MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 112176 bp
Accession: NZ_CP013224 Location: 1..112176 Organism: Salmonella enterica subsp. enterica serovar Anatum strain GT-38 Replicon: plasmid PDM04
Accession: NZ_CP013224 Location: 1..112176 Organism: Salmonella enterica subsp. enterica serovar Anatum strain GT-38 Replicon: plasmid PDM04
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AS586_RS24065 () | 1085..1741 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| AS586_RS00010 () | 1726..2286 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| AS586_RS00015 () | 2296..2910 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| AS586_RS00020 () | 2928..4025 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| AS586_RS00025 () | 4038..5591 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| AS586_RS00030 () | 5602..6054 | - | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| AS586_RS00035 () | 6041..7336 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| AS586_RS00040 () | 7329..9011 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| AS586_RS00045 () | 9025..9462 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| AS586_RS24070 () | 9462..10529 | - | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| AS586_RS00055 () | 11203..11655 | - | 453 | WP_000008893.1 | hypothetical protein | - |
| AS586_RS00060 () | 11698..11952 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| AS586_RS00065 () | 12220..12786 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| AS586_RS00070 () | 12800..13483 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| AS586_RS00075 () | 13737..14270 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| AS586_RS00080 () | 14712..14999 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| AS586_RS24090 () | 14917..15180 | - | 264 | WP_001324596.1 | ash family protein | - |
| AS586_RS00090 () | 16153..17184 | + | 1032 | WP_000907875.1 | replication initiation protein | - |
| AS586_RS00095 () | 18167..19177 | - | 1011 | WP_000487119.1 | IS110 family transposase | - |
| AS586_RS00100 () | 19570..19839 | + | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| AS586_RS00105 () | 19836..20117 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AS586_RS00110 () | 20157..21005 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| AS586_RS26610 () | 21242..21367 | - | 126 | Protein_23 | MerR family transcriptional regulator | - |
| AS586_RS00115 () | 21323..22972 | + | 1650 | WP_000896475.1 | DDE-type integrase/transposase/recombinase | - |
| AS586_RS00120 () | 22975..23835 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| AS586_RS00125 () | 23937..25460 | + | 1524 | WP_001324342.1 | IS21-like element IS1326 family transposase | - |
| AS586_RS00130 () | 25450..26232 | + | 783 | WP_001163403.1 | IS21-like element IS1326 family helper ATPase IstB | - |
| AS586_RS00135 () | 26408..26908 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| AS586_RS00140 () | 27036..27875 | - | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| AS586_RS00145 () | 27869..28216 | - | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| AS586_RS00150 () | 28434..29669 | - | 1236 | WP_001137513.1 | IS256-like element ISEc58 family transposase | - |
| AS586_RS00155 () | 29937..31466 | - | 1530 | WP_001137772.1 | IS91 family transposase | - |
| AS586_RS24120 () | 31655..31864 | - | 210 | Protein_33 | chaperonin GroEL | - |
| AS586_RS00160 () | 32012..32872 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| AS586_RS00165 () | 33055..33612 | - | 558 | WP_001235713.1 | recombinase family protein | - |
| AS586_RS00170 () | 33776..36781 | + | 3006 | WP_001143760.1 | Tn3-like element Tn3 family transposase | - |
| AS586_RS00175 () | 36817..38247 | - | 1431 | Protein_37 | chaperonin GroEL | - |
| AS586_RS00180 () | 38303..38623 | - | 321 | WP_000535481.1 | co-chaperone GroES | - |
| AS586_RS00185 () | 38830..39717 | - | 888 | WP_139324384.1 | aminoglycoside N-acetyltransferase AAC(3)-VIa | - |
| AS586_RS00190 () | 39884..40675 | - | 792 | WP_001206316.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| AS586_RS00195 () | 40824..41837 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| AS586_RS26120 () | 42040..42390 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| AS586_RS00205 () | 42516..43076 | + | 561 | WP_000147567.1 | recombinase family protein | - |
| AS586_RS00210 () | 43079..46045 | + | 2967 | WP_001138064.1 | Tn3-like element TnAs3 family transposase | - |
| AS586_RS00215 () | 46054..46470 | + | 417 | WP_031610367.1 | hypothetical protein | - |
| AS586_RS00220 () | 46954..47220 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| AS586_RS00225 () | 47220..47714 | - | 495 | WP_001442119.1 | hypothetical protein | - |
| AS586_RS00230 () | 47770..48372 | - | 603 | WP_000517689.1 | hypothetical protein | - |
| AS586_RS00235 () | 48726..50072 | + | 1347 | WP_001132019.1 | hypothetical protein | - |
| AS586_RS00240 () | 50351..52231 | + | 1881 | WP_001283356.1 | colicin | - |
| AS586_RS00245 () | 52249..52596 | - | 348 | WP_000762580.1 | hypothetical protein | - |
| AS586_RS00250 () | 52715..53062 | + | 348 | WP_000142424.1 | hypothetical protein | - |
| AS586_RS00255 () | 53080..53670 | - | 591 | WP_000194561.1 | hypothetical protein | - |
| AS586_RS00260 () | 53667..53927 | - | 261 | WP_000343102.1 | hypothetical protein | - |
| AS586_RS00265 () | 54496..54909 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| AS586_RS00270 () | 54911..55696 | + | 786 | WP_001164192.1 | site-specific integrase | - |
