MGE detailed information
MGE type: Conjugative plasmid MGE length: 149683 bp
Accession: NZ_CP012636 Location: 1..149683 Organism: Escherichia coli strain SF-088 Replicon: plasmid pSF-088-1
Accession: NZ_CP012636 Location: 1..149683 Organism: Escherichia coli strain SF-088 Replicon: plasmid pSF-088-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN203_RS25415 () | 637..849 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| AN203_RS25420 () | 862..1437 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| AN203_RS30335 () | 1506..1844 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| AN203_RS25430 () | 2484..3455 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AN203_RS25435 () | 3455..4621 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| AN203_RS25440 () | 4922..5619 | - | 698 | Protein_6 | IS1 family transposase IS1S | Transposase |
| AN203_RS25450 () | 6145..8346 | - | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| AN203_RS25455 () | 8428..9705 | - | 1278 | WP_060682070.1 | L-lysine N6-monooxygenase | VF |
| AN203_RS25460 () | 9702..11444 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| AN203_RS25465 () | 11444..12391 | - | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| AN203_RS25470 () | 12392..14116 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| AN203_RS25475 () | 14252..15445 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| AN203_RS25480 () | 15825..16205 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| AN203_RS25490 () | 16546..16959 | - | 414 | Protein_14 | phosphopyruvate hydratase | - |
| AN203_RS29085 () | 16957..17214 | + | 258 | Protein_15 | Tn3 family transposase | - |
| AN203_RS25495 () | 17448..18305 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| AN203_RS25500 () | 18302..19159 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| AN203_RS25505 () | 19156..19983 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| AN203_RS25510 () | 19983..20873 | - | 891 | WP_060682071.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| AN203_RS25515 () | 21254..21951 | + | 698 | Protein_20 | IS1 family transposase IS1S | Transposase |
| AN203_RS25520 () | 22131..22644 | - | 514 | Protein_21 | DUF4113 domain-containing protein | - |
| AN203_RS30340 () | 22705..22809 | - | 105 | Protein_22 | AAA family ATPase | - |
| AN203_RS25525 () | 22811..23134 | - | 324 | Protein_23 | IS21 family transposase IS21 | Transposase |
| AN203_RS25540 () | 23880..24857 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| AN203_RS25545 () | 25142..25882 | - | 741 | WP_001514245.1 | tyrosine-type recombinase/integrase | - |
| AN203_RS25550 () | 26003..26191 | - | 189 | WP_001332052.1 | hypothetical protein | - |
| AN203_RS25555 () | 26565..27467 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| AN203_RS25560 () | 27536..28645 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| AN203_RS25570 () | 29078..30031 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| AN203_RS28235 () | 31304..31462 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| AN203_RS25590 () | 31646..32859 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| AN203_RS28240 () | 33007..33332 | - | 326 | Protein_32 | IS3 family transposase ISLad1 | Transposase |
| AN203_RS25600 () | 34313..35500 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| AN203_RS25605 () | 35497..37437 | + | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| AN203_RS25610 () | 37441..38811 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| AN203_RS28250 () | 39285..39479 | + | 195 | Protein_36 | IS200-IS605 family transposase IS200C | Transposase |
| AN203_RS25615 () | 39608..40549 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| AN203_RS28260 () | 40784..42173 | - | 1390 | Protein_38 | ISNCY family transposase ISKpn21 | Transposase |
| AN203_RS29620 () | 42483..42632 | - | 150 | Protein_39 | IS3 family transposase IS2 | Transposase |
| AN203_RS25635 () | 42810..44003 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| AN203_RS25655 () | 47082..47375 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| AN203_RS28280 () | 47433..47632 | - | 200 | Protein_43 | lysis protein | - |
| AN203_RS29105 () | 48186..49285 | + | 1100 | Protein_44 | IS481 family transposase ISKpn28 | Transposase |
| AN203_RS25680 () | 50521..51636 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| AN203_RS25685 () | 51776..55435 | + | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| AN203_RS25690 () | 55539..56768 | + | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| AN203_RS25695 () | 56853..57809 | + | 957 | WP_000271277.1 | Ferri-bacillibactin esterase BesA | VF |
| AN203_RS25700 () | 57854..60031 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| AN203_RS25710 () | 60886..61920 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| AN203_RS25715 () | 62480..62788 | - | 309 | WP_000377483.1 | hypothetical protein | - |
