MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 78380 bp
Accession: NZ_CP012700 Location: 450298..528677 Organism: Sphingopyxis macrogoltabida strain EY-1 Replicon: chromosome
Accession: NZ_CP012700 Location: 450298..528677 Organism: Sphingopyxis macrogoltabida strain EY-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN936_RS02150 () | 445557..446546 | - | 990 | WP_054586708.1 | FecR domain-containing protein | - |
| AN936_RS23930 () | 446543..447247 | - | 705 | WP_084758120.1 | RNA polymerase sigma factor | - |
| AN936_RS02160 () | 447405..448016 | - | 612 | WP_054586709.1 | GntR family transcriptional regulator | - |
| AN936_RS02165 () | 448013..448891 | - | 879 | WP_054586710.1 | phytanoyl-CoA dioxygenase family protein | - |
| AN936_RS02170 () | 448888..449511 | - | 624 | WP_054586711.1 | autoinducer synthase | - |
| AN936_RS02175 () | 449610..450368 | - | 759 | WP_084758121.1 | LuxR family transcriptional regulator | - |
| AN936_RS02185 () | 451007..451651 | - | 645 | WP_054586713.1 | SOS response-associated peptidase family protein | - |
| AN936_RS02190 () | 451679..452191 | - | 513 | WP_054586714.1 | DUF159 family protein | - |
| AN936_RS02195 () | 452204..452533 | - | 330 | WP_054586715.1 | hypothetical protein | - |
| AN936_RS02200 () | 452535..452726 | - | 192 | WP_054586716.1 | hypothetical protein | - |
| AN936_RS02205 () | 452903..453901 | + | 999 | WP_084758122.1 | DUF1738 domain-containing protein | - |
| AN936_RS02210 () | 453898..454299 | + | 402 | WP_054586717.1 | DUF2958 domain-containing protein | - |
| AN936_RS02215 () | 454418..456550 | + | 2133 | WP_084758123.1 | ParB/RepB/Spo0J family partition protein | - |
| AN936_RS02220 () | 456751..457779 | + | 1029 | WP_054586718.1 | toprim domain-containing protein | - |
| AN936_RS02225 () | 458035..458253 | + | 219 | WP_054586719.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| AN936_RS02230 () | 458250..459506 | + | 1257 | WP_054586720.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| AN936_RS02235 () | 459587..459778 | + | 192 | WP_158213708.1 | hypothetical protein | - |
| AN936_RS02240 () | 460058..460999 | + | 942 | WP_054586722.1 | DUF2493 domain-containing protein | - |
| AN936_RS02245 () | 461065..461988 | + | 924 | WP_054586723.1 | nucleotidyltransferase and HEPN domain-containing protein | - |
| AN936_RS02250 () | 461985..462824 | + | 840 | WP_054586724.1 | NYN domain-containing protein | - |
| AN936_RS02255 () | 463569..463967 | + | 399 | WP_054586725.1 | DUF3703 domain-containing protein | - |
| AN936_RS02260 () | 463964..464350 | + | 387 | WP_149037572.1 | hypothetical protein | - |
| AN936_RS02265 () | 464442..465614 | + | 1173 | WP_054586727.1 | TolC family protein | - |
| AN936_RS02270 () | 465628..466797 | + | 1170 | WP_149037573.1 | efflux RND transporter periplasmic adaptor subunit | - |
| AN936_RS02275 () | 466799..470077 | + | 3279 | WP_054586728.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| AN936_RS02280 () | 470161..470565 | + | 405 | WP_054586729.1 | DUF305 domain-containing protein | - |
| AN936_RS02285 () | 470567..471196 | + | 630 | WP_054586730.1 | cation diffusion facilitator family transporter | - |
| AN936_RS02290 () | 471433..471876 | + | 444 | WP_054586731.1 | hypothetical protein | - |
| AN936_RS02295 () | 472063..474603 | + | 2541 | WP_054590050.1 | heavy metal translocating P-type ATPase | - |
| AN936_RS02300 () | 474649..475137 | + | 489 | WP_054586732.1 | SRPBCC family protein | - |
