NZ_CP0126681..180116

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 180116 bp
Accession: NZ_CP012668        Location: 1..180116         Organism: Vibrio cholerae strain ICDC-VC661       Replicon: plasmid unnamed


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AN947_RS19550 () 47..751 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AN947_RS19560 () 934..1749 - 816 WP_000018326.1 Aminoglycoside 3'-phosphotransferase ARG
AN947_RS19570 () 1868..2571 - 704 Protein_2 IS6 family transposase IS26 Transposase
AN947_RS19575 () 2635..3161 + 527 Protein_3 DUF3883 domain-containing protein -
AN947_RS19580 () 3276..4646 + 1371 WP_000971921.1 IS1182 family transposase ISCfr1 Transposase
AN947_RS19590 () 5470..6330 + 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
AN947_RS19595 () 6343..6885 + 543 WP_000587837.1 AAA family ATPase -
AN947_RS19600 () 7367..7558 - 192 WP_000951934.1 hypothetical protein -
AN947_RS19605 () 7582..7809 + 228 WP_000248278.1 hypothetical protein -
AN947_RS19610 () 7860..8477 + 618 Protein_9 hypothetical protein -
AN947_RS19615 () 8529..9233 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AN947_RS19620 () 9313..9813 + 501 WP_001239317.1 hypothetical protein -
AN947_RS19625 () 9963..10604 + 642 WP_001011939.1 Chloramphenicol acetyltransferase 2 ARG
AN947_RS19635 () 10748..11452 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AN947_RS19640 () 11464..12120 - 657 WP_000113282.1 Tetracycline repressor protein class D VF
AN947_RS19645 () 12216..13400 + 1185 WP_001039466.1 Tetracycline resistance protein, class B ARG
AN947_RS19650 () 13495..14604 + 1110 WP_000842134.1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase -
AN947_RS19655 () 14626..15042 + 417 Protein_17 S-formylglutathione hydrolase -
AN947_RS19660 () 15094..15799 - 706 Protein_18 IS6 family transposase IS26 Transposase
AN947_RS19665 () 15864..16043 - 180 Protein_19 helix-turn-helix transcriptional regulator -
AN947_RS19670 () 16350..17054 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AN947_RS19680 () 17504..18979 + 1476 WP_000052512.1 putative ABC transporter ATP-binding protein YbiT ARG
AN947_RS19685 () 19035..19919 + 885 WP_000155092.1 hypothetical protein ARG
AN947_RS19690 () 20278..20820 - 543 WP_004896925.1 plasmid replication DNA-binding protein -
AN947_RS19695 () 20887..21639 - 753 Protein_24 RepB family plasmid replication initiator protein -
AN947_RS19700 () 21705..22409 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AN947_RS19705 () 22462..23259 - 798 Protein_26 IS91 family transposase ISAzo26 Transposase
AN947_RS19710 () 23405..24196 + 792 WP_001206356.1 Streptomycin 3''-adenylyltransferase ARG
AN947_RS19715 () 24360..24707 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
AN947_RS19720 () 24701..25540 + 840 WP_000259031.1 Dihydropteroate synthase ARG
AN947_RS19725 () 25945..27486 + 1542 WP_000050481.1 IS91 family transposase ISVsa3 Transposase
AN947_RS19730 () 27780..28256 + 477 WP_096068429.1 dihydrofolate reductase -
AN947_RS19735 () 28292..28612 - 321 Protein_32 RepB family plasmid replication initiator protein -
AN947_RS19745 () 28678..29382 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AN947_RS20880 () 29388..29528 + 141 WP_001044210.1 hypothetical protein -
AN947_RS19755 () 30014..30751 + 738 WP_001366550.1 Tn3 family transposase TnpR_TnEc1 Transposase
AN947_RS19760 () 30748..30972 + 225 WP_000743213.1 hypothetical protein -
AN947_RS19765 () 31183..31587 + 405 Protein_37 IS91 family transposase ISPps1 Transposase