| AN203_RS25720 () | 62887..63069 | - | 183 | WP_001514250.1 | hypothetical protein | Toxin Detail |
| AN203_RS25725 () | 63066..63263 | - | 198 | WP_001324224.1 | toxin-antitoxin system protein | Antitoxin Detail |
| AN203_RS25730 () | 63945..65219 | + | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| AN203_RS25735 () | 65194..67308 | + | 2115 | WP_001183604.1 | peptidase domain-containing ABC transporter | - |
| AN203_RS25740 () | 67478..67789 | - | 312 | WP_001259758.1 | colicin V | - |
| AN203_RS29995 () | 67767..68003 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| AN203_RS28320 () | 68164..68941 | + | 778 | Protein_58 | Gfo/Idh/MocA family oxidoreductase | - |
| AN203_RS25760 () | 68943..69212 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| AN203_RS25765 () | 69209..69475 | + | 267 | WP_001017350.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| AN203_RS25770 () | 69531..69983 | - | 453 | WP_000670963.1 | N-acetyltransferase | - |
| AN203_RS25775 () | 70276..70536 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| AN203_RS25780 () | 70533..71123 | + | 591 | WP_001518980.1 | hypothetical protein | - |
| AN203_RS25785 () | 71143..71400 | - | 258 | WP_000142431.1 | hypothetical protein | - |
| AN203_RS25790 () | 71529..71864 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| AN203_RS25795 () | 71886..73766 | - | 1881 | WP_001283335.1 | colicin | - |
| AN203_RS25800 () | 73952..74800 | - | 849 | WP_060682073.1 | 3'-5' exonuclease | - |
| AN203_RS25805 () | 74846..75127 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AN203_RS25810 () | 75124..75393 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| AN203_RS25815 () | 76037..79003 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AN203_RS25820 () | 79007..79567 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| AN203_RS30000 () | 79743..80093 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| AN203_RS25835 () | 80296..81309 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| AN203_RS25840 () | 81465..81938 | + | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| AN203_RS25845 () | 82090..82794 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AN203_RS25850 () | 82858..83196 | + | 339 | Protein_76 | recombinase family protein | - |
| AN203_RS25855 () | 83379..84239 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| AN203_RS28350 () | 84386..84667 | + | 282 | Protein_78 | transposase zinc-binding domain-containing protein | - |
| AN203_RS25860 () | 84837..85541 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AN203_RS25865 () | 85591..86310 | + | 720 | Protein_80 | AAA family ATPase | - |
| AN203_RS25870 () | 86297..87199 | + | 903 | WP_001518958.1 | hypothetical protein | - |
| AN203_RS25875 () | 87456..88271 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| AN203_RS25880 () | 88332..89135 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| AN203_RS25885 () | 89135..89971 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| AN203_RS25890 () | 90032..90736 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AN203_RS25895 () | 90801..92051 | - | 1251 | Protein_86 | transposase | - |
| AN203_RS25900 () | 92126..92794 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| AN203_RS25905 () | 92830..93066 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| AN203_RS25910 () | 93063..93425 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| AN203_RS25915 () | 93443..95137 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| AN203_RS25920 () | 95189..95611 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| AN203_RS25925 () | 95647..95922 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| AN203_RS25930 () | 95936..96286 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| AN203_RS25935 () | 96358..96792 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| AN203_RS25940 () | 97136..97993 | - | 858 | WP_001514234.1 | incFII family plasmid replication initiator RepA | - |
| AN203_RS25945 () | 97986..98060 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AN203_RS25950 () | 98285..98545 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| AN203_RS25955 () | 98785..99375 | - | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| AN203_RS25960 () | 99414..99623 | - | 210 | WP_001514235.1 | hemolysin expression modulator Hha | - |
| AN203_RS25965 () | 99669..100130 | - | 462 | WP_001514236.1 | thermonuclease family protein | - |
| AN203_RS25970 () | 100375..100587 | - | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
| AN203_RS25975 () | 100720..101280 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| AN203_RS25980 () | 101383..102243 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| AN203_RS25985 () | 102302..103048 | - | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| AN203_RS25990 () | 103068..108338 | - | 5271 | WP_001514237.1 | Multifunctional conjugation protein TraI | Relaxase |
