrosomonas ureae strain Nm10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATY38_RS07565 () | 1659034..1659645 | + | 612 | WP_201011881.1 | ubiquinol-cytochrome c reductase iron-sulfur subunit | - |
| ATY38_RS07570 () | 1659646..1660893 | + | 1248 | WP_062558771.1 | cytochrome bc complex cytochrome b subunit | - |
| ATY38_RS07575 () | 1660898..1661611 | + | 714 | WP_062558772.1 | cytochrome c1 | - |
| ATY38_RS07580 () | 1661661..1662260 | + | 600 | WP_062558773.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| ATY38_RS07585 () | 1662257..1662679 | + | 423 | WP_062558774.1 | ClpXP protease specificity-enhancing factor | - |
| ATY38_RS07595 () | 1662966..1664042 | + | 1077 | WP_062558775.1 | IS5 family transposase | - |
| ATY38_RS07600 () | 1664133..1665131 | - | 999 | WP_062558776.1 | site-specific integrase | - |
| ATY38_RS15765 () | 1665386..1665799 | - | 414 | Protein_1498 | conjugal transfer protein TraM | - |
| ATY38_RS07605 () | 1665796..1666527 | - | 732 | WP_062558777.1 | conjugal transfer protein TraL | - |
| ATY38_RS07610 () | 1666527..1666850 | - | 324 | WP_062558778.1 | hypothetical protein | - |
| ATY38_RS07615 () | 1667198..1667566 | + | 369 | WP_143023495.1 | conjugal transfer transcriptional regulator TraJ | - |
| ATY38_RS07620 () | 1667609..1669273 | + | 1665 | WP_062558779.1 | relaxase/mobilization nuclease domain-containing protein | - |
| ATY38_RS07625 () | 1669273..1671117 | + | 1845 | WP_062558780.1 | type IV secretory system conjugative DNA transfer family protein | - |
| ATY38_RS07630 () | 1671147..1671689 | + | 543 | WP_062558781.1 | conjugative transfer signal peptidase TraF | - |
| ATY38_RS07635 () | 1671715..1671933 | + | 219 | WP_062558782.1 | hypothetical protein | - |
| ATY38_RS07640 () | 1671920..1674757 | + | 2838 | WP_062558783.1 | DUF1738 domain-containing protein | - |
| ATY38_RS07645 () | 1674778..1675893 | + | 1116 | WP_062558784.1 | hypothetical protein | - |
| ATY38_RS07650 () | 1675972..1676274 | + | 303 | WP_062558785.1 | helix-turn-helix domain-containing protein | - |
| ATY38_RS07655 () | 1676271..1676522 | + | 252 | WP_062558786.1 | HipA N-terminal domain-containing protein | - |
| ATY38_RS07660 () | 1677161..1677361 | + | 201 | WP_062558787.1 | hypothetical protein | - |
| ATY38_RS07665 () | 1677358..1678299 | + | 942 | WP_062558788.1 | DUF4007 family protein | - |
| ATY38_RS07670 () | 1678296..1681799 | + | 3504 | WP_062558789.1 | hypothetical protein | - |
| ATY38_RS07675 () | 1681789..1682580 | + | 792 | WP_062558790.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| ATY38_RS07680 () | 1682652..1684532 | + | 1881 | WP_062558791.1 | hypothetical protein | - |
| ATY38_RS07685 () | 1684532..1686049 | + | 1518 | WP_062558792.1 | hypothetical protein | - |
| ATY38_RS07690 () | 1686046..1691457 | + | 5412 | WP_062558793.1 | DNA translocase FtsK | - |
| ATY38_RS07695 () | 1691667..1694216 | - | 2550 | WP_062558794.1 | DNA phosphorothioation-associated putative methyltransferase | - |
| ATY38_RS07700 () | 1694415..1694786 | - | 372 | WP_074701941.1 | conjugal transfer protein TraO | - |
| ATY38_RS07705 () | 1694826..1695881 | - | 1056 | WP_062558796.1 | ParB/RepB/Spo0J family partition protein | - |
| ATY38_RS07710 () | 1696365..1696730 | + | 366 | WP_062558797.1 | helix-turn-helix domain-containing protein | - |
| ATY38_RS07715 () | 1696838..1697803 | + | 966 | WP_062558798.1 | P-type conjugative transfer ATPase TrbB | - |
| ATY38_RS07720 () | 1697825..1698214 | + | 390 | WP_082633016.1 | TrbC/VirB2 family protein | - |
| ATY38_RS07725 () | 1698226..1698537 | + | 312 | WP_062558799.1 | conjugal transfer protein TrbD | - |
| ATY38_RS07730 () | 1698534..1701071 | + | 2538 | WP_062558800.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| ATY38_RS07735 () | 1701068..1701832 | + | 765 | Protein_1525 | conjugal transfer protein TrbF | - |
| ATY38_RS07740 () | 1701847..1702122 | + | 276 | Protein_1526 | P-type conjugative transfer protein TrbG | - |
| ATY38_RS07745 () | 1702260..1703426 | + | 1167 | WP_062558265.1 | IS4 family transposase | - |
| ATY38_RS07750 () | 1703940..1707755 | + | 3816 | WP_062558802.1 | S8 family serine peptidase | - |
| ATY38_RS07760 () | 1708400..1708639 | + | 240 | WP_062558804.1 | Arc family DNA-binding protein | - |
| ATY38_RS07765 () | 1708636..1709056 | + | 421 | Protein_1530 | type II toxin-antitoxin system VapC family toxin | - |
| ATY38_RS15460 () | 1709187..1710358 | - | 1172 | Protein_1531 | IS3 family transposase | - |
| ATY38_RS07780 () | 1710642..1718183 | + | 7542 | WP_082633017.1 | insecticidal toxin complex protein | - |
| ATY38_RS07785 () | 1718524..1718703 | + | 180 | WP_062558806.1 | hypothetical protein | - |
| ATY38_RS07790 () | 1718774..1728217 | + | 9444 | WP_062558807.1 | hypothetical protein | - |
| ATY38_RS07795 () | 1728264..1731830 | - | 3567 | WP_062558808.1 | DUF1929 domain-containing protein | - |
| ATY38_RS16060 () | 1732181..1732327 | - | 147 | WP_158441765.1 | transposase | - |
| ATY38_RS16065 () | 1732333..1732617 | + | 285 | WP_062558809.1 | hypothetical protein | - |
| ATY38_RS07805 () | 1732795..1733637 | + | 843 | WP_201011882.1 | DDE-type integrase/transposase/recombinase | - |
| ATY38_RS07810 () | 1733708..1734061 | + | 354 | WP_062558810.1 | DsrE family protein | - |
| ATY38_RS07815 () | 1734276..1734515 | + | 240 | WP_062558811.1 | Arc family DNA-binding protein | Antitoxin Detail |
| ATY38_RS07820 () | 1734512..1734931 | + | 420 | WP_062558812.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| ATY38_RS07825 () | 1735726..1736769 | + | 1044 | WP_062558813.1 | selenide, water dikinase SelD | - |
| ATY38_RS07830 () | 1736839..1737411 | - | 573 | WP_062558814.1 | adenylyltransferase/cytidyltransferase family protein | - |
| ATY38_RS07835 () | 1737384..1738034 | - | 651 | WP_143023503.1 | hypothetical protein | - |
| ATY38_RS07840 () | 1738147..1739313 | + | 1167 | WP_062558265.1 | IS4 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|