AN947_RS19770 () 31694..32530 - 837 WP_000480968.1 hypothetical protein ARG
AN947_RS19775 () 32530..33333 - 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
AN947_RS19780 () 33394..34209 - 816 WP_001043260.1 Dihydropteroate synthase ARG
AN947_RS19790 () 34680..37658 + 2979 WP_000985631.1 Tn3 family transposase TnpA_ISShfr9 Transposase
AN947_RS19800 () 38076..39569 + 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
AN947_RS20885 () 40038..40484 + 447 Protein_43 DUF3363 domain-containing protein -
AN947_RS19810 () 40701..41915 + 1215 WP_000214116.1 Inner membrane transport protein YdhC ARG
AN947_RS19815 () 41943..42248 + 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF
AN947_RS19820 () 42360..43853 + 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
AN947_RS19830 () 44089..44331 - 243 Protein_47 phosphoglucosamine mutase -
AN947_RS19835 () 44418..45233 - 816 WP_001043260.1 Dihydropteroate synthase ARG
AN947_RS19845 () 45540..45851 + 312 WP_000338945.1 hypothetical protein -
AN947_RS19850 () 46025..46810 + 786 WP_001151304.1 Sporulation initiation inhibitor protein Soj VF
AN947_RS19855 () 46814..47995 + 1182 WP_001207227.1 ParB/RepB/Spo0J family partition protein -
AN947_RS19860 () 48044..48316 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
AN947_RS19865 () 48369..49004 - 636 WP_000074431.1 N-6 DNA methylase -
AN947_RS20890 () 49096..49239 - 144 WP_000939033.1 hypothetical protein -
AN947_RS19870 () 49558..49935 + 378 WP_001125905.1 hypothetical protein -
AN947_RS19875 () 49928..50209 + 282 WP_000044824.1 hypothetical protein -
AN947_RS19880 () 50184..50858 + 675 WP_000344151.1 thymidylate kinase -
AN947_RS19885 () 50926..51357 + 432 WP_005507681.1 hypothetical protein -
AN947_RS19890 () 51363..51674 + 312 WP_002210541.1 hypothetical protein -
AN947_RS19895 () 51683..52183 + 501 WP_000647189.1 hypothetical protein -
AN947_RS19900 () 52187..53614 + 1428 WP_000936896.1 DNA cytosine methyltransferase -
AN947_RS19905 () 53614..54270 + 657 WP_000268551.1 hypothetical protein -
AN947_RS19915 () 54476..54694 + 219 WP_000362482.1 hypothetical protein -
AN947_RS19920 () 54788..55405 + 618 WP_000464631.1 hypothetical protein -
AN947_RS19930 () 55617..55916 + 300 WP_000542259.1 hypothetical protein -
AN947_RS19935 () 56008..56496 - 489 WP_000468105.1 hypothetical protein -
AN947_RS19940 () 56511..58703 - 2193 WP_000366822.1 DNA topoisomerase 3 -
AN947_RS19945 () 58703..58936 - 234 WP_001191892.1 hypothetical protein -
AN947_RS19950 () 58918..59535 - 618 WP_001249396.1 hypothetical protein -
AN947_RS19955 () 59703..62681 + 2979 WP_001337757.1 hypothetical protein Relaxase
AN947_RS19960 () 62678..64543 + 1866 WP_000178856.1 conjugative transfer system coupling protein TraD -
AN947_RS19965 () 64554..65138 + 585 WP_000332866.1 hypothetical protein -
AN947_RS19970 () 65095..65724 + 630 WP_000743450.1 DUF4400 domain-containing protein -
AN947_RS19975 () 65734..66180 + 447 WP_000122506.1 hypothetical protein -
AN947_RS19980 () 66190..66567 + 378 WP_000869261.1 hypothetical protein -
AN947_RS19985 () 66567..67229 + 663 WP_001231463.1 hypothetical protein -
AN947_RS20895 () 67410..67553 + 144 WP_001275801.1 hypothetical protein -
AN947_RS19990 () 67553..67930 + 378 WP_000509509.1 hypothetical protein -
AN947_RS19995 () 68075..68356 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
AN947_RS20000 () 68353..68979 + 627 WP_001049716.1 hypothetical protein -
AN947_RS20005 () 68963..69880 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
