MGE detailed information
MGE type: Prophage MGE length: 93314 bp
Accession: NZ_CP012693 Location: 3204163..3297476 Organism: Escherichia coli strain FORC_028 Replicon: chromosome
Accession: NZ_CP012693 Location: 3204163..3297476 Organism: Escherichia coli strain FORC_028 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC28_RS16700 () | 3199339..3199986 | + | 648 | WP_001303944.1 | T3SS effector E3 ubiquitin-protein ligase NleG | - |
| FORC28_RS30895 () | 3200123..3200269 | - | 147 | WP_001414184.1 | hypothetical protein | - |
| FORC28_RS16705 () | 3200697..3200975 | + | 279 | WP_001303943.1 | hypothetical protein | - |
| FORC28_RS32345 () | 3201462..3202096 | + | 635 | Protein_3217 | transposase | - |
| FORC28_RS16720 () | 3202143..3202712 | - | 570 | WP_000938103.1 | T3SS effector caspase inhibitor NleF | - |
| FORC28_RS16725 () | 3202778..3203689 | - | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| FORC28_RS33285 () | 3203796..3203918 | - | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| FORC28_RS16730 () | 3203941..3204855 | + | 915 | Protein_3221 | hypothetical protein ; Integrase | Integrase |
| FORC28_RS16735 () | 3205514..3206838 | + | 1325 | Protein_3222 | hypothetical protein | VF |
| FORC28_RS30905 () | 3207178..3207752 | - | 575 | Protein_3223 | hypothetical protein | VF |
| FORC28_RS16740 () | 3207865..3208134 | - | 270 | WP_001023357.1 | phage tail fiber C-terminal domain-containing protein | - |
| FORC28_RS16745 () | 3208195..3208872 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| FORC28_RS16750 () | 3208872..3209219 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FORC28_RS16755 () | 3209239..3210810 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| FORC28_RS16760 () | 3210843..3212156 | - | 1314 | WP_000216552.1 | ISNCY family transposase KIS | Transposase |
| FORC28_RS16765 () | 3212308..3212907 | - | 600 | WP_001228278.1 | hypothetical protein | VF |
| FORC28_RS16770 () | 3212975..3214024 | - | 1050 | WP_000902073.1 | DUF1983 domain-containing protein | - |
| FORC28_RS16775 () | 3214047..3215585 | - | 1539 | WP_000099160.1 | IS66 family transposase ISEc22 | Transposase |
| FORC28_RS16780 () | 3215634..3215981 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| FORC28_RS16785 () | 3215978..3216382 | - | 405 | WP_000839170.1 | IS66 family transposase ISEc22 | Transposase |
| FORC28_RS16790 () | 3216466..3218910 | - | 2445 | Protein_3234 | host specificity protein J | - |
| FORC28_RS16795 () | 3219253..3219885 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| FORC28_RS16800 () | 3219831..3220574 | - | 744 | WP_000194723.1 | C40 family peptidase | - |
| FORC28_RS16805 () | 3220585..3221283 | - | 699 | WP_001335877.1 | phage minor tail protein L | - |
| FORC28_RS16810 () | 3221283..3221624 | - | 342 | WP_000807940.1 | phage tail protein | - |
| FORC28_RS16815 () | 3221617..3224859 | - | 3243 | WP_000212980.1 | phage tail tape measure protein | - |
| FORC28_RS16820 () | 3224907..3225116 | - | 210 | WP_001513217.1 | DUF4035 domain-containing protein | - |
| FORC28_RS16825 () | 3225212..3225586 | - | 375 | WP_000710949.1 | phage tail assembly chaperone | - |
| FORC28_RS16830 () | 3225601..3226317 | - | 717 | WP_001275441.1 | immunoglobulin domain-containing protein | - |
| FORC28_RS16835 () | 3226384..3226728 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| FORC28_RS16840 () | 3226725..3227171 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| FORC28_RS16845 () | 3227168..3227518 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| FORC28_RS16850 () | 3227528..3227854 | - | 327 | WP_000125990.1 | head-tail connector protein | - |
| FORC28_RS16855 () | 3227857..3230436 | - | 2580 | WP_000267296.1 | phage portal protein | - |
| FORC28_RS16860 () | 3230382..3230603 | - | 222 | WP_001063099.1 | hypothetical protein | - |
| FORC28_RS16865 () | 3230648..3232426 | - | 1779 | WP_062854036.1 | phage major capsid protein | - |
| FORC28_RS16870 () | 3232490..3234151 | - | 1662 | WP_033800465.1 | terminase large subunit | - |
| FORC28_RS16875 () | 3234148..3234711 | - | 564 | WP_044162959.1 | terminase small subunit | - |
| FORC28_RS16880 () | 3235003..3235368 | - | 366 | WP_000279801.1 | HNH endonuclease | - |
| FORC28_RS16885 () | 3235410..3235610 | + | 201 | WP_000095732.1 | DUF3950 domain-containing protein | - |
