MGE detailed information
MGE type: Conjugative plasmid MGE length: 92766 bp
Accession: NZ_CP012627 Location: 1..92766 Organism: Escherichia coli strain SF-468 Replicon: plasmid pSF-468-2
Accession: NZ_CP012627 Location: 1..92766 Organism: Escherichia coli strain SF-468 Replicon: plasmid pSF-468-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN206_RS26675 () | 333..1300 | - | 968 | Protein_1 | IS5 family transposase IS903B | Transposase |
| AN206_RS26680 () | 1335..2210 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| AN206_RS26690 () | 2460..3707 | - | 1248 | Protein_3 | IS1380 family transposase | - |
| AN206_RS26695 () | 3860..5415 | - | 1556 | Protein_4 | colicin | - |
| AN206_RS26700 () | 5694..7040 | - | 1347 | WP_001132033.1 | hypothetical protein | - |
| AN206_RS26705 () | 7395..7998 | + | 604 | Protein_6 | proQ/FINO family protein | - |
| AN206_RS26710 () | 8054..8563 | + | 510 | WP_000045394.1 | hypothetical protein | - |
| AN206_RS26715 () | 9632..10663 | - | 1032 | WP_048257187.1 | replication initiation protein | - |
| AN206_RS26725 () | 11636..11899 | + | 264 | WP_001749178.1 | ash family protein | - |
| AN206_RS26730 () | 11817..12104 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| AN206_RS26735 () | 12546..13079 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| AN206_RS26740 () | 13333..14016 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| AN206_RS26745 () | 14189..14740 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| AN206_RS26750 () | 14902..15156 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| AN206_RS26755 () | 15323..15619 | + | 297 | WP_050571830.1 | hypothetical protein | - |
| AN206_RS26760 () | 16243..17310 | + | 1068 | WP_012783947.1 | hypothetical protein | VF |
| AN206_RS26765 () | 17310..17747 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| AN206_RS26770 () | 17761..19443 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| AN206_RS26775 () | 19436..20731 | + | 1296 | WP_001388364.1 | type 4b pilus protein PilO2 | - |
| AN206_RS26780 () | 20718..21170 | + | 453 | WP_001247870.1 | hypothetical protein | VF |
| AN206_RS26785 () | 21181..22734 | + | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| AN206_RS26790 () | 22747..23844 | + | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| AN206_RS26795 () | 23862..24476 | + | 615 | WP_001542527.1 | hypothetical protein | VF |
| AN206_RS26800 () | 24486..25046 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| AN206_RS26805 () | 25031..25687 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| AN206_RS26810 () | 25687..26967 | + | 1281 | Protein_26 | hypothetical protein | VF |
| AN206_RS26815 () | 28634..29788 | + | 1155 | WP_001139955.1 | integrase | - |
| AN206_RS26820 () | 29939..30763 | + | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| AN206_RS26825 () | 30849..32051 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| AN206_RS26830 () | 32111..32695 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| AN206_RS26835 () | 33089..33547 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| AN206_RS26840 () | 33544..34362 | + | 819 | WP_000646098.1 | hypothetical protein | VF |
| AN206_RS26845 () | 34359..35507 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| AN206_RS29310 () | 35504..35794 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| AN206_RS26850 () | 35809..36360 | + | 552 | WP_000014583.1 | Phospholipase D | VF |
| AN206_RS26855 () | 36450..40217 | + | 3768 | WP_001141527.1 | DNA primase | - |
| AN206_RS26860 () | 40235..40582 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| AN206_RS26865 () | 40579..41271 | + | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| AN206_RS26870 () | 41282..42265 | + | 984 | WP_001191877.1 | hypothetical protein | VF |
| AN206_RS26875 () | 42268..43557 | + | 1290 | WP_042004726.1 | conjugal transfer protein TraO | - |
| AN206_RS26880 () | 43557..44261 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| AN206_RS26885 () | 44261..44788 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| AN206_RS26890 () | 44839..45243 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| AN206_RS26895 () | 45307..45495 | + | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| AN206_RS26900 () | 45479..46279 | + | 801 | WP_001164784.1 | IncI1-type conjugal transfer protein TraT | - |
| AN206_RS26905 () | 46369..49413 | + | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| AN206_RS26910 () | 49413..50027 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| AN206_RS26915 () | 49994..51196 | + | 1203 | WP_042004725.1 | IncI1-type conjugal transfer protein TraW | - |
