MGE detailed information
MGE type: Genomic_island MGE length: 25291 bp
Accession: NZ_CP012631 Location: 4259279..4284569 Organism: Escherichia coli strain SF-173 Replicon: chromosome
Accession: NZ_CP012631 Location: 4259279..4284569 Organism: Escherichia coli strain SF-173 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN205_RS21185 () | 4255804..4256529 | - | 726 | WP_000066579.1 | type 1 fimbria chaperone FimC | - |
| AN205_RS21190 () | 4256566..4257105 | - | 540 | WP_000824098.1 | type 1 fimbrial protein | - |
| AN205_RS21195 () | 4257170..4257724 | - | 555 | WP_000695580.1 | type 1 fimbrial major subunit FimA | - |
| AN205_RS21205 () | 4258205..4258801 | - | 597 | WP_000044708.1 | type 1 fimbria switch DNA invertase FimE | - |
| AN205_RS21210 () | 4259279..4259881 | - | 603 | WP_000790574.1 | Tyrosine recombinase XerC | VF |
| AN205_RS21225 () | 4261347..4262063 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| AN205_RS21230 () | 4262083..4263189 | + | 1107 | WP_001298082.1 | N-acetylneuraminate epimerase | - |
| AN205_RS21235 () | 4263254..4264234 | + | 981 | WP_000991428.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| AN205_RS27175 () | 4264242..4264364 | - | 123 | WP_001298017.1 | hypothetical protein | - |
| AN205_RS21240 () | 4264446..4265318 | + | 873 | WP_042017238.1 | HNH endonuclease | - |
| AN205_RS21245 () | 4265363..4265542 | + | 180 | WP_001298063.1 | hypothetical protein | - |
| AN205_RS21250 () | 4265941..4267917 | - | 1977 | WP_000464678.1 | hypothetical protein | - |
| AN205_RS21255 () | 4269166..4269363 | - | 198 | WP_000839272.1 | DUF957 domain-containing protein | - |
| AN205_RS21260 () | 4269375..4269863 | - | 489 | WP_000761683.1 | hypothetical protein | - |
| AN205_RS21265 () | 4269860..4270237 | - | 378 | WP_001094426.1 | TA system toxin CbtA family protein | Toxin Detail |
| AN205_RS21270 () | 4270327..4270695 | - | 369 | WP_001285575.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AN205_RS21275 () | 4270775..4270996 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| AN205_RS21280 () | 4271083..4271559 | - | 477 | WP_001298074.1 | RadC family protein | - |
| AN205_RS21285 () | 4271574..4272059 | - | 486 | WP_000213697.1 | antirestriction protein | - |
| AN205_RS21290 () | 4272150..4272968 | - | 819 | WP_001175160.1 | DUF945 domain-containing protein | - |
| AN205_RS21295 () | 4273058..4273291 | - | 234 | WP_001278290.1 | DUF905 family protein | - |
| AN205_RS21300 () | 4273297..4273974 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| AN205_RS21305 () | 4274122..4274802 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| AN205_RS21315 () | 4275005..4275889 | - | 885 | WP_000010377.1 | 50S ribosome-binding GTPase | - |
| AN205_RS21320 () | 4275990..4277213 | + | 1224 | WP_001107221.1 | hypothetical protein | - |
| AN205_RS21330 () | 4278696..4279427 | + | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| AN205_RS21335 () | 4279755..4280633 | + | 879 | WP_000769117.1 | restriction endonuclease | - |
| AN205_RS28095 () | 4280689..4281368 | - | 680 | Protein_4088 | transposase | - |
| AN205_RS28925 () | 4281621..4281737 | + | 117 | Protein_4089 | phosphoporin PhoE | - |
| AN205_RS27200 () | 4281739..4281872 | + | 134 | Protein_4090 | phosphate-starvation-inducible protein PsiE | - |
| AN205_RS21350 () | 4281947..4283398 | - | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| AN205_RS21355 () | 4283391..4284569 | - | 1179 | WP_001534804.1 | pyridoxal phosphate-dependent aminotransferase | - |
| AN205_RS21365 () | 4285043..4286256 | + | 1214 | WP_164504460.1 | IS3 family transposase | - |
| AN205_RS21375 () | 4286547..4287125 | + | 579 | WP_000926368.1 | TetR/AcrR family transcriptional regulator | - |
| AN205_RS21380 () | 4287148..4287966 | + | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| AN205_RS21385 () | 4287966..4288484 | + | 519 | WP_001217008.1 | hypothetical protein | - |
| AN205_RS21395 () | 4289004..4289282 | + | 279 | WP_000502008.1 | BMC domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|