MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP012635 Location: 3751710..3772064 Organism: Escherichia coli strain SF-088 Replicon: chromosome
Accession: NZ_CP012635 Location: 3751710..3772064 Organism: Escherichia coli strain SF-088 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN203_RS18825 () | 3747075..3747533 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| AN203_RS18830 () | 3747794..3749251 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| AN203_RS18835 () | 3749308..3749922 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| AN203_RS18840 () | 3749919..3751058 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| AN203_RS18845 () | 3751248..3751700 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| AN203_RS18850 () | 3751710..3752108 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AN203_RS18855 () | 3752111..3752404 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AN203_RS18860 () | 3752456..3753511 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| AN203_RS18865 () | 3753582..3754367 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| AN203_RS18870 () | 3754339..3756051 | + | 1713 | Protein_3590 | Flagellar biosynthesis protein FlhA | VF |
| AN203_RS30080 () | 3756130..3756288 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| AN203_RS18875 () | 3756371..3756868 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| AN203_RS18880 () | 3757044..3757793 | - | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| AN203_RS18885 () | 3758105..3758845 | + | 741 | WP_060682040.1 | murein L,D-transpeptidase | - |
| AN203_RS18890 () | 3758816..3759583 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| AN203_RS18895 () | 3759788..3760366 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AN203_RS18900 () | 3760606..3763050 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| AN203_RS18905 () | 3763093..3763539 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AN203_RS18910 () | 3763720..3764490 | + | 771 | WP_000901078.1 | 2-oxoglutaramate amidase | - |
| AN203_RS29475 () | 3764541..3764735 | - | 195 | Protein_3600 | transposase | - |
| AN203_RS18915 () | 3764761..3765249 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| AN203_RS18920 () | 3765343..3765846 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| AN203_RS28935 () | 3766075..3766839 | - | 765 | Protein_3603 | ISAs1 family transposase ISEc1 | Transposase |
| AN203_RS18935 () | 3767097..3767387 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| AN203_RS18940 () | 3767362..3768801 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| AN203_RS18945 () | 3768794..3769840 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| AN203_RS18950 () | 3769947..3771929 | - | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| AN203_RS18960 () | 3772150..3772668 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| AN203_RS18965 () | 3773374..3773877 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| AN203_RS18970 () | 3773900..3775384 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| AN203_RS18975 () | 3775389..3775814 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|