MGE detailed information
MGE type: Prophage MGE length: 59889 bp
Accession: NZ_CP013218 Location: 1540903..1600791 Organism: Staphylococcus aureus strain LA-MRSA ST398 isolate E154 Replicon: chromosome
Accession: NZ_CP013218 Location: 1540903..1600791 Organism: Staphylococcus aureus strain LA-MRSA ST398 isolate E154 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AS852_RS07595 () | 1536242..1536490 | + | 249 | WP_001151997.1 | ferredoxin | - |
| AS852_RS07600 () | 1536596..1537141 | - | 546 | WP_001186909.1 | ECF transporter S component | - |
| AS852_RS07605 () | 1537545..1538477 | - | 933 | WP_001825312.1 | DUF1672 domain-containing protein | - |
| AS852_RS07610 () | 1538932..1539828 | - | 897 | WP_001807840.1 | DUF1672 domain-containing protein | - |
| AS852_RS07615 () | 1539883..1540812 | - | 930 | WP_001825313.1 | DUF1672 domain-containing protein | - |
| AS852_RS15275 () | 1540903..1541118 | - | 216 | WP_170267452.1 | hypothetical protein | - |
| AS852_RS07625 () | 1541494..1542330 | - | 837 | WP_000675478.1 | hypothetical protein | - |
| AS852_RS07635 () | 1542946..1544400 | - | 1455 | WP_000909210.1 | N-acetylmuramoyl-L-alanine amidase | - |
| AS852_RS07640 () | 1544411..1544713 | - | 303 | WP_000339144.1 | phage holin | - |
| AS852_RS07645 () | 1544849..1545148 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| AS852_RS07650 () | 1545194..1545358 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| AS852_RS07655 () | 1545351..1545740 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| AS852_RS07660 () | 1545740..1547206 | - | 1467 | WP_071938157.1 | BppU family phage baseplate upper protein | - |
| AS852_RS07665 () | 1547206..1549116 | - | 1911 | WP_000429551.1 | minor structural protein | - |
| AS852_RS07670 () | 1549132..1549422 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| AS852_RS07675 () | 1549422..1551005 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| AS852_RS07680 () | 1551014..1551838 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| AS852_RS07685 () | 1551838..1558038 | - | 6201 | WP_071938158.1 | phage tail tape measure protein | - |
| AS852_RS07690 () | 1558052..1558210 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| AS852_RS07695 () | 1558252..1558602 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| AS852_RS07700 () | 1558660..1559115 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| AS852_RS07705 () | 1559207..1559848 | - | 642 | WP_000807536.1 | tail protein | - |
| AS852_RS07710 () | 1559883..1560278 | - | 396 | WP_001028464.1 | DUF3168 domain-containing protein | - |
| AS852_RS07715 () | 1560279..1560680 | - | 402 | WP_000110015.1 | hypothetical protein | - |
| AS852_RS07720 () | 1560677..1561009 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| AS852_RS07725 () | 1561021..1561299 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| AS852_RS07730 () | 1561368..1562531 | - | 1164 | WP_001142738.1 | phage major capsid protein | - |
| AS852_RS07735 () | 1562543..1563316 | - | 774 | WP_031775146.1 | Clp protease ClpP | - |
| AS852_RS07740 () | 1563300..1564538 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| AS852_RS07745 () | 1564543..1566234 | - | 1692 | WP_015974521.1 | terminase large subunit | - |
| AS852_RS07750 () | 1566224..1566529 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| AS852_RS07755 () | 1566651..1566965 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| AS852_RS07760 () | 1567122..1567559 | - | 438 | WP_071938159.1 | transcriptional regulator | - |
| AS852_RS07765 () | 1567572..1568939 | - | 1368 | WP_078370275.1 | DEAD/DEAH box helicase | - |
| AS852_RS07770 () | 1568920..1569210 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| AS852_RS07775 () | 1569344..1569448 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| AS852_RS15280 () | 1569551..1571998 | - | 2448 | WP_071938162.1 | virulence-associated E family protein | - |
| AS852_RS07790 () | 1572050..1572250 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| AS852_RS07795 () | 1572318..1572470 | - | 153 | WP_000595213.1 | transcriptional activator RinB | - |
| AS852_RS07800 () | 1572467..1572673 | - | 207 | WP_031795553.1 | DUF1381 domain-containing protein | - |
| AS852_RS07805 () | 1572710..1573246 | - | 537 | WP_000185680.1 | dUTPase | - |
| AS852_RS07810 () | 1573239..1573487 | - | 249 | WP_031795590.1 | DUF1024 family protein | - |
| AS852_RS07815 () | 1573480..1573845 | - | 366 | WP_031796779.1 | hypothetical protein | - |
| AS852_RS07820 () | 1573842..1574279 | - | 438 | WP_031796778.1 | hypothetical protein | - |
| AS852_RS07825 () | 1574276..1574470 | - | 195 | WP_031794818.1 | hypothetical protein | - |
