MGE detailed information
MGE type: Genomic_island MGE length: 66625 bp
Accession: NZ_CP013025 Location: 1646930..1713554 Organism: Escherichia coli strain 2009C-3133 Replicon: chromosome
Accession: NZ_CP013025 Location: 1646930..1713554 Organism: Escherichia coli strain 2009C-3133 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MJ49_RS09015 () | 1642367..1642705 | + | 339 | WP_000883405.1 | divalent cation tolerance protein CutA | - |
| MJ49_RS09020 () | 1642681..1644378 | + | 1698 | WP_060565029.1 | protein-disulfide reductase DsbD | - |
| MJ49_RS09025 () | 1644415..1644990 | + | 576 | WP_001317578.1 | transcriptional regulator | - |
| MJ49_RS09035 () | 1645370..1646632 | + | 1263 | WP_001218806.1 | integrase arm-type DNA-binding domain-containing protein | - |
| MJ49_RS09040 () | 1646930..1647442 | - | 513 | WP_021513350.1 | GTP-sensing transcriptional pleiotropic repressor CodY | VF |
| MJ49_RS09045 () | 1647977..1648396 | - | 420 | WP_000723766.1 | DEAD-box ATP-dependent RNA helicase CshA | VF |
| MJ49_RS09050 () | 1648412..1651000 | - | 2589 | WP_000554932.1 | hypothetical protein | VF |
| MJ49_RS09055 () | 1651169..1651936 | - | 768 | WP_000702043.1 | Soluble pyridine nucleotide transhydrogenase | VF |
| MJ49_RS09060 () | 1652014..1652358 | - | 345 | WP_001323645.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | VF |
| MJ49_RS09065 () | 1652901..1653089 | + | 189 | WP_000654305.1 | FaeA/PapI family transcriptional regulator | - |
| MJ49_RS28705 () | 1653184..1654221 | - | 1038 | Protein_1588 | IS66 family transposase ISEc8 | Transposase |
| MJ49_RS31670 () | 1654415..1654831 | + | 417 | Protein_1589 | IS21 family transposase ISEc12 | Transposase |
| MJ49_RS32735 () | 1654887..1655213 | + | 327 | WP_000165061.1 | IS3 family transposase IS1203 | Transposase |
| MJ49_RS09085 () | 1655210..1656100 | + | 891 | WP_200932633.1 | IS3 family transposase IS1203 | Transposase |
| MJ49_RS09090 () | 1656027..1657269 | + | 1243 | Protein_1592 | IS21 family transposase ISEc12 | Transposase |
| MJ49_RS09095 () | 1657284..1658030 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| MJ49_RS31675 () | 1658093..1658596 | - | 504 | Protein_1594 | DUF1705 domain-containing protein | - |
| MJ49_RS09105 () | 1658781..1659527 | - | 747 | WP_000755106.1 | porin family protein | - |
| MJ49_RS09110 () | 1659744..1660112 | - | 369 | WP_001275820.1 | hypothetical protein | - |
| MJ49_RS28730 () | 1660344..1660574 | + | 231 | WP_072141629.1 | integrase | - |
| MJ49_RS09115 () | 1660965..1662554 | + | 1590 | WP_001009620.1 | SIR2 family protein | - |
| MJ49_RS09120 () | 1662679..1663797 | - | 1119 | WP_000742121.1 | restriction endonuclease subunit S | - |
| MJ49_RS09125 () | 1663794..1665428 | - | 1635 | WP_000627725.1 | type I restriction-modification system subunit M | - |
| MJ49_RS09130 () | 1665492..1668905 | - | 3414 | WP_000438168.1 | DEAD/DEAH box helicase family protein | - |
| MJ49_RS09135 () | 1669513..1670027 | + | 515 | Protein_1602 | ISL3 family transposase ISEc38 | Transposase |
| MJ49_RS09140 () | 1670329..1670592 | - | 264 | WP_000676590.1 | MazG-like family protein | - |
| MJ49_RS09150 () | 1671059..1672141 | + | 1083 | WP_000637420.1 | XRE family transcriptional regulator | - |
| MJ49_RS09155 () | 1672144..1673088 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| MJ49_RS09160 () | 1673085..1674065 | - | 981 | WP_000174033.1 | thymidylate synthase | - |
| MJ49_RS09170 () | 1674233..1675394 | + | 1162 | Protein_1607 | IS3 family transposase IS3 | Transposase |
| MJ49_RS09175 () | 1675545..1676777 | + | 1233 | WP_000271620.1 | dNTP triphosphohydrolase | - |
| MJ49_RS09180 () | 1676878..1677447 | + | 570 | WP_000517640.1 | hypothetical protein | - |
| MJ49_RS09185 () | 1677864..1678298 | - | 435 | WP_000038249.1 | H-NS histone family protein | - |
| MJ49_RS09190 () | 1678712..1678885 | - | 174 | WP_157901039.1 | hypothetical protein | - |
