MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 112176 bp
Accession: NZ_CP013221 Location: 1..112176 Organism: Salmonella enterica subsp. enterica serovar Anatum strain GT-01 Replicon: plasmid PDM02
Accession: NZ_CP013221 Location: 1..112176 Organism: Salmonella enterica subsp. enterica serovar Anatum strain GT-01 Replicon: plasmid PDM02
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AS587_RS00010 () | 67..1221 | + | 1155 | WP_001139957.1 | integrase | - |
| AS587_RS00015 () | 1372..2196 | + | 825 | WP_001238939.1 | hypothetical protein | - |
| AS587_RS00020 () | 2281..3483 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| AS587_RS00025 () | 3543..4127 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| AS587_RS00030 () | 4522..4980 | + | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| AS587_RS00035 () | 4977..5795 | + | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| AS587_RS00040 () | 5792..6940 | + | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| AS587_RS24355 () | 6937..7227 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| AS587_RS00045 () | 7242..7793 | + | 552 | WP_000014583.1 | phospholipase D family protein | - |
| AS587_RS00050 () | 7883..11650 | + | 3768 | WP_001141529.1 | DNA primase | - |
| AS587_RS00055 () | 11668..12015 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| AS587_RS00060 () | 12012..12704 | + | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| AS587_RS00065 () | 12715..13698 | + | 984 | WP_001191877.1 | IncI1-type conjugal transfer protein TraN | - |
| AS587_RS00070 () | 13701..14990 | + | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| AS587_RS00075 () | 14990..15694 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| AS587_RS00080 () | 15694..16221 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| AS587_RS00085 () | 16272..16676 | + | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| AS587_RS00090 () | 16740..16928 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| AS587_RS00095 () | 16912..17712 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| AS587_RS00100 () | 17802..20846 | + | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| AS587_RS24360 () | 20846..21460 | + | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| AS587_RS00105 () | 21427..22629 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| AS587_RS00110 () | 22658..23242 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| AS587_RS00115 () | 23339..25501 | + | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| AS587_RS00120 () | 25566..26228 | + | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AS587_RS00125 () | 26300..26509 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| AS587_RS26545 () | 26901..27077 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| AS587_RS00130 () | 27142..27438 | - | 297 | WP_001275298.1 | hypothetical protein | - |
| AS587_RS00135 () | 28061..28213 | - | 153 | WP_001331364.1 | Hok/Gef family protein | - |
| AS587_RS00140 () | 28505..29713 | + | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| AS587_RS00145 () | 29732..30802 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| AS587_RS00150 () | 30795..33086 | + | 2292 | WP_001289276.1 | hypothetical protein | - |
| AS587_RS00155 () | 33123..35822 | - | 2700 | WP_001354015.1 | IncI1-type relaxase NikB | - |
| AS587_RS00160 () | 35833..36165 | - | 333 | WP_001281051.1 | hypothetical protein | - |
| AS587_RS00165 () | 36398..36733 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| AS587_RS00170 () | 36819..37667 | - | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| AS587_RS26550 () | 38016..38213 | + | 198 | WP_001161115.1 | hypothetical protein | - |
| AS587_RS00175 () | 38247..38498 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| AS587_RS24375 () | 38529..38726 | - | 198 | WP_001348086.1 | hypothetical protein | - |
| AS587_RS00180 () | 38749..39687 | - | 939 | WP_000078704.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| AS587_RS00185 () | 39752..40018 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| AS587_RS00190 () | 40112..40546 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| AS587_RS26440 () | 41275..41775 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| AS587_RS00200 () | 42237..42833 | - | 597 | WP_000977997.1 | hypothetical protein | - |
| AS587_RS00205 () | 42830..43549 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| AS587_RS00210 () | 43546..43980 | - | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| AS587_RS00215 () | 44035..45993 | - | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| AS587_RS00220 () | 46052..46285 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| AS587_RS00225 () | 46343..46870 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| AS587_RS00230 () | 47254..47568 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| AS587_RS00235 () | 47639..47830 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| AS587_RS00240 () | 47827..48249 | - | 423 | WP_000271705.1 | DUF1380 family protein | - |
| AS587_RS00245 () | 48296..48721 | - | 426 | WP_001198939.1 | antirestriction protein | - |
| AS587_RS26555 () | 49139..49915 | - | 777 | WP_001005043.1 | hypothetical protein | - |
| AS587_RS00260 () | 49961..50395 | - | 435 | WP_000274500.1 | DUF1380 family protein | - |
| AS587_RS00265 () | 50409..50630 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| AS587_RS00270 () | 50631..51314 | - | 684 | WP_000086147.1 | DNA methylase | - |
| AS587_RS26055 () | 51390..51702 | - | 313 | Protein_58 | hypothetical protein | - |
