MGE detailed information
MGE type: Prophage MGE length: 42713 bp
Accession: NZ_CP012735 Location: 2861575..2904287 Organism: Shigella flexneri 1a strain 0228 Replicon: chromosome
Accession: NZ_CP012735 Location: 2861575..2904287 Organism: Shigella flexneri 1a strain 0228 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOT98_RS29210 () | 2856701..2858328 | + | 1628 | Protein_2722 | toxic metabolite efflux MATE transporter YeeO | - |
| AOT98_RS15525 () | 2858960..2859676 | - | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| AOT98_RS15530 () | 2860019..2861473 | - | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| AOT98_RS15535 () | 2861575..2861781 | - | 207 | WP_000466572.1 | hypothetical protein | - |
| AOT98_RS15540 () | 2861782..2862981 | - | 1200 | Protein_2726 | IS3 family transposase | - |
| AOT98_RS27545 () | 2863067..2863755 | + | 689 | Protein_2727 | IS3-like element IS911 family transposase | - |
| AOT98_RS15560 () | 2864428..2865936 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| AOT98_RS15565 () | 2866017..2866505 | + | 489 | Protein_2729 | IS3 family transposase | - |
| AOT98_RS15570 () | 2866612..2867874 | - | 1263 | Protein_2730 | tyrosine-type recombinase/integrase | - |
| AOT98_RS15580 () | 2868212..2869009 | - | 798 | WP_001325918.1 | DgsA anti-repressor MtfA | - |
| AOT98_RS15590 () | 2869220..2870270 | - | 1051 | Protein_2732 | tyrosine-type recombinase/integrase | - |
| AOT98_RS15595 () | 2870270..2870410 | - | 141 | Protein_2733 | DUF4224 domain-containing protein | - |
| AOT98_RS15600 () | 2870437..2870853 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - | 2871435..2871493 | - | 59 | - | - | Antitoxin Detail |
| AOT98_RS15610 () | 2871505..2871660 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| AOT98_RS27570 () | 2871828..2872106 | + | 279 | WP_011069426.1 | hypothetical protein | - |
| AOT98_RS15620 () | 2872108..2873166 | + | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| AOT98_RS15625 () | 2873167..2873532 | + | 366 | WP_000140020.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AOT98_RS15630 () | 2873529..2874217 | + | 689 | Protein_2739 | bacteriophage antitermination protein Q | - |
| AOT98_RS15655 () | 2875013..2875228 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| AOT98_RS15660 () | 2875327..2876001 | + | 675 | WP_004967157.1 | IS66-like element accessory protein TnpA | - |
| AOT98_RS15665 () | 2875998..2876348 | + | 351 | WP_005049241.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| AOT98_RS15670 () | 2876345..2876842 | + | 498 | Protein_2743 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| AOT98_RS15675 () | 2876898..2877595 | + | 698 | WP_223368647.1 | IS1 family transposase | - |
| AOT98_RS27580 () | 2877611..2877934 | + | 324 | Protein_2745 | transposase | - |
| AOT98_RS15690 () | 2878000..2879156 | + | 1157 | WP_094081529.1 | IS3-like element IS600 family transposase | - |
| AOT98_RS15695 () | 2879181..2879540 | + | 360 | Protein_2747 | hypothetical protein | - |
| AOT98_RS15700 () | 2879550..2879711 | + | 162 | WP_000497744.1 | DUF2635 domain-containing protein | - |
| AOT98_RS15705 () | 2879708..2881204 | + | 1497 | WP_000155743.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| AOT98_RS15710 () | 2881204..2881560 | + | 357 | WP_001062338.1 | phage tail tube protein | - |
| AOT98_RS15715 () | 2881560..2881895 | + | 336 | WP_001251340.1 | phage tail assembly protein | - |
| AOT98_RS15720 () | 2881980..2883929 | + | 1950 | WP_000785377.1 | phage tail tape measure protein | - |
| AOT98_RS26040 () | 2883997..2884479 | + | 483 | WP_000594909.1 | hypothetical protein | - |
| AOT98_RS15735 () | 2885327..2886184 | + | 858 | Protein_2755 | IS3 family transposase | - |
| AOT98_RS15740 () | 2886225..2886704 | + | 480 | Protein_2756 | DUF4376 domain-containing protein | - |
| AOT98_RS15750 () | 2886884..2888527 | - | 1644 | WP_014532281.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4/H7 | - |
| AOT98_RS15755 () | 2888843..2889511 | - | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| AOT98_RS15760 () | 2889568..2889837 | + | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| AOT98_RS15770 () | 2890915..2891565 | - | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| AOT98_RS15775 () | 2891823..2892458 | - | 636 | WP_001240061.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| AOT98_RS15780 () | 2892459..2893463 | - | 1005 | Protein_2762 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| AOT98_RS15785 () | 2893572..2893985 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| AOT98_RS15790 () | 2894118..2894789 | + | 672 | WP_001347103.1 | response regulator transcription factor HprR | - |
| AOT98_RS15795 () | 2894789..2896147 | + | 1359 | WP_000826714.1 | two-component system sensor histidine kinase HprS | - |
| AOT98_RS15800 () | 2896255..2897106 | - | 852 | WP_000218218.1 | protein deglycase HchA | - |
| AOT98_RS15815 () | 2898477..2898656 | - | 180 | Protein_2768 | porin | - |
| AOT98_RS15825 () | 2898750..2899978 | + | 1229 | WP_111778310.1 | IS3 family transposase | - |
| AOT98_RS15830 () | 2899987..2900751 | - | 765 | Protein_2770 | porin | - |
| AOT98_RS15840 () | 2900817..2901964 | + | 1148 | WP_094081536.1 | IS3 family transposase | - |
| AOT98_RS15845 () | 2901965..2902222 | + | 258 | WP_032155863.1 | cell division protein DrpB | - |
| AOT98_RS15850 () | 2902301..2902802 | + | 502 | Protein_2773 | HD domain-containing protein | - |
| AOT98_RS15855 () | 2902869..2904287 | + | 1419 | WP_001157215.1 | DNA-cytosine methyltransferase | - |
| AOT98_RS15860 () | 2904268..2904738 | + | 471 | WP_000228688.1 | VSPR family DNA mismatch endonuclease | - |
| AOT98_RS15865 () | 2904727..2905647 | - | 921 | WP_001212270.1 | drug/metabolite exporter YedA | - |
| AOT98_RS15870 () | 2905820..2906737 | + | 918 | WP_000922688.1 | DUF808 domain-containing protein | - |
| AOT98_RS15875 () | 2906816..2906998 | + | 183 | WP_000009302.1 | DUF2158 domain-containing protein | - |
| AOT98_RS15885 () | 2907169..2908863 | + | 1695 | Protein_2779 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|