| AS852_RS07830 () | 1574467..1574874 | - | 408 | WP_000695771.1 | hypothetical protein | - |
| AS852_RS07835 () | 1574877..1575083 | - | 207 | WP_000693993.1 | hypothetical protein | - |
| AS852_RS07840 () | 1575098..1575346 | - | 249 | WP_078099081.1 | phi PVL orf 51-like protein | - |
| AS852_RS07845 () | 1575355..1575555 | - | 201 | WP_031796775.1 | hypothetical protein | - |
| AS852_RS07850 () | 1575558..1575815 | - | 258 | WP_015994745.1 | DUF3310 domain-containing protein | - |
| AS852_RS07855 () | 1575815..1576174 | - | 360 | WP_031903995.1 | phage protein | - |
| AS852_RS14930 () | 1576175..1576360 | - | 186 | WP_001187249.1 | DUF3113 family protein | - |
| AS852_RS07860 () | 1576360..1576515 | - | 156 | WP_000152769.1 | hypothetical protein | - |
| AS852_RS07865 () | 1576527..1578479 | - | 1953 | WP_078099133.1 | DNA polymerase | - |
| AS852_RS07870 () | 1578548..1579105 | - | 558 | WP_000645049.1 | DUF2815 family protein | - |
| AS852_RS07875 () | 1579131..1580297 | - | 1167 | WP_031912443.1 | DUF2800 domain-containing protein | - |
| AS852_RS07880 () | 1580294..1580656 | - | 363 | WP_071938163.1 | hypothetical protein | - |
| AS852_RS07885 () | 1580671..1580994 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| AS852_RS07890 () | 1581073..1581234 | - | 162 | WP_001285955.1 | DUF1270 family protein | - |
| AS852_RS07895 () | 1581247..1581510 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| AS852_RS07900 () | 1581535..1581750 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| AS852_RS07905 () | 1581805..1582170 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| AS852_RS07910 () | 1582139..1582384 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| AS852_RS07915 () | 1582451..1582831 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| AS852_RS07920 () | 1582818..1583015 | - | 198 | WP_001148860.1 | hypothetical protein | - |
| AS852_RS07925 () | 1583085..1583297 | + | 213 | WP_000362644.1 | hypothetical protein | - |
| AS852_RS15285 () | 1583338..1583487 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| AS852_RS07930 () | 1583543..1583752 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| AS852_RS07935 () | 1583742..1583885 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| AS852_RS07940 () | 1583901..1584149 | - | 249 | WP_000272860.1 | helix-turn-helix domain-containing protein | - |
| AS852_RS07945 () | 1584313..1584642 | + | 330 | WP_071938164.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| AS852_RS07950 () | 1584655..1585116 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| AS852_RS07955 () | 1585134..1585718 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| AS852_RS07960 () | 1585948..1586094 | + | 147 | WP_078099401.1 | hypothetical protein | - |
| AS852_RS07965 () | 1586091..1586705 | - | 615 | WP_000191458.1 | hypothetical protein | - |
| AS852_RS07970 () | 1586831..1588036 | + | 1206 | WP_000264747.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| AS852_RS07975 () | 1588079..1590105 | - | 2027 | Protein_1480 | hypothetical protein | - |
| AS852_RS07985 () | 1590098..1591027 | - | 930 | WP_001825329.1 | DUF1672 domain-containing protein | - |
| AS852_RS07990 () | 1591272..1593023 | - | 1752 | WP_000987760.1 | two-component system sensor histidine kinase SrrB | - |
| AS852_RS07995 () | 1593004..1593729 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| AS852_RS08000 () | 1593862..1594599 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| AS852_RS08005 () | 1594592..1595134 | - | 543 | WP_000368650.1 | SMC-Scp complex subunit ScpB | - |
| AS852_RS08010 () | 1595127..1595858 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| AS852_RS08015 () | 1595950..1596456 | + | 507 | WP_001183432.1 | DUF309 domain-containing protein | - |
| AS852_RS08020 () | 1596534..1597421 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| AS852_RS08025 () | 1597470..1597919 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| AS852_RS08030 () | 1598024..1598566 | - | 543 | WP_000365235.1 | NUDIX hydrolase | - |
| AS852_RS08035 () | 1598648..1599556 | + | 909 | WP_001171344.1 | aldo/keto reductase | - |
| AS852_RS08040 () | 1599772..1600020 | - | 249 | WP_000995803.1 | hypothetical protein | - |
| AS852_RS08045 () | 1600036..1600791 | - | 756 | WP_000678222.1 | SDR family oxidoreductase | - |
| AS852_RS08050 () | 1600933..1601748 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| AS852_RS08055 () | 1601853..1602773 | - | 921 | WP_000454060.1 | ribonuclease Z | - |
| AS852_RS08060 () | 1603086..1604570 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| AS852_RS08065 () | 1604800..1605666 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|