| FORC28_RS16890 () | 3235742..3236068 | - | 327 | WP_000828072.1 | TonB family protein | - |
| FORC28_RS33290 () | 3236469..3236654 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| FORC28_RS16900 () | 3236876..3236962 | - | 87 | WP_032140280.1 | hypothetical protein | - |
| FORC28_RS16915 () | 3237517..3238050 | - | 534 | WP_000992033.1 | lysozyme | - |
| FORC28_RS16920 () | 3238101..3238445 | - | 345 | WP_021569237.1 | YdfR family protein | - |
| FORC28_RS16925 () | 3238450..3238665 | - | 216 | WP_000284518.1 | class II holin family protein | - |
| FORC28_RS16930 () | 3238815..3240668 | - | 1854 | WP_069358388.1 | SASA family carbohydrate esterase | - |
| FORC28_RS16935 () | 3240928..3241263 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| FORC28_RS33295 () | 3241544..3241675 | - | 132 | WP_001340026.1 | DUF3927 family protein | - |
| FORC28_RS16965 () | 3242474..3243523 | - | 1050 | WP_000611215.1 | site-specific DNA-methyltransferase | - |
| FORC28_RS33300 () | 3243674..3243871 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| FORC28_RS16975 () | 3244103..3244645 | - | 543 | WP_000640017.1 | DUF1133 family protein | - |
| FORC28_RS16980 () | 3244654..3245019 | - | 366 | WP_000140024.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FORC28_RS16985 () | 3245020..3246075 | - | 1056 | WP_001369253.1 | DUF968 domain-containing protein | - |
| FORC28_RS30925 () | 3246077..3246349 | - | 273 | WP_012817871.1 | hypothetical protein | - |
| FORC28_RS16995 () | 3246517..3246672 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FORC28_RS17000 () | 3246745..3247032 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FORC28_RS17005 () | 3247032..3247271 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FORC28_RS30930 () | 3247296..3247601 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| FORC28_RS17010 () | 3247804..3248136 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| FORC28_RS17015 () | 3248573..3249913 | - | 1341 | WP_000589012.1 | ISNCY family transposase ISCARN112 | Transposase |
| FORC28_RS17020 () | 3249947..3250366 | - | 420 | WP_001151195.1 | DUF977 family protein | - |
| FORC28_RS17025 () | 3250407..3251372 | - | 966 | WP_000054507.1 | hypothetical protein | - |
| FORC28_RS17030 () | 3251353..3251874 | - | 522 | WP_000705349.1 | hypothetical protein | - |
| FORC28_RS17035 () | 3251858..3252085 | - | 228 | WP_000476993.1 | transcriptional regulator | - |
| FORC28_RS17040 () | 3252163..3252570 | + | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| FORC28_RS17045 () | 3252763..3252918 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| FORC28_RS17050 () | 3252920..3253495 | + | 576 | WP_000347171.1 | hypothetical protein | - |
| FORC28_RS17055 () | 3253982..3254170 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FORC28_RS17060 () | 3254167..3254358 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| FORC28_RS17065 () | 3254452..3256923 | + | 2472 | WP_000048369.1 | exonuclease | - |
| FORC28_RS30940 () | 3256996..3257088 | + | 93 | Protein_3285 | excisionase family protein | - |
| FORC28_RS17070 () | 3257119..3258690 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| FORC28_RS17075 () | 3258710..3259057 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FORC28_RS17080 () | 3259057..3259734 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| FORC28_RS17085 () | 3259724..3259954 | + | 231 | Protein_3289 | excisionase family protein | - |
| FORC28_RS17090 () | 3259989..3261269 | + | 1281 | WP_000877011.1 | hypothetical protein ; Integrase | Integrase |
| FORC28_RS32355 () | 3261289..3261399 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| FORC28_RS17095 () | 3261457..3262476 | - | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| FORC28_RS17100 () | 3262488..3263702 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FORC28_RS17105 () | 3263908..3264234 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| FORC28_RS17110 () | 3264369..3264710 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| FORC28_RS17115 () | 3264745..3265305 | + | 561 | WP_001138576.1 | spermidine N1-acetyltransferase | - |
