MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 96042 bp
Accession: NZ_CP012929 Location: 1..96042 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 Replicon: plasmid p12-4374_96
Accession: NZ_CP012929 Location: 1..96042 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 Replicon: plasmid p12-4374_96
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APS45_RS23825 () | 455..1486 | + | 1032 | WP_000907873.1 | replication initiation protein | - |
| APS45_RS23830 () | 2395..2664 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| APS45_RS23835 () | 2661..2942 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| APS45_RS23840 () | 2982..3830 | + | 849 | WP_001057991.1 | 3'-5' exonuclease | - |
| APS45_RS23845 () | 3947..4420 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| APS45_RS27020 () | 4897..5163 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| APS45_RS23855 () | 5163..5657 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| APS45_RS23860 () | 5713..6315 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| APS45_RS23865 () | 6669..8015 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| APS45_RS23870 () | 8294..10174 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| APS45_RS23875 () | 10192..10539 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| APS45_RS27025 () | 10658..10894 | + | 237 | WP_072756822.1 | hypothetical protein | - |
| APS45_RS23885 () | 11047..12309 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| APS45_RS23890 () | 12633..13778 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| APS45_RS23895 () | 14106..14696 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| APS45_RS23900 () | 14696..14950 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| APS45_RS23905 () | 15302..16303 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| APS45_RS23910 () | 16479..16823 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| APS45_RS23915 () | 17322..17576 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| APS45_RS23920 () | 17621..18547 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| APS45_RS23925 () | 19079..19492 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| APS45_RS23930 () | 19494..20273 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| APS45_RS23935 () | 20453..21097 | + | 645 | WP_001144036.1 | ParA family protein | - |
| APS45_RS23940 () | 21184..21492 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| APS45_RS23945 () | 21906..22886 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| APS45_RS23950 () | 22879..23295 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| APS45_RS23955 () | 23297..24571 | - | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| APS45_RS23960 () | 24571..25008 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| APS45_RS23965 () | 25005..25253 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| APS45_RS23970 () | 25671..26573 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| APS45_RS26800 () | 26570..26881 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| APS45_RS23975 () | 26958..27641 | + | 684 | WP_000086178.1 | DNA methylase | - |
| APS45_RS23980 () | 27642..27863 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| APS45_RS23985 () | 27875..28309 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| APS45_RS26805 () | 28360..29130 | + | 771 | WP_024133193.1 | hypothetical protein | - |
| APS45_RS24000 () | 29548..29973 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| APS45_RS24005 () | 30020..30442 | + | 423 | WP_000271725.1 | DUF1380 family protein | - |
| APS45_RS24010 () | 30439..30630 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| APS45_RS27085 () | 30963..31031 | - | 69 | Protein_38 | pilus protein | - |
| APS45_RS24020 () | 31400..31927 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| APS45_RS24025 () | 31985..32218 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| APS45_RS24030 () | 32277..34235 | + | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| APS45_RS24035 () | 34290..34724 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| APS45_RS24040 () | 34721..35440 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| APS45_RS24045 () | 35570..36745 | + | 1176 | WP_000942657.1 | transposase | - |
| APS45_RS26835 () | 37192..37692 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| APS45_RS24055 () | 38421..38855 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| APS45_RS25960 () | 38947..39213 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| APS45_RS24065 () | 39278..40180 | + | 903 | WP_039005633.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| APS45_RS24070 () | 40180..40461 | + | 282 | WP_001334682.1 | hypothetical protein | - |
| APS45_RS24075 () | 40492..40743 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| APS45_RS24080 () | 41324..42172 | + | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| APS45_RS24085 () | 42258..42593 | - | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| APS45_RS24090 () | 42827..43159 | + | 333 | WP_052940647.1 | IncI1-type relaxosome accessory protein NikA | - |
| APS45_RS24095 () | 43170..45869 | + | 2700 | WP_001474686.1 | IncI1-type relaxase NikB | - |
| APS45_RS24100 () | 45906..48197 | - | 2292 | WP_001289271.1 | hypothetical protein | - |
| APS45_RS24105 () | 48190..49260 | - | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| APS45_RS24110 () | 49279..50487 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| APS45_RS24115 () | 50779..50931 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| APS45_RS24120 () | 51003..51254 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| APS45_RS27030 () | 52178..52354 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| APS45_RS24125 () | 52746..52955 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| APS45_RS24130 () | 53027..53689 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| APS45_RS24135 () | 53760..55928 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| APS45_RS24140 () | 56025..56609 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| APS45_RS24145 () | 56638..57840 | - | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| APS45_RS25970 () | 57807..58421 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| APS45_RS24150 () | 58421..61465 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| APS45_RS24155 () | 61555..62355 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| APS45_RS24160 () | 62339..62527 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| APS45_RS24165 () | 62591..62995 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| APS45_RS24170 () | 63046..63573 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| APS45_RS24175 () | 63573..64277 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| APS45_RS24180 () | 64277..65566 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| APS45_RS24185 () | 65569..66552 | - | 984 | WP_001191878.1 | IncI1-type conjugal transfer protein TraN | - |
| APS45_RS24190 () | 66563..67255 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| APS45_RS24195 () | 67252..67599 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| APS45_RS24200 () | 67617..71384 | - | 3768 | WP_001141535.1 | hypothetical protein | - |
| APS45_RS24205 () | 71474..72025 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| APS45_RS25975 () | 72040..72330 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| APS45_RS24210 () | 72327..73475 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| APS45_RS24215 () | 73472..74290 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| APS45_RS24220 () | 74287..74745 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| APS45_RS24225 () | 75140..75724 | - | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| APS45_RS24230 () | 75784..76986 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| APS45_RS24235 () | 77072..77896 | - | 825 | WP_001238927.1 | hypothetical protein | - |
| APS45_RS24240 () | 78047..79201 | - | 1155 | WP_001139958.1 | integrase | - |
| APS45_RS27035 () | 79811..80008 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| APS45_RS24255 () | 80005..81429 | - | 1425 | WP_023278060.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| APS45_RS25985 () | 81429..82085 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| APS45_RS24260 () | 82070..82630 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| APS45_RS24265 () | 82640..83254 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| APS45_RS24270 () | 83272..84369 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| APS45_RS24275 () | 84382..85935 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| APS45_RS24280 () | 85946..86398 | - | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| APS45_RS24285 () | 86385..87680 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| APS45_RS24290 () | 87673..89355 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| APS45_RS24295 () | 89369..89806 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| APS45_RS25990 () | 89806..90873 | - | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| APS45_RS24305 () | 91547..91999 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| APS45_RS24310 () | 92042..92296 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| APS45_RS24315 () | 92564..93130 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| APS45_RS24320 () | 93144..93827 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| APS45_RS24325 () | 94081..94614 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| APS45_RS24330 () | 95056..95343 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| APS45_RS26010 () | 95261..95524 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|