MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 112763 bp
Accession: NZ_CP013298 Location: 1..112763 Organism: Arthrobacter sp. YC-RL1 Replicon: plasmid unnamed 1
Accession: NZ_CP013298 Location: 1..112763 Organism: Arthrobacter sp. YC-RL1 Replicon: plasmid unnamed 1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATC04_RS17820 () | 216..557 | - | 342 | WP_157359304.1 | hypothetical protein | - |
| ATC04_RS19560 () | 1134..1517 | + | 384 | WP_152666730.1 | hypothetical protein | - |
| ATC04_RS17825 () | 1561..2130 | - | 570 | WP_152666731.1 | hypothetical protein | - |
| ATC04_RS19025 () | 2367..2610 | - | 244 | Protein_4 | hypothetical protein | - |
| ATC04_RS17835 () | 3331..3975 | - | 645 | WP_047117786.1 | AAA family ATPase | - |
| ATC04_RS19565 () | 4516..4749 | - | 234 | WP_157359305.1 | hypothetical protein | - |
| ATC04_RS19570 () | 4920..5186 | - | 267 | WP_152666733.1 | hypothetical protein | - |
| ATC04_RS17840 () | 5293..6720 | - | 1428 | WP_047117787.1 | hypothetical protein | - |
| ATC04_RS17845 () | 7370..8181 | - | 812 | Protein_9 | AAA family ATPase | - |
| ATC04_RS17850 () | 8181..9593 | - | 1413 | WP_052772175.1 | DDE-type integrase/transposase/recombinase | - |
| ATC04_RS17855 () | 9696..10289 | - | 594 | WP_035762867.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| ATC04_RS17860 () | 10685..11104 | - | 420 | WP_022876883.1 | DUF302 domain-containing protein | - |
| ATC04_RS17865 () | 11193..12521 | - | 1329 | WP_047117789.1 | MFS transporter | - |
| ATC04_RS17870 () | 12576..13472 | - | 897 | WP_047117790.1 | sulfite exporter TauE/SafE family protein | - |
| ATC04_RS17875 () | 13538..13834 | - | 297 | WP_047117791.1 | rhodanese-like domain-containing protein | - |
| ATC04_RS17880 () | 13955..14566 | - | 612 | WP_096287256.1 | rhodanese-like domain-containing protein | - |
| ATC04_RS17885 () | 14654..16051 | - | 1398 | WP_022876878.1 | MBL fold metallo-hydrolase | - |
| ATC04_RS17890 () | 16569..16826 | + | 258 | WP_022876876.1 | metal-sensitive transcriptional regulator | - |
| ATC04_RS17895 () | 17519..17950 | - | 432 | WP_152666734.1 | hypothetical protein | - |
| ATC04_RS19035 () | 18660..19031 | - | 372 | WP_082123736.1 | Asp23/Gls24 family envelope stress response protein | - |
| ATC04_RS17900 () | 19251..19745 | - | 495 | WP_047117793.1 | Asp23/Gls24 family envelope stress response protein | - |
| ATC04_RS17905 () | 19870..20412 | + | 543 | WP_047117794.1 | ECF RNA polymerase sigma-E factor | VF |
| ATC04_RS17910 () | 20409..20978 | + | 570 | WP_047117795.1 | hypothetical protein | - |
| ATC04_RS17915 () | 21017..21583 | - | 567 | WP_047117796.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| ATC04_RS19575 () | 21948..22601 | + | 654 | WP_152666736.1 | hypothetical protein | - |
| ATC04_RS17920 () | 22619..23650 | + | 1032 | WP_047117797.1 | ImmA/IrrE family metallo-endopeptidase | - |
| ATC04_RS17925 () | 23710..25581 | + | 1872 | WP_082123738.1 | AAA family ATPase | - |
| ATC04_RS17930 () | 25591..27285 | + | 1695 | WP_052772176.1 | ATP-dependent helicase | - |
| ATC04_RS17935 () | 27789..28055 | - | 267 | WP_047117799.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| ATC04_RS17940 () | 28052..28300 | - | 249 | WP_022876888.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| ATC04_RS19040 () | 28443..29579 | + | 1137 | WP_082123739.1 | ferrochelatase | - |
| ATC04_RS19580 () | 29761..29910 | - | 150 | WP_152666744.1 | cold shock domain-containing protein | - |
| ATC04_RS17950 () | 29931..31490 | - | 1560 | WP_047117835.1 | molybdopterin-dependent oxidoreductase | - |