| AN936_RS02305 () | 475134..475568 | + | 435 | WP_054586733.1 | disulfide bond formation protein B | - |
| AN936_RS02310 () | 475565..476209 | + | 645 | WP_054586734.1 | thioredoxin domain-containing protein | - |
| AN936_RS02315 () | 476399..476704 | + | 306 | WP_149037574.1 | hypothetical protein | - |
| AN936_RS02320 () | 476732..477310 | - | 579 | WP_201782986.1 | class I SAM-dependent methyltransferase | - |
| AN936_RS02325 () | 477439..478128 | - | 690 | WP_054586737.1 | AraC family transcriptional regulator | - |
| AN936_RS02330 () | 478257..480203 | - | 1947 | WP_054586738.1 | cytochrome c/FTR1 family iron permease | - |
| AN936_RS02335 () | 480209..480862 | - | 654 | WP_054586739.1 | cation diffusion facilitator family transporter | - |
| AN936_RS02340 () | 480945..481358 | + | 414 | WP_054586740.1 | helix-turn-helix domain-containing protein | - |
| AN936_RS02345 () | 481461..481664 | - | 204 | WP_054586741.1 | hypothetical protein | - |
| AN936_RS02350 () | 481702..482067 | - | 366 | WP_149037575.1 | hypothetical protein | - |
| AN936_RS02355 () | 482241..482666 | + | 426 | WP_054586743.1 | hypothetical protein | - |
| AN936_RS02360 () | 483083..483328 | + | 246 | WP_054586744.1 | hypothetical protein ; Integrase | Integrase |
| AN936_RS02365 () | 483599..484015 | - | 417 | WP_011542785.1 | hypothetical protein | - |
| AN936_RS02370 () | 484049..485488 | - | 1440 | WP_011542784.1 | mercury(II) reductase | - |
| AN936_RS02375 () | 485499..485780 | - | 282 | WP_041384122.1 | mercury resistance system periplasmic binding protein MerP | - |
| AN936_RS02380 () | 485795..486166 | - | 372 | WP_011542782.1 | mercury transporter MerT | - |
| AN936_RS02385 () | 486241..486696 | + | 456 | WP_011542781.1 | helix-turn-helix domain-containing protein | - |
| AN936_RS02390 () | 487104..488294 | - | 1191 | WP_054586745.1 | IS91 family transposase ISMno24 | Transposase |
| AN936_RS02395 () | 488300..489208 | - | 909 | WP_054586746.1 | IS91 family transposase ISMno24 | Transposase |
| AN936_RS02400 () | 489359..490846 | - | 1488 | WP_054586747.1 | hypothetical protein | - |
| AN936_RS24980 () | 490954..491196 | - | 243 | WP_158500035.1 | energy transducer TonB | - |
| AN936_RS02405 () | 491385..491822 | - | 438 | WP_145985924.1 | hypothetical protein | - |
| AN936_RS02410 () | 492124..492654 | + | 531 | WP_054586749.1 | hypothetical protein | - |
| AN936_RS02415 () | 492913..493200 | - | 288 | WP_054586750.1 | DUF1971 domain-containing protein | - |
| AN936_RS02420 () | 493197..493580 | - | 384 | WP_054590051.1 | group III truncated hemoglobin | - |
| AN936_RS02425 () | 493594..494043 | - | 450 | WP_054586751.1 | hypothetical protein | - |
| AN936_RS02430 () | 494079..494423 | - | 345 | WP_054586752.1 | hypothetical protein | - |
| AN936_RS02435 () | 494452..495141 | - | 690 | WP_054586753.1 | alternative oxidase | - |
| AN936_RS02440 () | 495224..496768 | + | 1545 | WP_054586754.1 | PAS domain-containing sensor histidine kinase | - |
| AN936_RS02445 () | 496758..497378 | + | 621 | WP_054586755.1 | Transcriptional regulatory protein FixJ | VF |
| AN936_RS02450 () | 497451..498443 | - | 993 | WP_120218029.1 | LacI family DNA-binding transcriptional regulator | - |
| AN936_RS02455 () | 498531..500000 | - | 1470 | WP_054586757.1 | MFS transporter | - |
| AN936_RS02460 () | 500130..502253 | + | 2124 | WP_054586758.1 | Pesticin receptor | VF |
| AN936_RS02465 () | 502355..503458 | + | 1104 | WP_054590052.1 | glycoside hydrolase family 68 protein | - |
| AN936_RS02470 () | 503461..504381 | + | 921 | WP_054586759.1 | ROK family protein | - |
| AN936_RS02475 () | 504378..505550 | + | 1173 | WP_054586760.1 | serine hydrolase | - |
| AN936_RS02480 () | 505562..506503 | + | 942 | WP_058814412.1 | Carboxylesterase NlhH | VF |
| AN936_RS02485 () | 506541..508148 | + | 1608 | WP_197715648.1 | long-chain fatty acid--CoA ligase | - |
| AN936_RS02490 () | 508188..509096 | + | 909 | WP_084758128.1 | SGNH/GDSL hydrolase family protein | - |
| AN936_RS02495 () | 509347..510384 | + | 1038 | WP_054586764.1 | IS110 family transposase ISMlo3 | Transposase |
| AN936_RS02500 () | 510738..510929 | - | 192 | WP_054586765.1 | hypothetical protein | - |
| AN936_RS02510 () | 511223..511654 | + | 432 | WP_054586767.1 | hypothetical protein | - |
| AN936_RS02515 () | 511909..512229 | + | 321 | WP_054586768.1 | DUF736 family protein | - |
| AN936_RS25230 () | 512681..512845 | + | 165 | WP_164499240.1 | hypothetical protein | - |
| AN936_RS24985 () | 512969..513106 | + | 138 | WP_158213641.1 | hypothetical protein | - |
| AN936_RS02520 () | 513107..513400 | + | 294 | WP_054586769.1 | hypothetical protein | - |
| AN936_RS02525 () | 513714..514028 | + | 315 | WP_054590053.1 | DUF736 domain-containing protein | - |
| AN936_RS23940 () | 514404..514940 | + | 537 | WP_084758129.1 | DUF2285 domain-containing protein | - |
| AN936_RS02535 () | 515043..515285 | + | 243 | WP_054586770.1 | helix-turn-helix domain-containing protein | - |
| AN936_RS02540 () | 515285..515830 | + | 546 | WP_054586771.1 | DUF2840 domain-containing protein | - |
| AN936_RS02545 () | 515827..516417 | + | 591 | WP_054586772.1 | S26 family signal peptidase | - |
| AN936_RS02550 () | 516414..516740 | + | 327 | WP_054586773.1 | DUF736 domain-containing protein | - |
| AN936_RS02555 () | 516745..517443 | + | 699 | WP_197709687.1 | lytic transglycosylase domain-containing protein | - |
| AN936_RS02560 () | 517663..519408 | + | 1746 | WP_054590056.1 | VirD2 family relaxase/mobilization nuclease | - |
| AN936_RS02565 () | 519424..520812 | + | 1389 | Protein_518 | Conjugal transfer protein TraG | VF |
| AN936_RS02570 () | 521183..521902 | + | 720 | WP_054586774.1 | P-type conjugative transfer protein TrbJ | - |
| AN936_RS02575 () | 521868..522158 | + | 291 | WP_158500036.1 | putative entry exclusion protein TrbK-alt | - |
| AN936_RS02580 () | 522155..523435 | + | 1281 | WP_054586776.1 | P-type conjugative transfer protein TrbL | - |
| AN936_RS02585 () | 523442..524125 | + | 684 | WP_054586777.1 | conjugal transfer protein TrbF | - |
| AN936_RS02590 () | 524122..524973 | + | 852 | WP_084758132.1 | P-type conjugative transfer protein TrbG | - |
| AN936_RS02595 () | 524970..526178 | + | 1209 | WP_054586778.1 | Type IV secretion system protein virB10 | VF |
| AN936_RS02600 () | 526175..526396 | + | 222 | WP_054586779.1 | DUF2274 domain-containing protein | - |
| AN936_RS02605 () | 526510..527892 | - | 1383 | WP_084758133.1 | hypothetical protein ; Integrase | Integrase |
| AN936_RS02610 () | 528025..528750 | - | 726 | WP_054586780.1 | tRNA (guanine(46)-N(7))-methyltransferase TrmB | - |
| AN936_RS02615 () | 528813..529790 | - | 978 | WP_149037577.1 | hypothetical protein | - |
| AN936_RS02620 () | 529858..531078 | - | 1221 | WP_054586782.1 | methionine adenosyltransferase | - |
| AN936_RS02625 () | 531128..532876 | - | 1749 | WP_084758134.1 | apolipoprotein N-acyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|