AN947_RS20010 () 69880..71193 + 1314 WP_024131605.1 conjugal transfer protein TraB -
AN947_RS20015 () 71190..71768 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
AN947_RS20020 () 71772..72163 + 392 Protein_84 conjugal transfer protein TraA -
AN947_RS20025 () 72364..77895 + 5532 WP_000606833.1 DUF4165 domain-containing protein -
AN947_RS20030 () 78044..78751 + 708 WP_001259347.1 DsbC family protein -
AN947_RS20035 () 78748..81195 + 2448 WP_000637386.1 type IV secretion system protein TraC -
AN947_RS20040 () 81210..81527 + 318 WP_000351984.1 hypothetical protein -
AN947_RS20045 () 81524..82054 + 531 WP_001010738.1 S26 family signal peptidase -
AN947_RS20050 () 82017..83282 + 1266 WP_000621288.1 conjugal transfer protein TraW -
AN947_RS20055 () 83279..83950 + 672 WP_001337754.1 EAL domain-containing protein -
AN947_RS20060 () 83947..84954 + 1008 WP_000983283.1 TraU family protein -
AN947_RS20065 () 85058..87868 + 2811 WP_001909286.1 conjugal transfer mating pair stabilization protein TraN -
AN947_RS20070 () 87907..88767 - 861 WP_000709517.1 hypothetical protein -
AN947_RS20075 () 88890..89531 - 642 WP_000796664.1 hypothetical protein -
AN947_RS20080 () 89825..90145 + 321 WP_000547566.1 hypothetical protein -
AN947_RS20085 () 90449..90634 + 186 WP_001186917.1 hypothetical protein -
AN947_RS20090 () 90854..91822 + 969 WP_000085162.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
AN947_RS20095 () 91833..92741 + 909 WP_000739139.1 hypothetical protein -
AN947_RS20100 () 92802..93332 + 531 WP_000987165.1 single-stranded DNA-binding protein -
AN947_RS20105 () 93427..94416 + 990 WP_096068430.1 phage recombination protein Bet -
AN947_RS20110 () 94479..95489 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
AN947_RS20115 () 95689..96966 + 1278 WP_000170086.1 DUF3150 domain-containing protein -
AN947_RS20120 () 97051..98847 + 1797 WP_000039318.1 VWA domain-containing protein -
AN947_RS20125 () 98909..99244 + 336 WP_001071288.1 hypothetical protein -
AN947_RS20130 () 99509..100048 + 540 WP_000018872.1 hypothetical protein -
AN947_RS20135 () 100139..100639 + 501 WP_000793769.1 hypothetical protein -
AN947_RS20140 () 100713..101597 + 885 WP_000477209.1 hypothetical protein -
AN947_RS20145 () 101663..101887 + 225 WP_001102700.1 2Fe-2S ferredoxin-like protein -
AN947_RS20150 () 101949..102338 + 390 WP_000026577.1 hypothetical protein -
AN947_RS20155 () 102328..102780 + 453 WP_001176699.1 hypothetical protein -
AN947_RS20160 () 102761..103060 + 300 WP_000164429.1 hypothetical protein -
AN947_RS20165 () 103118..103309 + 192 WP_000651508.1 hypothetical protein -
AN947_RS20170 () 103354..103731 + 378 WP_001337696.1 hypothetical protein -
AN947_RS20180 () 103923..104267 + 345 WP_000209093.1 hypothetical protein -
AN947_RS20185 () 104345..104647 + 303 WP_000410925.1 hypothetical protein -
AN947_RS20190 () 104725..106350 + 1626 WP_000201432.1 DNA cytosine methyltransferase -
AN947_RS20195 () 106411..106842 + 432 WP_000687894.1 hypothetical protein -
AN947_RS20200 () 106916..107470 + 555 WP_001093868.1 hypothetical protein -
AN947_RS20205 () 107703..108089 + 387 WP_000042274.1 hypothetical protein -
AN947_RS20210 () 108177..110630 + 2454 WP_001187970.1 phosphoadenosine phosphosulfate reductase -
AN947_RS20215 () 110832..111035 + 204 WP_000050848.1 hypothetical protein -
AN947_RS20220 () 111107..111712 + 606 WP_000071870.1 5'-deoxynucleotidase -
AN947_RS20225 () 111705..111974 + 270 WP_000184110.1 hypothetical protein -
