MGE detailed information
MGE type: Genomic_island MGE length: 10115 bp
Accession: NZ_CP013006 Location: 2827347..2837461 Organism: Xanthomonas citri pv. malvacearum strain XcmN1003 Replicon: chromosome
Accession: NZ_CP013006 Location: 2827347..2837461 Organism: Xanthomonas citri pv. malvacearum strain XcmN1003 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APY30_RS12940 () | 2824270..2824446 | - | 177 | WP_033836587.1 | DUF3606 domain-containing protein | - |
| APY30_RS12945 () | 2824666..2825067 | + | 402 | WP_005913011.1 | H-NS histone family protein | - |
| APY30_RS12955 () | 2825355..2826446 | + | 1092 | WP_033836588.1 | site-specific integrase | - |
| APY30_RS12965 () | 2827347..2829014 | + | 1668 | Protein_2404 | hypothetical protein | VF |
| APY30_RS12970 () | 2829076..2830232 | + | 1157 | WP_087942126.1 | IS3 family transposase ISXc8 | Transposase |
| APY30_RS12975 () | 2830237..2830479 | - | 243 | Protein_2406 | IS3 family transposase | - |
| APY30_RS12985 () | 2830732..2834269 | + | 3538 | Protein_2407 | TAL effector repeat-containing protein | - |
| APY30_RS12990 () | 2834381..2834916 | - | 536 | Protein_2408 | IS3 family transposase ISXac2 | Transposase |
| APY30_RS12995 () | 2835129..2835308 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| APY30_RS13000 () | 2835579..2835899 | - | 321 | WP_099522003.1 | hypothetical protein | - |
| APY30_RS13005 () | 2835896..2836186 | - | 291 | WP_033836591.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| APY30_RS13010 () | 2836174..2836452 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| APY30_RS13015 () | 2836533..2836965 | - | 433 | Protein_2413 | relaxase | - |
| APY30_RS24270 () | 2836937..2837098 | - | 162 | WP_108350140.1 | hypothetical protein | - |
| APY30_RS13020 () | 2837174..2838330 | + | 1157 | WP_087942126.1 | IS3-like element ISXc8 family transposase | - |
| APY30_RS13025 () | 2838834..2839049 | + | 216 | Protein_2416 | SAM-dependent DNA methyltransferase | - |
| APY30_RS13035 () | 2839572..2840659 | + | 1088 | WP_087943923.1 | IS3-like element ISXac2 family transposase | - |
| APY30_RS24830 () | 2840746..2840913 | + | 168 | WP_005913009.1 | hypothetical protein | - |
| APY30_RS13040 () | 2841205..2842311 | + | 1107 | WP_179119000.1 | diguanylate cyclase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|