| AN203_RS25995 () | 108338..110491 | - | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| AN203_RS26000 () | 110744..111475 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| AN203_RS26005 () | 111489..111998 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| AN203_RS26010 () | 111995..114820 | - | 2826 | WP_001007045.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AN203_RS26015 () | 114817..116190 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| AN203_RS26020 () | 116190..116552 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| AN203_RS26025 () | 116482..117027 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AN203_RS26030 () | 117014..117298 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AN203_RS26035 () | 117417..117764 | - | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| AN203_RS26040 () | 117780..118523 | - | 744 | WP_001514239.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AN203_RS26045 () | 118516..118773 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| AN203_RS26050 () | 118800..120608 | - | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AN203_RS26055 () | 120605..121243 | - | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AN203_RS26060 () | 121252..122244 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| AN203_RS26065 () | 122241..122873 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| AN203_RS26070 () | 122870..123256 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| AN203_RS26075 () | 123253..125880 | - | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| AN203_RS28380 () | 126040..126261 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| AN203_RS26080 () | 126396..126911 | - | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AN203_RS26085 () | 126908..127159 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| AN203_RS26090 () | 127171..127401 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| AN203_RS26095 () | 127355..127945 | - | 591 | WP_000002796.1 | conjugal transfer protein TraP | - |
| AN203_RS26100 () | 127935..129362 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| AN203_RS26105 () | 129362..130066 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| AN203_RS26110 () | 130077..130643 | - | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| AN203_RS26115 () | 130665..130976 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| AN203_RS26120 () | 130991..131356 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| AN203_RS26125 () | 131389..131784 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| AN203_RS26130 () | 131883..132572 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| AN203_RS26135 () | 132759..133142 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| AN203_RS26140 () | 133476..134066 | + | 591 | Protein_136 | hypothetical protein | VF |
| AN203_RS26145 () | 134362..135183 | - | 822 | WP_001234468.1 | DUF945 domain-containing protein | - |
| AN203_RS26150 () | 135302..135589 | - | 288 | WP_000107520.1 | hypothetical protein | - |
| AN203_RS30345 () | 135890..136187 | + | 298 | Protein_139 | hypothetical protein | - |
| AN203_RS26165 () | 136488..136649 | - | 162 | WP_001332444.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 136702..136913 | - | 212 | NuclAT_0 | - | - |
| - () | 136702..136913 | - | 212 | NuclAT_0 | - | - |
| - () | 136702..136913 | - | 212 | NuclAT_0 | - | - |
| - () | 136702..136913 | - | 212 | NuclAT_0 | - | - |
| AN203_RS26175 () | 136925..137644 | - | 720 | WP_000994098.1 | plasmid SOS inhibition protein A | - |
| AN203_RS26180 () | 137641..138075 | - | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| AN203_RS26185 () | 138130..140088 | - | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| AN203_RS26190 () | 140152..140385 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| AN203_RS26195 () | 140348..140980 | - | 633 | WP_000290818.1 | single-stranded DNA-binding protein | - |
| AN203_RS26205 () | 141281..141700 | + | 420 | WP_015056142.1 | hypothetical protein | - |
| AN203_RS26210 () | 141786..142349 | - | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| AN203_RS26215 () | 142397..143758 | - | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| AN203_RS26220 () | 143810..144040 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| AN203_RS26230 () | 144527..146068 | + | 1542 | WP_001518966.1 | IS21 family transposase ISEc12 | Transposase |
| AN203_RS26235 () | 146083..146829 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| AN203_RS30350 () | 147304..147632 | + | 329 | Protein_152 | pilus assembly protein | - |
| AN203_RS26245 () | 147620..147802 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| AN203_RS26250 () | 147802..148263 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| AN203_RS26255 () | 148263..148565 | - | 303 | WP_072256028.1 | antirestriction protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|