MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 107170 bp
Accession: NZ_CP012965 Location: 1..107170 Organism: Cereibacter sphaeroides strain MBTLJ-8 Replicon: plasmid unnamed_4
Accession: NZ_CP012965 Location: 1..107170 Organism: Cereibacter sphaeroides strain MBTLJ-8 Replicon: plasmid unnamed_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APX01_RS23070 () | 46..531 | - | 486 | WP_011331414.1 | hypothetical protein | - |
| APX01_RS21235 () | 896..1537 | + | 642 | WP_011331413.1 | helix-turn-helix transcriptional regulator | - |
| APX01_RS21240 () | 1746..2468 | + | 723 | WP_011331412.1 | Transcriptional regulatory protein DegU | VF |
| APX01_RS21245 () | 2502..2768 | + | 267 | WP_011331411.1 | hypothetical protein | - |
| APX01_RS21250 () | 2981..3644 | - | 664 | Protein_5 | response regulator transcription factor | - |
| APX01_RS21255 () | 4560..5114 | + | 555 | WP_011331409.1 | hypothetical protein | - |
| APX01_RS21260 () | 5119..5871 | - | 753 | WP_011331408.1 | porin family protein | - |
| APX01_RS21265 () | 6503..6877 | + | 375 | WP_017140494.1 | hypothetical protein | - |
| APX01_RS21270 () | 7426..7644 | + | 219 | WP_017140495.1 | hypothetical protein | - |
| APX01_RS21275 () | 7788..8048 | - | 261 | WP_030002946.1 | WGR domain-containing protein | - |
| APX01_RS21280 () | 8553..9746 | - | 1194 | WP_017140497.1 | AAA family ATPase | - |
| APX01_RS21285 () | 10657..10875 | + | 219 | WP_017140498.1 | hypothetical protein | - |
| APX01_RS21290 () | 10875..11654 | + | 780 | WP_011331406.1 | hypothetical protein | - |
| APX01_RS21295 () | 11771..12814 | - | 1044 | WP_011331405.1 | nucleotidyltransferase domain-containing protein | - |
| APX01_RS21300 () | 13189..13674 | - | 486 | WP_017208417.1 | hypothetical protein | - |
| APX01_RS21305 () | 14367..17054 | - | 2688 | WP_017140500.1 | hypothetical protein | - |
| APX01_RS21310 () | 17339..18146 | + | 808 | Protein_17 | hypothetical protein | - |
| APX01_RS21315 () | 18163..18342 | - | 180 | WP_017140501.1 | hypothetical protein | - |
| APX01_RS21320 () | 18796..20127 | + | 1332 | WP_017140502.1 | YadA-like family protein | - |
| APX01_RS21325 () | 20191..20652 | + | 462 | WP_011331401.1 | hypothetical protein | - |
| APX01_RS21330 () | 20793..21476 | - | 684 | WP_011331400.1 | cytochrome c-type protein NapC | - |
| APX01_RS21335 () | 21478..21942 | - | 465 | WP_011331399.1 | nitrate reductase cytochrome c-type subunit | - |
| APX01_RS21340 () | 21945..24440 | - | 2496 | WP_011331398.1 | periplasmic nitrate reductase subunit alpha | - |
| APX01_RS21345 () | 24437..24703 | - | 267 | WP_011331397.1 | chaperone NapD | - |
| APX01_RS21350 () | 24696..25178 | - | 483 | WP_011331396.1 | ferredoxin-type protein NapF | - |
| APX01_RS21355 () | 25184..25366 | - | 183 | WP_011331395.1 | periplasmic nitrate reductase, NapE protein | - |
| APX01_RS21360 () | 25377..25559 | - | 183 | WP_017140504.1 | hypothetical protein | - |
| APX01_RS23520 () | 25728..25863 | + | 136 | Protein_28 | IS3 family transposase | - |
| APX01_RS21365 () | 25955..28750 | - | 2796 | WP_061350905.1 | Phytochrome-like protein cph2 | VF |
| APX01_RS21370 () | 28818..29411 | - | 594 | WP_011331449.1 | biliverdin-producing heme oxygenase | - |
| APX01_RS21375 () | 30124..31008 | + | 885 | WP_011331391.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| APX01_RS21380 () | 31417..32469 | - | 1053 | WP_011331390.1 | ParB N-terminal domain-containing protein | - |
| APX01_RS21385 () | 32469..33776 | - | 1308 | WP_011331389.1 | AAA family ATPase | - |
