MGE detailed information
MGE type: Genomic_island MGE length: 47567 bp
Accession: NZ_CP013031 Location: 613285..660851 Organism: Escherichia coli strain H1827/12 Replicon: chromosome
Accession: NZ_CP013031 Location: 613285..660851 Organism: Escherichia coli strain H1827/12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB847_RS02915 () | 609122..609886 | - | 765 | WP_000998695.1 | gluconate 5-dehydrogenase | - |
| AB847_RS02920 () | 609910..610941 | - | 1032 | WP_001197411.1 | L-idonate 5-dehydrogenase | - |
| AB847_RS02925 () | 611158..611721 | + | 564 | WP_000896738.1 | gluconokinase | - |
| AB847_RS02930 () | 611725..612744 | - | 1020 | WP_001318460.1 | NADPH-dependent aldehyde reductase Ahr | - |
| AB847_RS02940 () | 613210..614475 | + | 1266 | Protein_537 | Prophage integrase IntA ; Integrase | Integrase |
| AB847_RS02945 () | 614792..615972 | - | 1181 | Protein_538 | phosphoethanolamine transferase | - |
| AB847_RS23750 () | 616559..616788 | + | 230 | Protein_539 | transposase domain-containing protein | - |
| AB847_RS26550 () | 617131..617274 | + | 144 | WP_000050905.1 | hypothetical protein | - |
| AB847_RS02965 () | 617302..618648 | - | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| AB847_RS02970 () | 619257..620474 | + | 1218 | WP_000179691.1 | MFS transporter | - |
| AB847_RS02975 () | 620486..621604 | + | 1119 | WP_000611568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| AB847_RS25385 () | 621647..621772 | + | 126 | WP_000594405.1 | hypothetical protein | - |
| AB847_RS02980 () | 621825..622082 | - | 258 | WP_000254999.1 | hypothetical protein | - |
| AB847_RS26005 () | 622072..622308 | + | 237 | Protein_546 | MFS transporter | - |
| AB847_RS02995 () | 622396..623562 | + | 1167 | Protein_547 | IS3 family transposase | - |
| AB847_RS26010 () | 623645..623902 | + | 258 | WP_000177057.1 | hypothetical protein | - |
| AB847_RS03005 () | 624459..625226 | - | 768 | WP_000175457.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| AB847_RS03010 () | 625227..626183 | - | 957 | WP_000684856.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| AB847_RS03015 () | 626180..627178 | - | 999 | WP_000125187.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| AB847_RS03020 () | 627175..628077 | - | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| AB847_RS03025 () | 628122..630446 | - | 2325 | WP_065273841.1 | Fe(3+) dicitrate transport protein FecA | - |
| AB847_RS03030 () | 630533..631486 | - | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| AB847_RS03035 () | 631483..632004 | - | 522 | WP_001283626.1 | putative RNA polymerase sigma factor FecI | VF |
| AB847_RS26555 () | 632141..632209 | + | 69 | WP_211180522.1 | protein YkiE | - |
| AB847_RS25395 () | 632296..632993 | + | 698 | Protein_557 | IS1 family transposase | - |
| AB847_RS26015 () | 633013..633078 | - | 66 | Protein_558 | omptin family outer membrane protease | - |
| AB847_RS23770 () | 633311..633415 | + | 105 | Protein_559 | IS3 family transposase | - |
| AB847_RS03060 () | 633754..634011 | + | 258 | WP_000555341.1 | hypothetical protein | - |
| AB847_RS03065 () | 634094..634791 | - | 698 | Protein_561 | IS1 family transposase IS1R | Transposase |
| AB847_RS03075 () | 634981..635763 | - | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| AB847_RS03080 () | 635780..636412 | - | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| AB847_RS03085 () | 636424..636855 | - | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| AB847_RS03090 () | 636986..637792 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| AB847_RS03095 () | 637805..639118 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| AB847_RS03100 () | 639130..639408 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| AB847_RS03105 () | 639405..640526 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| AB847_RS26560 () | 640771..640887 | - | 117 | Protein_569 | VOC family protein | - |
| AB847_RS25400 () | 640925..641143 | - | 219 | Protein_570 | hypothetical protein | - |
| AB847_RS03110 () | 641312..642058 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| AB847_RS03115 () | 642114..642659 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| AB847_RS03120 () | 642671..642928 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| AB847_RS26020 () | 643305..643550 | - | 246 | Protein_574 | GNAT family N-acetyltransferase | - |
| AB847_RS03135 () | 643666..644906 | + | 1241 | Protein_575 | helicase YjhR | - |
| AB847_RS03140 () | 645489..646469 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| AB847_RS03145 () | 646534..647640 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| AB847_RS03150 () | 647660..648376 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| AB847_RS03165 () | 649832..650314 | + | 483 | Protein_579 | Tyrosine recombinase XerC | VF |
| AB847_RS03170 () | 650323..651020 | - | 698 | Protein_580 | IS1 family transposase IS1R | Transposase |
| AB847_RS03175 () | 651077..651907 | + | 831 | Protein_581 | Outer membrane usher protein FimD | VF |
| AB847_RS03180 () | 651917..652447 | + | 531 | WP_001244827.1 | Protein FimF | VF |
| AB847_RS03185 () | 652460..652963 | + | 504 | WP_000870592.1 | Protein FimG | VF |
| AB847_RS03190 () | 652983..653885 | + | 903 | WP_000832247.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| AB847_RS03195 () | 654128..655471 | - | 1344 | WP_000558251.1 | gluconate permease GntP | - |
| AB847_RS03205 () | 655811..656995 | + | 1185 | WP_000438562.1 | mannonate dehydratase | - |
| AB847_RS03210 () | 657076..658536 | + | 1461 | WP_000208176.1 | fructuronate reductase | - |
| AB847_RS03220 () | 658751..659524 | + | 774 | WP_000833679.1 | Uxu operon transcriptional regulator | - |
| AB847_RS03225 () | 659665..660495 | - | 831 | WP_000062552.1 | YjfZ/YjiC family protein | - |
| AB847_RS26025 () | 661089..661172 | + | 84 | WP_120795393.1 | iraD leader peptide IdlP | - |
| AB847_RS03240 () | 661169..661561 | + | 393 | WP_001309187.1 | anti-adapter protein IraD | - |
| AB847_RS03245 () | 661554..662465 | - | 912 | WP_000340740.1 | hypochlorite stress DNA-binding transcriptional regulator HypT | - |
| AB847_RS03250 () | 662530..663702 | - | 1173 | WP_000568432.1 | beta-aspartyl-peptidase | - |
| AB847_RS03255 () | 663715..664176 | - | 462 | WP_000211971.1 | YjiG family protein | - |
| AB847_RS03260 () | 664173..664856 | - | 684 | WP_001295597.1 | nucleoside recognition pore and gate family inner membrane transporter | - |
| AB847_RS03265 () | 665106..665660 | + | 555 | WP_065273843.1 | RNA 2'-phosphotransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|