| AS587_RS00275 () | 51699..52601 | - | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| AS587_RS00285 () | 53282..53674 | - | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| AS587_RS00290 () | 53678..54652 | - | 975 | WP_001217836.1 | hypothetical protein | - |
| AS587_RS26560 () | 54891..55265 | - | 375 | WP_000752652.1 | hypothetical protein | - |
| AS587_RS00300 () | 55265..55897 | - | 633 | WP_000312331.1 | ParA family protein | - |
| AS587_RS00305 () | 56481..57266 | - | 786 | WP_001164192.1 | site-specific integrase | - |
| AS587_RS00310 () | 57268..57681 | - | 414 | WP_000465034.1 | hypothetical protein | - |
| AS587_RS00315 () | 58250..58510 | + | 261 | WP_000343102.1 | hypothetical protein | - |
| AS587_RS00320 () | 58507..59097 | + | 591 | WP_000194561.1 | hypothetical protein | - |
| AS587_RS00325 () | 59115..59462 | - | 348 | WP_000142424.1 | hypothetical protein | - |
| AS587_RS00330 () | 59581..59928 | + | 348 | WP_000762580.1 | hypothetical protein | - |
| AS587_RS00335 () | 59946..61826 | - | 1881 | WP_001283356.1 | colicin | - |
| AS587_RS00340 () | 62105..63451 | - | 1347 | WP_001132019.1 | hypothetical protein | - |
| AS587_RS00345 () | 63805..64407 | + | 603 | WP_000517689.1 | hypothetical protein | - |
| AS587_RS00350 () | 64463..64957 | + | 495 | WP_001442119.1 | hypothetical protein | - |
| AS587_RS26565 () | 64957..65223 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| AS587_RS00360 () | 65707..66123 | - | 417 | WP_031610367.1 | hypothetical protein | - |
| AS587_RS00365 () | 66132..69098 | - | 2967 | WP_001138064.1 | Tn3-like element TnAs3 family transposase | - |
| AS587_RS00370 () | 69101..69661 | - | 561 | WP_000147567.1 | recombinase family protein | - |
| AS587_RS26060 () | 69787..70137 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| AS587_RS00380 () | 70340..71353 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| AS587_RS00385 () | 71502..72293 | + | 792 | WP_001206316.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| AS587_RS00390 () | 72460..73347 | + | 888 | WP_139324384.1 | aminoglycoside N-acetyltransferase AAC(3)-VIa | - |
| AS587_RS00395 () | 73554..73874 | + | 321 | WP_000535481.1 | co-chaperone GroES | - |
| AS587_RS00400 () | 73930..75360 | + | 1431 | Protein_83 | chaperonin GroEL | - |
| AS587_RS00405 () | 75396..78401 | - | 3006 | WP_001143760.1 | Tn3-like element Tn3 family transposase | - |
| AS587_RS00410 () | 78565..79122 | + | 558 | WP_001235713.1 | recombinase family protein | - |
| AS587_RS00415 () | 79305..80165 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| AS587_RS24440 () | 80313..80522 | + | 210 | Protein_87 | chaperonin GroEL | - |
| AS587_RS00420 () | 80711..82240 | + | 1530 | WP_001137772.1 | IS91 family transposase | - |
| AS587_RS00425 () | 82508..83743 | + | 1236 | WP_001137513.1 | IS256-like element ISEc58 family transposase | - |
| AS587_RS00430 () | 83961..84308 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| AS587_RS00435 () | 84302..85141 | + | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| AS587_RS00440 () | 85269..85769 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| AS587_RS00445 () | 85945..86727 | - | 783 | WP_001163403.1 | IS21-like element IS1326 family helper ATPase IstB | - |
| AS587_RS00450 () | 86717..88240 | - | 1524 | WP_001324342.1 | IS21-like element IS1326 family transposase | - |
| AS587_RS00455 () | 88342..89202 | - | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| AS587_RS00460 () | 89205..90854 | - | 1650 | WP_000896475.1 | DDE-type integrase/transposase/recombinase | - |
| AS587_RS26570 () | 90810..90935 | + | 126 | Protein_97 | MerR family transcriptional regulator | - |
| AS587_RS00465 () | 91172..92020 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| AS587_RS00470 () | 92060..92341 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AS587_RS00475 () | 92338..92607 | - | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| AS587_RS00480 () | 93000..94010 | + | 1011 | WP_000487119.1 | IS110 family transposase | - |
| AS587_RS00485 () | 94993..96024 | - | 1032 | WP_000907875.1 | replication initiation protein | - |
| AS587_RS24475 () | 96997..97260 | + | 264 | WP_001324596.1 | ash family protein | - |
| AS587_RS00495 () | 97178..97465 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| AS587_RS00500 () | 97907..98440 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| AS587_RS00505 () | 98694..99377 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| AS587_RS00510 () | 99391..99957 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| AS587_RS00515 () | 100225..100479 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| AS587_RS00520 () | 100522..100974 | + | 453 | WP_000008893.1 | hypothetical protein | - |
| AS587_RS24495 () | 101648..102715 | + | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| AS587_RS00530 () | 102715..103152 | + | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| AS587_RS00535 () | 103166..104848 | + | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| AS587_RS00540 () | 104841..106136 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| AS587_RS00545 () | 106123..106575 | + | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| AS587_RS00550 () | 106586..108139 | + | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| AS587_RS00555 () | 108152..109249 | + | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| AS587_RS00560 () | 109267..109881 | + | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| AS587_RS00565 () | 109891..110451 | + | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| AS587_RS24500 () | 110436..111092 | + | 657 | WP_001193553.1 | prepilin peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|