MGE detailed information
MGE type: Prophage MGE length: 58690 bp
Accession: NZ_CP012693 Location: 2280801..2339490 Organism: Escherichia coli strain FORC_028 Replicon: chromosome
Accession: NZ_CP012693 Location: 2280801..2339490 Organism: Escherichia coli strain FORC_028 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC28_RS11470 () | 2276260..2277099 | + | 840 | WP_001342239.1 | alpha/beta hydrolase | - |
| FORC28_RS11475 () | 2277122..2277964 | + | 843 | WP_000546440.1 | Nif3-like dinuclear metal center hexameric protein | - |
| FORC28_RS11480 () | 2278024..2279466 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| FORC28_RS11485 () | 2279594..2280463 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| FORC28_RS11495 () | 2280801..2282276 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| FORC28_RS11500 () | 2282511..2284322 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| FORC28_RS11505 () | 2284359..2285000 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| FORC28_RS11510 () | 2285056..2286234 | - | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| FORC28_RS11515 () | 2286368..2286658 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| FORC28_RS11520 () | 2286725..2287081 | + | 357 | WP_001295500.1 | protein YebF | - |
| FORC28_RS11530 () | 2287408..2288067 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| FORC28_RS11535 () | 2288276..2290336 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| FORC28_RS11540 () | 2290333..2290995 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| FORC28_RS11545 () | 2291019..2291675 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| FORC28_RS11550 () | 2291777..2292007 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| FORC28_RS11555 () | 2292146..2292520 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| FORC28_RS11560 () | 2292524..2293396 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| FORC28_RS11565 () | 2293409..2293750 | + | 342 | WP_000976492.1 | YebY family protein | - |
| FORC28_RS11575 () | 2294143..2295219 | - | 1077 | WP_001189091.1 | hypothetical protein ; Integrase | Integrase |
| FORC28_RS30360 () | 2295185..2295466 | - | 282 | WP_001443927.1 | excisionase | - |
| FORC28_RS11580 () | 2295573..2295761 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2295577..2295755 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2295577..2295755 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2295577..2295755 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2295577..2295755 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| FORC28_RS11585 () | 2295754..2295948 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| FORC28_RS11590 () | 2296005..2296814 | - | 810 | WP_000166317.1 | recombination protein RecT | - |
| FORC28_RS11595 () | 2296807..2299458 | - | 2652 | WP_000105101.1 | exodeoxyribonuclease VIII | - |
| FORC28_RS11600 () | 2299557..2299832 | - | 276 | WP_001307773.1 | hypothetical protein | - |
| FORC28_RS11605 () | 2299906..2300082 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| FORC28_RS11610 () | 2300076..2300297 | - | 222 | WP_000560218.1 | killing protein KilR | - |
| FORC28_RS11615 () | 2300718..2300870 | - | 153 | WP_001427316.1 | DUF1391 family protein | - |
| FORC28_RS11620 () | 2301157..2301435 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FORC28_RS11625 () | 2301437..2301628 | - | 192 | WP_001302048.1 | hypothetical protein | - |
| FORC28_RS32160 () | 2301649..2302020 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| FORC28_RS11635 () | 2302118..2302420 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| FORC28_RS11640 () | 2302417..2302842 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| FORC28_RS11645 () | 2302865..2303827 | + | 963 | WP_077886425.1 | helix-turn-helix domain-containing protein | - |
| FORC28_RS11650 () | 2303834..2304575 | + | 742 | Protein_2235 | ATP-binding protein | - |
| FORC28_RS11655 () | 2304601..2305362 | + | 762 | WP_000450872.1 | DUF1627 domain-containing protein | - |