| APX01_RS21390 () | 34137..34847 | + | 711 | WP_011331388.1 | hypothetical protein | - |
| APX01_RS23080 () | 35113..35421 | + | 309 | Protein_35 | IS5 family transposase ISSpo7 | Transposase |
| APX01_RS23085 () | 35432..35720 | + | 289 | Protein_36 | IS5 family transposase ISSpo7 | Transposase |
| APX01_RS21395 () | 36114..36350 | + | 237 | WP_017140462.1 | hypothetical protein | - |
| APX01_RS23095 () | 36439..36678 | + | 240 | WP_080588244.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| APX01_RS21400 () | 36675..37067 | + | 393 | WP_011331387.1 | type II toxin-antitoxin system VapC family toxin | - |
| APX01_RS23525 () | 37802..37954 | - | 153 | Protein_40 | IS5/IS1182 family transposase | - |
| APX01_RS23105 () | 38397..39158 | + | 762 | WP_081111719.1 | PGL/p-HBAD biosynthesis glycosyltransferase | VF |
| APX01_RS21405 () | 39155..40276 | + | 1122 | WP_061350906.1 | GDP-mannose 4,6-dehydratase | VF |
| APX01_RS21410 () | 40280..41242 | + | 963 | WP_011331384.1 | GDP-L-fucose synthase | VF |
| APX01_RS21415 () | 41459..43153 | - | 1695 | WP_011331383.1 | recombinase family protein | - |
| APX01_RS21420 () | 43168..43830 | - | 663 | WP_011331382.1 | hypothetical protein | - |
| APX01_RS23710 () | 43921..44073 | - | 153 | WP_017140463.1 | hypothetical protein | - |
| APX01_RS21425 () | 44202..44636 | - | 435 | WP_011331381.1 | hypothetical protein | - |
| APX01_RS21430 () | 44693..45268 | - | 576 | WP_011331380.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| APX01_RS21435 () | 45805..47226 | + | 1422 | WP_011331379.1 | hypothetical protein | Relaxase |
| APX01_RS21440 () | 47309..47662 | + | 354 | WP_011331378.1 | glycoside hydrolase | - |
| APX01_RS21445 () | 48240..49585 | + | 1346 | Protein_51 | IS5 family transposase ISRhsp1 | Transposase |
| APX01_RS23715 () | 49885..51870 | + | 1986 | WP_172825292.1 | methyltransferase domain-containing protein | - |
| APX01_RS23125 () | 52560..53849 | + | 1290 | WP_011331374.1 | hypothetical protein | - |
| APX01_RS23130 () | 53947..55083 | + | 1137 | WP_011331373.1 | glycosyltransferase | - |
| APX01_RS23135 () | 55147..56274 | - | 1128 | Protein_55 | IS630 family transposase | - |
| APX01_RS23140 () | 56664..57218 | + | 555 | WP_011331372.1 | putative colanic acid biosynthesis acetyltransferase | - |
| APX01_RS21465 () | 57709..57810 | + | 102 | Protein_57 | IS3 family transposase ISKpn40 | Transposase |
| APX01_RS21470 () | 58660..59742 | + | 1083 | WP_011331371.1 | hypothetical protein | VF |
| APX01_RS21475 () | 59752..60195 | + | 444 | WP_017140467.1 | Low molecular weight protein-tyrosine-phosphatase Wzb | VF |
| APX01_RS21480 () | 60192..62393 | + | 2202 | WP_011331369.1 | Tyrosine-protein kinase etk | VF |
| APX01_RS21485 () | 62856..63290 | - | 435 | WP_011331368.1 | glycine zipper family protein | - |
| APX01_RS21490 () | 63746..64810 | + | 1065 | WP_011331367.1 | acyltransferase | - |
| APX01_RS21495 () | 65334..65549 | + | 216 | WP_017140469.1 | hypothetical protein | - |
| APX01_RS21500 () | 66125..66832 | - | 708 | WP_011331366.1 | RES family NAD+ phosphorylase | - |
| APX01_RS21505 () | 66829..67230 | - | 402 | WP_030002945.1 | MbcA/ParS/Xre antitoxin family protein | - |
| APX01_RS21510 () | 67272..69302 | + | 2031 | WP_017140471.1 | tetratricopeptide repeat protein | - |
| APX01_RS23150 () | 69608..69775 | - | 168 | Protein_67 | Hsp20/alpha crystallin family protein | - |
| APX01_RS21515 () | 69807..72431 | - | 2625 | WP_017140473.1 | putative cation-transporting ATPase F | VF |