| ATC04_RS17955 () | 31630..32436 | - | 807 | WP_047117801.1 | anti-sigma factor | - |
| ATC04_RS17960 () | 32436..33014 | - | 579 | WP_047117802.1 | ECF RNA polymerase sigma factor SigK | VF |
| ATC04_RS17965 () | 33162..33854 | - | 693 | WP_022876894.1 | fasciclin domain-containing protein | - |
| ATC04_RS17970 () | 34092..35579 | - | 1488 | WP_047117803.1 | AAA family ATPase | - |
| ATC04_RS17975 () | 35646..36224 | - | 579 | WP_052772167.1 | hypothetical protein | - |
| ATC04_RS17980 () | 36221..37357 | - | 1137 | WP_052772168.1 | transglycosylase SLT domain-containing protein | - |
| ATC04_RS17985 () | 37372..38850 | - | 1479 | WP_047117804.1 | hypothetical protein | - |
| ATC04_RS17990 () | 38881..39099 | - | 219 | WP_082123740.1 | helix-turn-helix domain-containing protein | - |
| ATC04_RS19585 () | 39135..39908 | + | 774 | WP_152666737.1 | hypothetical protein | - |
| ATC04_RS17995 () | 39921..40202 | + | 282 | WP_047117806.1 | hypothetical protein | - |
| ATC04_RS18000 () | 40246..40953 | + | 708 | WP_047117807.1 | hypothetical protein | - |
| ATC04_RS18005 () | 40960..42519 | + | 1560 | WP_047117808.1 | hypothetical protein | - |
| ATC04_RS18010 () | 42522..44033 | + | 1512 | WP_047117809.1 | hypothetical protein | - |
| ATC04_RS18015 () | 44033..45664 | + | 1632 | WP_047117810.1 | lipoprotein | - |
| ATC04_RS18020 () | 45664..47373 | + | 1710 | WP_047117811.1 | type IV secretory system conjugative DNA transfer family protein | - |
| ATC04_RS19590 () | 48815..49177 | - | 363 | WP_152666738.1 | hypothetical protein | - |
| ATC04_RS19595 () | 49187..49885 | - | 699 | WP_152666739.1 | hypothetical protein | - |
| ATC04_RS18035 () | 50295..50735 | - | 441 | WP_052772169.1 | DUF4913 domain-containing protein | - |
| ATC04_RS18040 () | 50732..51805 | - | 1074 | WP_152666740.1 | hypothetical protein | - |
| ATC04_RS18045 () | 51833..53335 | - | 1503 | WP_052772170.1 | hypothetical protein | Relaxase |
| ATC04_RS18050 () | 53332..53724 | - | 393 | WP_047117814.1 | hypothetical protein | Relaxase |
| ATC04_RS19600 () | 53985..54251 | + | 267 | WP_152666741.1 | hypothetical protein | - |
| ATC04_RS18060 () | 54663..55085 | - | 423 | WP_052772171.1 | hypothetical protein | - |
| ATC04_RS18065 () | 55605..56693 | + | 1089 | WP_047117816.1 | DUF1016 family protein | - |
| ATC04_RS19045 () | 56892..57545 | - | 654 | WP_082123741.1 | type A chloramphenicol O-acetyltransferase | - |
| ATC04_RS19605 () | 57811..58008 | + | 198 | WP_157359306.1 | hypothetical protein | - |
| ATC04_RS18070 () | 58094..59764 | + | 1671 | WP_047117817.1 | potassium-transporting ATPase subunit KdpA | - |
| ATC04_RS18075 () | 59769..61931 | + | 2163 | WP_052772172.1 | potassium-transporting ATPase subunit KdpB | - |
| ATC04_RS18080 () | 61954..62556 | + | 603 | WP_047117818.1 | potassium-transporting ATPase subunit KdpC | - |
| ATC04_RS18085 () | 62540..65044 | + | 2505 | WP_047117819.1 | sensor histidine kinase KdpD | - |
| ATC04_RS18090 () | 65041..65721 | + | 681 | WP_197413578.1 | Transcriptional regulatory protein KdpE | VF |
| ATC04_RS18095 () | 65898..66455 | + | 558 | WP_047117821.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| ATC04_RS18100 () | 66604..67191 | - | 588 | WP_047117822.1 | TetR family transcriptional regulator | - |
| ATC04_RS18105 () | 67398..68828 | + | 1431 | WP_047117823.1 | APC family permease | - |
| ATC04_RS18110 () | 68878..69681 | + | 804 | WP_047117824.1 | MoaF N-terminal domain-containing protein | - |