| MJ49_RS09195 () | 1679021..1679194 | + | 174 | WP_000258195.1 | hypothetical protein | - |
| MJ49_RS09200 () | 1679191..1679535 | + | 345 | Protein_1613 | prop effector | - |
| MJ49_RS09205 () | 1679554..1680102 | - | 549 | WP_001167422.1 | hypothetical protein | - |
| MJ49_RS32740 () | 1680190..1680348 | - | 159 | WP_000831911.1 | hypothetical protein | - |
| MJ49_RS09210 () | 1680345..1680581 | - | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| MJ49_RS09215 () | 1680650..1681225 | - | 576 | WP_060565030.1 | hypothetical protein | - |
| MJ49_RS09220 () | 1681484..1682050 | - | 567 | WP_060565032.1 | inovirus-type Gp2 protein | - |
| MJ49_RS09225 () | 1683099..1684302 | + | 1204 | Protein_1619 | IS256 family transposase ISSod4 | Transposase |
| MJ49_RS09235 () | 1684482..1686530 | - | 2049 | WP_001534707.1 | TonB-dependent siderophore receptor IreA | - |
| MJ49_RS09240 () | 1686998..1687216 | - | 219 | WP_000281066.1 | hypothetical protein | - |
| MJ49_RS09245 () | 1687304..1688044 | - | 741 | WP_001075454.1 | inovirus Gp2 family protein | - |
| MJ49_RS28740 () | 1688820..1689170 | + | 351 | WP_001324367.1 | variant SH3 domain protein | - |
| MJ49_RS30780 () | 1689192..1690019 | + | 828 | Protein_1624 | transposase | - |
| MJ49_RS09265 () | 1691138..1691869 | + | 732 | WP_001324372.1 | hypothetical protein | - |
| MJ49_RS09270 () | 1691866..1692825 | - | 960 | WP_000126801.1 | hypothetical protein | - |
| MJ49_RS09275 () | 1692931..1693815 | + | 885 | WP_000010397.1 | 50S ribosome-binding GTPase | - |
| MJ49_RS09285 () | 1694018..1694698 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| MJ49_RS09290 () | 1694846..1695523 | + | 678 | WP_001097298.1 | hypothetical protein | - |
| MJ49_RS09295 () | 1695529..1695761 | + | 233 | Protein_1630 | DUF905 family protein | - |
| MJ49_RS09300 () | 1695851..1696669 | + | 819 | WP_020923987.1 | DUF945 domain-containing protein | - |
| MJ49_RS09305 () | 1696751..1697230 | + | 480 | WP_020923986.1 | antirestriction protein | - |
| MJ49_RS09310 () | 1697246..1697722 | + | 477 | WP_020923985.1 | RadC family protein | - |
| MJ49_RS09315 () | 1697785..1698006 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| MJ49_RS09320 () | 1698080..1698424 | + | 345 | WP_024143552.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| MJ49_RS09325 () | 1698461..1699702 | - | 1242 | WP_060565034.1 | group II intron reverse transcriptase/maturase | - |
| MJ49_RS31685 () | 1701544..1701627 | + | 84 | Protein_1638 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| MJ49_RS09345 () | 1701717..1702094 | + | 378 | WP_060565038.1 | type IV toxin-antitoxin system toxin CbtA | - |
| MJ49_RS09350 () | 1702091..1702579 | + | 489 | WP_000761721.1 | hypothetical protein | - |
| MJ49_RS09355 () | 1702591..1702788 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| MJ49_RS09360 () | 1702885..1703454 | + | 570 | WP_060565040.1 | DUF4942 domain-containing protein | - |
| MJ49_RS09365 () | 1704203..1705741 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| MJ49_RS09370 () | 1706107..1707441 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| MJ49_RS09375 () | 1707521..1709668 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| MJ49_RS09380 () | 1709727..1711184 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| MJ49_RS09385 () | 1711421..1712938 | + | 1518 | WP_000003805.1 | lysine--tRNA ligase | - |
| MJ49_RS09390 () | 1713057..1713230 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| MJ49_RS09395 () | 1713258..1713554 | - | 297 | WP_001317561.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| MJ49_RS09405 () | 1713781..1714053 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| MJ49_RS09410 () | 1714065..1714295 | - | 231 | WP_000371717.1 | (4Fe-4S)-binding protein | - |
| MJ49_RS09415 () | 1714475..1716106 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| MJ49_RS09420 () | 1716103..1716822 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|