| APX01_RS23155 () | 72440..72598 | - | 159 | WP_017140474.1 | Cyclopentanol dehydrogenase | VF |
| APX01_RS21520 () | 72920..73327 | - | 408 | WP_011331362.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| APX01_RS21525 () | 73327..73557 | - | 231 | WP_011331361.1 | antitoxin | Antitoxin Detail |
| APX01_RS21530 () | 73946..74779 | - | 834 | WP_017140476.1 | hypothetical protein | - |
| APX01_RS21535 () | 74992..75417 | - | 426 | WP_011331359.1 | hypothetical protein | - |
| APX01_RS21540 () | 75705..76130 | + | 426 | WP_011331358.1 | helix-turn-helix transcriptional regulator | - |
| APX01_RS21545 () | 76694..77581 | + | 888 | WP_011331357.1 | viral aspartic protease | - |
| APX01_RS21550 () | 77578..78666 | + | 1089 | WP_011331356.1 | hypothetical protein | - |
| APX01_RS21555 () | 78765..79100 | - | 336 | WP_017140477.1 | hypothetical protein | - |
| APX01_RS21560 () | 79530..80978 | - | 1449 | WP_011331354.1 | caspase family protein | - |
| APX01_RS21565 () | 80994..81488 | - | 495 | WP_017140478.1 | hypothetical protein | - |
| APX01_RS21570 () | 81583..81975 | - | 393 | WP_011331352.1 | hypothetical protein | - |
| APX01_RS21575 () | 82243..83289 | - | 1047 | WP_011331351.1 | hypothetical protein | - |
| APX01_RS23720 () | 83334..83684 | - | 351 | WP_017140479.1 | hypothetical protein | - |
| APX01_RS21585 () | 84070..85098 | + | 1029 | WP_017140480.1 | hypothetical protein | - |
| APX01_RS21590 () | 85114..85734 | - | 621 | WP_011331348.1 | hypothetical protein | - |
| APX01_RS23725 () | 85846..86007 | + | 162 | WP_017140481.1 | hypothetical protein | - |
| APX01_RS21595 () | 86458..86826 | + | 369 | WP_017140482.1 | hypothetical protein | - |
| APX01_RS21600 () | 86957..87328 | - | 372 | WP_011331346.1 | hypothetical protein | - |
| APX01_RS21605 () | 87346..89424 | - | 2079 | WP_011331345.1 | hypothetical protein | - |
| APX01_RS21610 () | 89541..90050 | - | 510 | WP_011331344.1 | hypothetical protein | - |
| APX01_RS21615 () | 90711..90947 | + | 237 | WP_017140483.1 | hypothetical protein | - |
| APX01_RS21620 () | 91033..91437 | - | 405 | WP_011331343.1 | BLUF domain-containing protein | - |
| APX01_RS21625 () | 91668..93017 | - | 1350 | WP_017140484.1 | HipA domain-containing protein | - |
| APX01_RS21630 () | 93020..93280 | - | 261 | WP_017140485.1 | helix-turn-helix transcriptional regulator | - |
| APX01_RS21635 () | 93371..93592 | + | 222 | WP_017140486.1 | hypothetical protein | - |
| APX01_RS23165 () | 93992..94408 | - | 417 | WP_160384194.1 | translation initiation factor 2 GTPase | - |
| APX01_RS23170 () | 95009..95527 | + | 519 | WP_011331339.1 | hypothetical protein | - |
| APX01_RS21645 () | 95800..96117 | - | 318 | WP_011331338.1 | H-NS histone family protein | - |
| APX01_RS21650 () | 96717..97031 | - | 315 | WP_011331337.1 | H-NS histone family protein | - |
| APX01_RS21655 () | 97585..98817 | + | 1233 | WP_011331336.1 | aldo/keto reductase | - |
| APX01_RS21660 () | 99302..100729 | + | 1428 | WP_061350907.1 | Alginate biosynthesis protein AlgA | VF |
| APX01_RS21665 () | 100731..102120 | + | 1390 | Protein_101 | Phosphoglucosamine mutase | VF |
| APX01_RS23730 () | 102215..102495 | - | 281 | Protein_102 | hypothetical protein | - |
| APX01_RS23180 () | 102956..103408 | + | 453 | WP_081111720.1 | excalibur calcium-binding domain-containing protein | - |
| APX01_RS21670 () | 103774..105149 | + | 1376 | Protein_104 | ISNCY family transposase | - |
| APX01_RS23185 () | 105461..105825 | + | 365 | Protein_105 | polymer-forming cytoskeletal protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|