AN947_RS20230 () 111988..112206 + 219 WP_000260293.1 hypothetical protein -
AN947_RS20235 () 112280..112838 + 559 Protein_126 pyruvate dehydrogenase -
AN947_RS20240 () 112913..113764 + 852 WP_000595210.1 hypothetical protein -
AN947_RS20900 () 113969..114115 + 147 WP_001032042.1 hypothetical protein -
AN947_RS20245 () 114222..114608 + 387 WP_001077335.1 hypothetical protein -
AN947_RS20250 () 114786..116513 + 1728 WP_000122923.1 toprim domain-containing protein -
AN947_RS20255 () 116500..116778 + 279 WP_000268337.1 hypothetical protein -
AN947_RS20260 () 116851..117090 + 240 WP_000714162.1 permease -
AN947_RS20905 () 117100..117216 + 117 WP_000338626.1 hypothetical protein -
AN947_RS20265 () 117337..117711 + 375 WP_000868821.1 hypothetical protein -
AN947_RS20270 () 117825..118550 + 726 WP_000988732.1 hypothetical protein -
AN947_RS20280 () 118791..122945 + 4155 WP_014342219.1 Putative deoxyribonuclease RhsC VF
AN947_RS20285 () 122942..123214 + 273 WP_000787563.1 MafI family immunity protein -
AN947_RS20290 () 123219..123461 + 243 WP_000750746.1 hypothetical protein -
AN947_RS20295 () 123509..123808 + 300 WP_011872911.1 hypothetical protein -
AN947_RS20300 () 123975..124427 + 453 WP_000791469.1 hypothetical protein -
AN947_RS20305 () 124443..125045 - 603 WP_000278322.1 hypothetical protein -
AN947_RS20310 () 125307..125588 + 282 WP_000575657.1 hypothetical protein -
AN947_RS20320 () 125887..126423 + 537 WP_096068431.1 hypothetical protein -
AN947_RS20325 () 126426..127436 + 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
AN947_RS20330 () 127441..128310 + 870 WP_000997323.1 3'-5' exonuclease -
AN947_RS20335 () 128307..128798 + 492 WP_000139717.1 hypothetical protein -
AN947_RS20340 () 129125..130000 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
AN947_RS20345 () 130162..131201 + 1040 Protein_148 DNA-binding protein -
AN947_RS20355 () 131488..132783 + 1296 Protein_149 UvrD-helicase domain-containing protein -
AN947_RS20360 () 132930..133790 - 861 WP_000027057.1 Beta-lactamase TEM ARG
AN947_RS20365 () 133973..134530 - 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
AN947_RS20370 () 134694..137699 + 3006 WP_096068432.1 Tn3 family transposase TnpA_Tn3 Transposase
AN947_RS20375 () 137733..137954 + 222 Protein_153 DNA helicase -
AN947_RS20380 () 138065..139105 + 1041 WP_001326396.1 conjugal transfer protein TraF -
AN947_RS20385 () 139107..140540 + 1434 WP_000256129.1 conjugal transfer protein TraH -
AN947_RS20390 () 140553..144167 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
AN947_RS20395 () 144205..144567 - 363 WP_000683483.1 hypothetical protein -
AN947_RS20400 () 145283..145555 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
AN947_RS20405 () 145555..146088 + 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
AN947_RS20410 () 146099..146707 + 609 WP_000891157.1 hypothetical protein -
AN947_RS20415 () 146704..147255 + 552 WP_001020646.1 hypothetical protein -
AN947_RS20420 () 147315..147735 - 421 Protein_162 H-NS histone family protein -
AN947_RS20425 () 147737..148030 - 294 WP_000919078.1 hypothetical protein -
AN947_RS20430 () 148047..149030 - 984 WP_000077458.1 ParM/StbA family protein -
AN947_RS20435 () 149529..150068 + 540 WP_001447712.1 hypothetical protein -
AN947_RS20440 () 150073..150360 + 288 WP_000127321.1 hypothetical protein -
AN947_RS20445 () 150345..151445 + 1101 WP_000350011.1 plasmid replication protein -
AN947_RS20460 () 152482..152916 - 435 WP_000883925.1 hypothetical protein -
