MGE detailed information
MGE type: Genomic_island MGE length: 14253 bp
Accession: NZ_CP013124 Location: 1580918..1595170 Organism: Pseudomonas mendocina S5.2 Replicon: chromosome
Accession: NZ_CP013124 Location: 1580918..1595170 Organism: Pseudomonas mendocina S5.2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DW68_RS07430 () | 1576229..1577206 | - | 978 | WP_013716578.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| DW68_RS07435 () | 1577377..1578078 | + | 702 | WP_017362638.1 | transporter substrate-binding domain-containing protein | - |
| DW68_RS07440 () | 1578161..1579306 | + | 1146 | WP_017362637.1 | PQQ-dependent sugar dehydrogenase | - |
| DW68_RS07445 () | 1579347..1579538 | - | 192 | WP_013716575.1 | hypothetical protein | - |
| DW68_RS07450 () | 1579779..1580621 | + | 843 | WP_024309031.1 | GntR family transcriptional regulator | - |
| DW68_RS07460 () | 1580918..1582135 | + | 1218 | WP_017362636.1 | Prophage integrase IntS ; Integrase | Integrase |
| DW68_RS25665 () | 1582132..1582848 | + | 717 | WP_155718690.1 | hypothetical protein | - |
| DW68_RS25445 () | 1582964..1583170 | + | 207 | WP_026042091.1 | AlpA family phage regulatory protein | - |
| DW68_RS07465 () | 1583250..1583783 | + | 534 | WP_155718691.1 | helix-turn-helix domain-containing protein | - |
| DW68_RS07470 () | 1583928..1584851 | - | 924 | WP_017362634.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DW68_RS07480 () | 1586324..1587064 | - | 741 | WP_017362632.1 | cold shock domain-containing protein | - |
| DW68_RS25670 () | 1587208..1587657 | + | 450 | WP_155718692.1 | hypothetical protein | - |
| DW68_RS07485 () | 1588279..1588500 | + | 222 | WP_155718693.1 | hypothetical protein | - |
| DW68_RS07490 () | 1588574..1589389 | + | 816 | WP_017362629.1 | hypothetical protein | - |
| DW68_RS07495 () | 1589662..1590414 | + | 753 | WP_017362628.1 | phage Gp37/Gp68 family protein | - |
| DW68_RS07500 () | 1590395..1591228 | - | 834 | WP_196770182.1 | three-Cys-motif partner protein TcmP | - |
| DW68_RS07505 () | 1591438..1592724 | + | 1287 | WP_017362626.1 | three-Cys-motif partner protein TcmP | - |
| DW68_RS07510 () | 1592805..1592999 | - | 195 | WP_017362625.1 | hypothetical protein | - |
| DW68_RS07515 () | 1593355..1593987 | - | 633 | WP_026042090.1 | hypothetical protein | - |
| DW68_RS07520 () | 1594571..1594819 | + | 249 | WP_017362623.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DW68_RS07525 () | 1594832..1595170 | + | 339 | WP_017362622.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DW68_RS07530 () | 1595493..1595819 | + | 327 | WP_026042089.1 | hypothetical protein | - |
| DW68_RS07535 () | 1595824..1596858 | - | 1035 | WP_017362620.1 | GGDEF domain-containing protein | - |
| DW68_RS07540 () | 1597119..1597529 | - | 411 | WP_017362619.1 | GNAT family N-acetyltransferase | - |
| DW68_RS07545 () | 1597640..1597969 | - | 330 | WP_013716569.1 | DUF2025 family protein | - |
| DW68_RS07550 () | 1598067..1598468 | - | 402 | WP_013716568.1 | NUDIX domain-containing protein | - |
| DW68_RS07555 () | 1598510..1599211 | - | 702 | WP_017362618.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|