| FORC28_RS17120 () | 3265308..3266018 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| FORC28_RS17125 () | 3266126..3266431 | + | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| FORC28_RS17130 () | 3266630..3269055 | + | 2426 | Protein_3299 | dimethyl sulfoxide reductase subunit A | - |
| FORC28_RS17135 () | 3269116..3271539 | + | 2424 | WP_077886428.1 | dimethyl sulfoxide reductase subunit A | - |
| FORC28_RS17140 () | 3271550..3272167 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| FORC28_RS17145 () | 3272169..3273023 | + | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit | - |
| FORC28_RS17150 () | 3273066..3273680 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| FORC28_RS17155 () | 3273839..3275131 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| FORC28_RS17160 () | 3275084..3275779 | - | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| FORC28_RS17165 () | 3275904..3277124 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| FORC28_RS17170 () | 3277259..3278152 | - | 894 | WP_001019545.1 | hypothetical protein | VF |
| FORC28_RS17175 () | 3278259..3279512 | + | 1254 | WP_000091840.1 | MFS transporter | - |
| FORC28_RS33955 () | 3279561..3279680 | - | 120 | WP_001299090.1 | hypothetical protein | - |
| FORC28_RS17180 () | 3279936..3280244 | + | 309 | WP_001342195.1 | acid resistance repetitive basic protein Asr | - |
| FORC28_RS17185 () | 3280337..3280420 | + | 84 | WP_000233090.1 | hypothetical protein | - |
| FORC28_RS17190 () | 3280520..3281341 | + | 822 | WP_001260840.1 | serine protease | - |
| FORC28_RS17195 () | 3281380..3281709 | - | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| FORC28_RS17200 () | 3281696..3282061 | - | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| FORC28_RS33960 () | 3282168..3282269 | - | 102 | WP_211180498.1 | protein YdgV | - |
| FORC28_RS33775 () | 3282473..3282616 | + | 144 | Protein_3316 | pheromone autoinducer 2 transporter | - |
| FORC28_RS17205 () | 3283375..3283656 | - | 282 | WP_000133423.1 | hypothetical protein | - |
| FORC28_RS17210 () | 3283670..3285331 | - | 1662 | WP_000127880.1 | terminase large subunit | - |
| FORC28_RS17215 () | 3285315..3285671 | - | 357 | WP_000113645.1 | phage terminase small subunit P27 family | - |
| FORC28_RS17220 () | 3285795..3285977 | - | 183 | WP_024166058.1 | hypothetical protein | - |
| FORC28_RS17225 () | 3285961..3286401 | - | 441 | WP_001145909.1 | HNH endonuclease | - |
| FORC28_RS17230 () | 3286401..3286697 | - | 297 | WP_000134111.1 | head-tail connector protein | - |
| FORC28_RS17235 () | 3286694..3287032 | - | 339 | WP_016241300.1 | phage head closure protein | - |
| FORC28_RS17240 () | 3287029..3288240 | - | 1212 | WP_024196038.1 | phage portal protein | - |
| FORC28_RS17245 () | 3288242..3288799 | - | 558 | WP_016241302.1 | HK97 family phage prohead protease | - |
| FORC28_RS17250 () | 3288855..3290012 | - | 1158 | WP_016241303.1 | phage major capsid protein | - |
| FORC28_RS17255 () | 3290305..3290529 | - | 225 | WP_016241304.1 | hypothetical protein | - |
| FORC28_RS17260 () | 3290655..3290927 | - | 273 | WP_016241305.1 | PerC family transcriptional regulator | - |
| FORC28_RS17265 () | 3290938..3291348 | - | 411 | WP_016241306.1 | single-stranded DNA-binding protein | - |
| FORC28_RS32360 () | 3291358..3291663 | - | 306 | WP_001294165.1 | hypothetical protein | - |
| FORC28_RS17275 () | 3291660..3291905 | - | 246 | WP_001475690.1 | hypothetical protein | - |
| FORC28_RS17280 () | 3292193..3294010 | - | 1818 | WP_016241307.1 | hypothetical protein | - |
| FORC28_RS17285 () | 3294007..3294306 | - | 300 | WP_001261503.1 | DUF4222 domain-containing protein | - |
| FORC28_RS17290 () | 3294313..3294633 | - | 321 | WP_016241308.1 | hypothetical protein | - |
| FORC28_RS30970 () | 3294626..3295648 | - | 1023 | WP_071961445.1 | host cell division inhibitor Icd-like protein | - |
| FORC28_RS30975 () | 3295706..3295894 | - | 189 | WP_001443601.1 | AlpA family transcriptional regulator | - |
| FORC28_RS17310 () | 3296259..3297488 | - | 1230 | WP_000085272.1 | hypothetical protein ; Integrase | Integrase |
| FORC28_RS17315 () | 3297665..3298570 | + | 906 | Protein_3338 | AI-2 transporter TqsA | - |
| FORC28_RS17320 () | 3298595..3299983 | - | 1389 | WP_000014036.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | - |
| FORC28_RS17325 () | 3299994..3301526 | - | 1533 | WP_001295398.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|