AN947_RS20465 () 152934..154049 - 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
AN947_RS20470 () 154318..154926 + 609 WP_000849071.1 hypothetical protein -
AN947_RS20475 () 154931..155452 + 522 WP_000393785.1 hypothetical protein -
AN947_RS20480 () 155455..155976 + 522 WP_000805800.1 hypothetical protein -
AN947_RS20485 () 156073..156546 + 474 WP_000057877.1 hypothetical protein -
AN947_RS20490 () 156557..156850 + 294 WP_001370730.1 hypothetical protein -
AN947_RS20495 () 156855..157709 + 855 WP_000539392.1 hypothetical protein -
AN947_RS20500 () 157709..158668 + 960 WP_000829616.1 S49 family peptidase -
AN947_RS20505 () 158764..159543 + 780 WP_163566378.1 DsbA family protein -
AN947_RS20510 () 159577..160005 + 429 WP_000591074.1 hypothetical protein -
AN947_RS20515 () 160062..160421 + 360 WP_000422768.1 hypothetical protein -
AN947_RS20520 () 160421..160867 + 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
AN947_RS20525 () 160864..161382 + 519 WP_000210756.1 nitrite reductase -
AN947_RS20530 () 161382..161612 + 231 WP_000972663.1 hypothetical protein -
AN947_RS20535 () 161599..162457 + 859 Protein_183 hypothetical protein -
AN947_RS20545 () 162688..163215 + 528 WP_001236377.1 thermonuclease family protein -
AN947_RS20550 () 163273..163545 + 273 WP_001043047.1 HU family DNA-binding protein -
AN947_RS20555 () 163633..163926 + 294 WP_001239997.1 chromosome segregation protein ParM -
AN947_RS20560 () 163953..164255 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
AN947_RS20565 () 164260..164610 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
AN947_RS20570 () 164773..165321 + 549 WP_001061574.1 transcriptional regulator -
AN947_RS20580 () 165662..165856 + 195 WP_000343597.1 hypothetical protein -
AN947_RS20585 () 165867..166238 + 372 WP_000516916.1 hypothetical protein -
AN947_RS20590 () 166231..166701 + 471 WP_001281821.1 hypothetical protein -
AN947_RS20595 () 166716..167051 - 336 WP_000683476.1 hypothetical protein -
AN947_RS20600 () 167148..167636 + 489 WP_001273096.1 DUF1643 domain-containing protein -
AN947_RS20605 () 167639..168136 + 498 WP_000062185.1 hypothetical protein -
AN947_RS20615 () 168698..169630 + 933 WP_000434071.1 hypothetical protein -
AN947_RS20620 () 169704..171167 + 1464 WP_001280522.1 AAA family ATPase -
AN947_RS20625 () 171323..171652 + 330 WP_000277953.1 hypothetical protein -
AN947_RS20630 () 171657..172049 + 393 WP_000018404.1 hypothetical protein -
AN947_RS20635 () 172098..172292 + 195 WP_000757530.1 DUF2997 domain-containing protein -
AN947_RS20640 () 172286..173470 + 1185 WP_000245298.1 hypothetical protein -
AN947_RS20645 () 173482..173829 + 348 WP_000039129.1 hypothetical protein -
AN947_RS20650 () 173826..174254 + 429 WP_000988987.1 hypothetical protein -
AN947_RS20655 () 174247..174810 + 564 WP_000004673.1 hypothetical protein -
AN947_RS20660 () 174822..175310 + 489 WP_001256127.1 hypothetical protein -
AN947_RS20665 () 175216..175566 + 351 Protein_206 Type IV secretion system protein virB8 VF
AN947_RS20670 () 175577..176461 + 885 WP_000735066.1 Type IV secretion system protein virB9 VF
AN947_RS20675 () 176461..177621 + 1161 WP_000101710.1 Protein virB10 VF
AN947_RS20680 () 177663..178658 + 996 WP_000128596.1 Type IV secretion system protein VirB11 VF
AN947_RS20685 () 178658..179191 + 534 WP_000792636.1 Phospholipase D VF
AN947_RS20910 () 179365..179493 - 129 WP_002210551.1 hypothetical protein -
AN947_RS20695 () 179919..180098 + 180 Protein_212 helix-turn-helix transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance