MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP012633 Location: 3714653..3735007 Organism: Escherichia coli strain SF-166 Replicon: chromosome
Accession: NZ_CP012633 Location: 3714653..3735007 Organism: Escherichia coli strain SF-166 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN204_RS18250 () | 3710018..3710476 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| AN204_RS18255 () | 3710737..3712194 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| AN204_RS18260 () | 3712251..3712865 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| AN204_RS18265 () | 3712862..3714001 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| AN204_RS18270 () | 3714191..3714643 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| AN204_RS18275 () | 3714653..3715051 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AN204_RS18280 () | 3715054..3715347 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AN204_RS18285 () | 3715399..3716454 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| AN204_RS18290 () | 3716525..3717310 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| AN204_RS18295 () | 3717282..3718994 | + | 1713 | Protein_3491 | Flagellar biosynthesis protein FlhA | VF |
| AN204_RS28080 () | 3719073..3719231 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| AN204_RS18300 () | 3719314..3719811 | - | 498 | WP_001557224.1 | REP-associated tyrosine transposase RayT | - |
| AN204_RS18305 () | 3719987..3720736 | - | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| AN204_RS18310 () | 3721048..3721788 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| AN204_RS18315 () | 3721759..3722526 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| AN204_RS18320 () | 3722731..3723309 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AN204_RS18325 () | 3723549..3725993 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| AN204_RS18330 () | 3726036..3726482 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AN204_RS18335 () | 3726663..3727433 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| AN204_RS27840 () | 3727484..3727678 | - | 195 | Protein_3501 | transposase | - |
| AN204_RS18340 () | 3727704..3728192 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| AN204_RS18345 () | 3728286..3728789 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| AN204_RS27290 () | 3729018..3729782 | - | 765 | Protein_3504 | ISAs1 family transposase ISEc1 | Transposase |
| AN204_RS18360 () | 3730040..3730330 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| AN204_RS18365 () | 3730305..3731744 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| AN204_RS18370 () | 3731737..3732783 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| AN204_RS18375 () | 3732890..3734872 | - | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| AN204_RS18385 () | 3735093..3735611 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| AN204_RS18390 () | 3736317..3736820 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| AN204_RS18395 () | 3736843..3738327 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| AN204_RS18400 () | 3738332..3738757 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|