| FORC28_RS11660 () | 2305395..2305676 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| FORC28_RS11665 () | 2305673..2305900 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| FORC28_RS11670 () | 2305893..2306204 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| FORC28_RS11675 () | 2306332..2306550 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| FORC28_RS11680 () | 2306552..2307109 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| FORC28_RS11685 () | 2307400..2307555 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| FORC28_RS11690 () | 2307675..2308019 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| FORC28_RS11695 () | 2308141..2308413 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| FORC28_RS11700 () | 2308415..2309464 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| FORC28_RS11705 () | 2309477..2309851 | + | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FORC28_RS11710 () | 2309848..2310669 | + | 822 | WP_000762928.1 | antitermination protein | - |
| FORC28_RS30365 () | 2310907..2311269 | + | 363 | Protein_2248 | tellurite resistance TerB family protein | - |
| FORC28_RS11725 () | 2311266..2311518 | + | 253 | Protein_2249 | DUF3927 family protein | - |
| FORC28_RS11730 () | 2311840..2313690 | + | 1851 | WP_000143049.1 | SASA family carbohydrate esterase | - |
| FORC28_RS11740 () | 2314129..2314344 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| FORC28_RS11745 () | 2314344..2314841 | + | 498 | WP_000075132.1 | lysozyme RrrD | - |
| FORC28_RS11750 () | 2314838..2315275 | + | 438 | WP_000092325.1 | lysis protein | - |
| FORC28_RS33715 () | 2315425..2315577 | + | 153 | WP_001448382.1 | hypothetical protein | - |
| FORC28_RS11765 () | 2316848..2317309 | + | 462 | WP_074432125.1 | Rha family transcriptional regulator | - |
| FORC28_RS11775 () | 2317497..2317691 | - | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| FORC28_RS11780 () | 2318080..2318625 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| FORC28_RS11785 () | 2318600..2320525 | + | 1926 | Protein_2259 | phage terminase large subunit family protein | - |
| FORC28_RS11790 () | 2320522..2320728 | + | 207 | WP_000198153.1 | gpW family protein | - |
| FORC28_RS11795 () | 2320725..2322326 | + | 1602 | WP_001443752.1 | phage portal protein | - |
| FORC28_RS11800 () | 2322307..2323626 | + | 1320 | WP_000123251.1 | S49 family peptidase | - |
| FORC28_RS11805 () | 2323636..2323968 | + | 333 | WP_001365129.1 | head decoration protein | - |
| FORC28_RS11810 () | 2324024..2325049 | + | 1026 | WP_000063258.1 | major capsid protein | - |
| FORC28_RS11815 () | 2325091..2325486 | + | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| FORC28_RS11820 () | 2325498..2325851 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| FORC28_RS11825 () | 2325863..2326441 | + | 579 | WP_000975098.1 | phage tail protein | - |
| FORC28_RS11830 () | 2326438..2326833 | + | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| FORC28_RS11835 () | 2326841..2327593 | + | 753 | WP_000235067.1 | Ig domain-containing protein | - |
| FORC28_RS11840 () | 2327607..2328029 | + | 423 | WP_000479051.1 | phage minor tail protein G | - |
| FORC28_RS11845 () | 2328056..2328469 | + | 414 | WP_000533442.1 | phage tail assembly protein T | - |
| FORC28_RS11850 () | 2328450..2331062 | + | 2613 | WP_000081791.1 | phage tail tape measure protein | - |
| FORC28_RS11855 () | 2331059..2331388 | + | 330 | WP_000847298.1 | phage tail protein | - |
| FORC28_RS11860 () | 2331388..2332086 | + | 699 | WP_001448322.1 | phage minor tail protein L | - |
| FORC28_RS11865 () | 2332097..2332840 | + | 744 | WP_069358375.1 | C40 family peptidase | - |
| FORC28_RS11870 () | 2332786..2333418 | + | 633 | WP_096844540.1 | tail assembly protein | - |
| FORC28_RS11875 () | 2333664..2337140 | + | 3477 | WP_069358376.1 | host specificity protein J | - |
| FORC28_RS11880 () | 2337209..2337832 | + | 624 | WP_001216290.1 | hypothetical protein | VF |
| FORC28_RS11885 () | 2337897..2339219 | + | 1323 | WP_069358377.1 | ISNCY family transposase KIS | Transposase |
| FORC28_RS11890 () | 2339221..2339490 | + | 270 | WP_001023445.1 | phage tail fiber C-terminal domain-containing protein | - |
| FORC28_RS30370 () | 2339615..2340367 | - | 753 | WP_012817749.1 | type III effector | - |
| FORC28_RS11910 () | 2341484..2342602 | + | 1119 | WP_001058323.1 | hydrogenase 1 small subunit | - |
| FORC28_RS11915 () | 2342599..2344392 | + | 1794 | WP_000107384.1 | Ni/Fe-hydrogenase large subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|