MGE detailed information
MGE type: IScluster/Tn MGE length: 9482 bp
Accession: NZ_CP012947 Location: 2717585..2727066 Organism: Xanthomonas oryzae pv. oryzae strain PXO83 Replicon: chromosome
Accession: NZ_CP012947 Location: 2717585..2727066 Organism: Xanthomonas oryzae pv. oryzae strain PXO83 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APZ20_RS12805 () | 2714274..2715365 | + | 1092 | WP_011408756.1 | ribonuclease D | - |
| APZ20_RS12810 () | 2715462..2715778 | - | 317 | Protein_2418 | ATP-dependent DNA ligase | - |
| APZ20_RS27945 () | 2715838..2716044 | - | 207 | Protein_2419 | hypothetical protein | - |
| APZ20_RS25035 () | 2716060..2716236 | - | 177 | Protein_2420 | DUF3606 domain-containing protein | - |
| APZ20_RS12820 () | 2716458..2716859 | + | 402 | WP_011259345.1 | H-NS histone family protein | - |
| APZ20_RS12830 () | 2717283..2718757 | - | 1475 | Protein_2422 | IS5 family transposase ISXoo5 | Transposase |
| APZ20_RS12835 () | 2719335..2719514 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| APZ20_RS25040 () | 2719785..2720039 | - | 255 | WP_198912806.1 | hypothetical protein | - |
| APZ20_RS12845 () | 2720116..2720406 | - | 291 | WP_027703932.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| APZ20_RS12850 () | 2720394..2720672 | - | 279 | WP_011408759.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| APZ20_RS28140 () | 2720753..2720956 | - | 204 | WP_198912807.1 | hypothetical protein | - |
| APZ20_RS28145 () | 2720868..2721212 | - | 345 | WP_198912817.1 | hypothetical protein | - |
| APZ20_RS25050 () | 2721157..2721357 | - | 201 | WP_027703931.1 | ribbon-helix-helix protein, CopG family | - |
| APZ20_RS12855 () | 2721606..2722562 | - | 957 | WP_041182719.1 | IS30 family transposase IS1112b | Transposase |
| APZ20_RS12860 () | 2722964..2723932 | - | 969 | WP_012445118.1 | IS5 family transposase ISXo1 | Transposase |
| APZ20_RS12865 () | 2724336..2725520 | - | 1185 | WP_011408397.1 | IS256 family transposase IS1113 | Transposase |
| APZ20_RS12870 () | 2726101..2727066 | + | 966 | WP_109181970.1 | IS1595 family transposase ISXo5 | Transposase |
| APZ20_RS25055 () | 2727168..2727773 | + | 606 | Protein_2434 | DNA-3-methyladenine glycosylase | - |
| APZ20_RS26945 () | 2727725..2729292 | - | 1568 | Protein_2435 | ATP-dependent DNA helicase | - |
| APZ20_RS12880 () | 2729569..2731404 | - | 1836 | Protein_2436 | ATP-dependent DNA helicase | - |
| APZ20_RS12885 () | 2731631..2731975 | + | 345 | WP_042465594.1 | DUF3301 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|