| ATC04_RS18115 () | 69951..70529 | + | 579 | WP_047117825.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| ATC04_RS19610 () | 70735..70887 | + | 153 | WP_157359307.1 | hypothetical protein | - |
| ATC04_RS18120 () | 71974..75366 | + | 3393 | WP_152666742.1 | hypothetical protein | - |
| ATC04_RS18125 () | 75453..77138 | + | 1686 | WP_052772174.1 | Fimbrial subunit type 1 | VF |
| ATC04_RS18130 () | 77251..78066 | + | 816 | WP_047117844.1 | hypothetical protein | VF |
| ATC04_RS18135 () | 78519..79721 | - | 1203 | WP_047117827.1 | GIY-YIG nuclease family protein | - |
| ATC04_RS18140 () | 79718..81700 | - | 1983 | WP_047117828.1 | ATP-dependent helicase | - |
| ATC04_RS18145 () | 81697..84420 | - | 2724 | WP_047117829.1 | class I SAM-dependent DNA methyltransferase | - |
| ATC04_RS18150 () | 84838..85329 | + | 492 | WP_052772177.1 | hypothetical protein | - |
| ATC04_RS18155 () | 85375..86052 | + | 678 | WP_160309062.1 | DNA/RNA non-specific endonuclease | - |
| ATC04_RS19615 () | 86933..87802 | - | 870 | WP_160309061.1 | FRG domain-containing protein | - |
| ATC04_RS19620 () | 88222..89151 | - | 930 | WP_152666725.1 | hypothetical protein | - |
| ATC04_RS18175 () | 89482..90546 | + | 1065 | WP_082123733.1 | ISL3 family transposase ISAar34 | Transposase |
| ATC04_RS18185 () | 90775..92246 | + | 1472 | WP_152666726.1 | IS3 family transposase ISAar44 | Transposase |
| ATC04_RS18190 () | 92346..93089 | - | 744 | WP_047117771.1 | hypothetical protein | - |
| ATC04_RS18195 () | 93430..93618 | - | 189 | WP_047117772.1 | CsbD family protein | - |
| ATC04_RS18200 () | 94193..94687 | - | 495 | WP_082123734.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| ATC04_RS18205 () | 95283..95543 | + | 261 | WP_047117773.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| ATC04_RS19625 () | 95634..95933 | - | 300 | WP_152666727.1 | hypothetical protein | - |
| ATC04_RS18215 () | 96208..96756 | - | 549 | WP_047117775.1 | MarR family transcriptional regulator | - |
| ATC04_RS18220 () | 96994..97407 | + | 414 | WP_047117776.1 | hypothetical protein | - |
| ATC04_RS18225 () | 97543..98025 | + | 483 | WP_082123735.1 | hypothetical protein | - |
| ATC04_RS18235 () | 98437..98652 | + | 216 | WP_047117779.1 | hypothetical protein | - |
| ATC04_RS18245 () | 99681..100517 | + | 837 | WP_052772166.1 | DNA/RNA non-specific endonuclease | - |
| ATC04_RS18250 () | 100588..101214 | - | 627 | WP_047117781.1 | helicase associated domain-containing protein | - |
| ATC04_RS18255 () | 101408..102205 | - | 798 | WP_152666729.1 | hypothetical protein | - |
| ATC04_RS19630 () | 102326..102709 | + | 384 | WP_152666730.1 | hypothetical protein | - |
| ATC04_RS18260 () | 102753..103322 | - | 570 | WP_152666731.1 | hypothetical protein | - |
| ATC04_RS19050 () | 103559..103802 | - | 244 | Protein_98 | hypothetical protein | - |
| ATC04_RS18270 () | 104523..105167 | - | 645 | WP_047117786.1 | AAA family ATPase | - |
| ATC04_RS19635 () | 105708..105941 | - | 234 | WP_157359305.1 | hypothetical protein | - |
| ATC04_RS19640 () | 106112..106378 | - | 267 | WP_152666733.1 | hypothetical protein | - |
| ATC04_RS18275 () | 106485..107912 | - | 1428 | WP_047117787.1 | hypothetical protein | - |
| ATC04_RS18280 () | 108562..109373 | - | 812 | Protein_103 | AAA family ATPase | - |
| ATC04_RS18285 () | 109373..110785 | - | 1413 | WP_052772175.1 | DDE-type integrase/transposase/recombinase | - |
| ATC04_RS18290 () | 110888..111481 | - | 594 | WP_035762867.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| ATC04_RS18295 () | 111876..112295 | - | 420 | WP_022876883.1 | DUF302 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|