| AS586_RS00275 () | 56280..56912 | + | 633 | WP_000312331.1 | ParA family protein | - |
| AS586_RS26615 () | 56912..57286 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| AS586_RS00285 () | 57525..58499 | + | 975 | WP_001217836.1 | hypothetical protein | - |
| AS586_RS00290 () | 58503..58895 | + | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| AS586_RS00300 () | 59576..60478 | + | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| AS586_RS26125 () | 60475..60787 | + | 313 | Protein_62 | hypothetical protein | - |
| AS586_RS00305 () | 60863..61546 | + | 684 | WP_000086147.1 | DNA methylase | - |
| AS586_RS00310 () | 61547..61768 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| AS586_RS00315 () | 61782..62216 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| AS586_RS26620 () | 62262..63038 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| AS586_RS00330 () | 63456..63881 | + | 426 | WP_001198939.1 | antirestriction protein | - |
| AS586_RS00335 () | 63928..64350 | + | 423 | WP_000271705.1 | DUF1380 family protein | - |
| AS586_RS25690 () | 64347..64538 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| AS586_RS25695 () | 64609..64923 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| AS586_RS00350 () | 65307..65834 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| AS586_RS00355 () | 65892..66125 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| AS586_RS00360 () | 66184..68142 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| AS586_RS00365 () | 68197..68631 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| AS586_RS00370 () | 68628..69347 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| AS586_RS00375 () | 69344..69940 | + | 597 | WP_000977997.1 | hypothetical protein | - |
| AS586_RS26495 () | 70402..70902 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| AS586_RS00385 () | 71631..72065 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| AS586_RS00390 () | 72159..72425 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| AS586_RS00395 () | 72490..73428 | + | 939 | WP_000078704.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| AS586_RS24190 () | 73451..73648 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| AS586_RS00400 () | 73679..73930 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| AS586_RS26625 () | 73964..74161 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| AS586_RS00405 () | 74510..75358 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| AS586_RS00410 () | 75444..75779 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| AS586_RS00415 () | 76012..76344 | + | 333 | WP_001281051.1 | hypothetical protein | - |
| AS586_RS00420 () | 76355..79054 | + | 2700 | WP_001354015.1 | IncI1-type relaxase NikB | - |
| AS586_RS00425 () | 79091..81382 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| AS586_RS00430 () | 81375..82445 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| AS586_RS00435 () | 82464..83672 | - | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| AS586_RS00440 () | 83964..84116 | + | 153 | WP_001331364.1 | Hok/Gef family protein | - |
| AS586_RS00445 () | 84739..85035 | + | 297 | WP_001275298.1 | hypothetical protein | - |
| AS586_RS26630 () | 85100..85276 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| AS586_RS00450 () | 85668..85877 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| AS586_RS00455 () | 85949..86611 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AS586_RS00460 () | 86676..88838 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| AS586_RS00465 () | 88935..89519 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| AS586_RS00470 () | 89548..90750 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| AS586_RS24205 () | 90717..91331 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| AS586_RS00475 () | 91331..94375 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| AS586_RS00480 () | 94465..95265 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| AS586_RS00485 () | 95249..95437 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| AS586_RS00490 () | 95501..95905 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| AS586_RS00495 () | 95956..96483 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| AS586_RS00500 () | 96483..97187 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| AS586_RS00505 () | 97187..98476 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| AS586_RS00510 () | 98479..99462 | - | 984 | WP_001191877.1 | IncI1-type conjugal transfer protein TraN | - |
| AS586_RS00515 () | 99473..100165 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| AS586_RS00520 () | 100162..100509 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| AS586_RS00525 () | 100527..104294 | - | 3768 | WP_001141529.1 | DNA primase | - |
| AS586_RS00530 () | 104384..104935 | - | 552 | WP_000014583.1 | phospholipase D family protein | - |
| AS586_RS24210 () | 104950..105240 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| AS586_RS00535 () | 105237..106385 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| AS586_RS00540 () | 106382..107200 | - | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| AS586_RS00545 () | 107197..107655 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| AS586_RS00550 () | 108050..108634 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| AS586_RS00555 () | 108694..109896 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| AS586_RS00560 () | 109981..110805 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| AS586_RS00565 () | 110956..112110 | - | 1155 | WP_001139957.1 | integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|