MGE detailed information
MGE type: Genomic_island MGE length: 9441 bp
Accession: NZ_CP012802 Location: 3879973..3889413 Organism: Escherichia coli O157:H7 strain WS4202 Replicon: chromosome
Accession: NZ_CP012802 Location: 3879973..3889413 Organism: Escherichia coli O157:H7 strain WS4202 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AO055_RS19965 () | 3875805..3877136 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| AO055_RS19970 () | 3877158..3878147 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| AO055_RS19975 () | 3878246..3879184 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| AO055_RS32270 () | 3879499..3879717 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| AO055_RS19985 () | 3879973..3880512 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| AO055_RS19990 () | 3880534..3881721 | + | 1188 | WP_000484642.1 | YhaC family protein | - |
| AO055_RS20000 () | 3882237..3883382 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| AO055_RS20005 () | 3883479..3884369 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| AO055_RS20010 () | 3884399..3885169 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| AO055_RS20015 () | 3885185..3886519 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| AO055_RS20020 () | 3886894..3888465 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| AO055_RS20025 () | 3888614..3888949 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| AO055_RS20030 () | 3888949..3889413 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| AO055_RS20035 () | 3889468..3890277 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| AO055_RS20040 () | 3890526..3891806 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| AO055_RS20045 () | 3891829..3892302 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| AO055_RS20050 () | 3892313..3893092 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| AO055_RS20055 () | 3893082..3893960 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| AO055_RS20060 () | 3893978..3894412 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.002 |