| AN206_RS26920 () | 51225..51809 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| AN206_RS26925 () | 51906..54074 | + | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| AN206_RS26930 () | 54148..54798 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AN206_RS26935 () | 54870..55079 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| AN206_RS31080 () | 55471..55647 | + | 177 | WP_001054898.1 | hypothetical protein | - |
| AN206_RS26950 () | 56306..56557 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| AN206_RS26955 () | 56629..56781 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - () | 56836..56893 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 56836..56893 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 56836..56893 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 56836..56893 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 57134..57189 | + | 56 | NuclAT_1 | - | - |
| - () | 57134..57189 | + | 56 | NuclAT_1 | - | - |
| - () | 57134..57189 | + | 56 | NuclAT_1 | - | - |
| - () | 57134..57189 | + | 56 | NuclAT_1 | - | - |
| AN206_RS26960 () | 57350..58336 | + | 987 | WP_001257838.1 | hypothetical protein | - |
| AN206_RS26965 () | 58554..59762 | + | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| AN206_RS26970 () | 59781..60851 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| AN206_RS26975 () | 60844..63135 | + | 2292 | WP_021520372.1 | hypothetical protein | - |
| AN206_RS26980 () | 63172..65871 | - | 2700 | WP_021520371.1 | Protein TraI | Relaxase |
| AN206_RS26985 () | 65882..66214 | - | 333 | WP_001281051.1 | hypothetical protein | - |
| AN206_RS26990 () | 66447..66782 | + | 336 | WP_024227040.1 | hypothetical protein | - |
| AN206_RS26995 () | 66868..67716 | - | 849 | WP_024227041.1 | DUF4942 domain-containing protein | - |
| AN206_RS31085 () | 68065..68262 | + | 198 | WP_071791907.1 | hypothetical protein | - |
| AN206_RS27000 () | 68296..68547 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| AN206_RS27005 () | 68578..68823 | - | 246 | WP_073853190.1 | hypothetical protein | - |
| AN206_RS27010 () | 68823..69737 | - | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| AN206_RS27015 () | 69802..70068 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| AN206_RS27020 () | 70162..70596 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| AN206_RS27025 () | 71326..71827 | - | 502 | Protein_70 | antirestriction protein ArdA | - |
| AN206_RS27035 () | 72290..72886 | - | 597 | WP_024227064.1 | hypothetical protein | - |
| AN206_RS27040 () | 72883..73604 | - | 722 | Protein_72 | plasmid SOS inhibition protein A | - |
| AN206_RS27045 () | 73601..74035 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| AN206_RS27050 () | 74090..76048 | - | 1959 | WP_042004724.1 | ParB/RepB/Spo0J family partition protein | - |
| AN206_RS27055 () | 76107..76340 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| AN206_RS27060 () | 76398..76926 | - | 529 | Protein_76 | single-stranded DNA-binding protein | - |
| AN206_RS31090 () | 77295..77363 | + | 69 | Protein_77 | pilus protein | - |
| AN206_RS27070 () | 77698..77889 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| AN206_RS27075 () | 77886..78308 | - | 423 | WP_016231291.1 | DUF1380 family protein | - |
| AN206_RS27080 () | 78355..78657 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| AN206_RS30730 () | 79199..79969 | - | 771 | WP_001006206.1 | hypothetical protein | - |
| AN206_RS27095 () | 80014..80448 | - | 435 | WP_000274499.1 | DUF1380 family protein | - |
| AN206_RS27100 () | 80462..80683 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| AN206_RS27105 () | 80684..81367 | - | 684 | WP_001474699.1 | DNA methylase | - |
| AN206_RS30095 () | 81443..81754 | - | 312 | WP_032143956.1 | hypothetical protein | - |
| AN206_RS27115 () | 81751..82653 | - | 903 | WP_126122062.1 | DUF1281 domain-containing protein | - |
| AN206_RS27120 () | 83071..83319 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| AN206_RS27125 () | 83316..83753 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AN206_RS27130 () | 83753..85027 | + | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| AN206_RS27135 () | 85029..85445 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| AN206_RS27140 () | 85438..86418 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| AN206_RS27145 () | 86832..87140 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| AN206_RS27150 () | 87227..87871 | - | 645 | WP_001144036.1 | ParA family protein | - |
| AN206_RS27155 () | 88052..88831 | - | 780 | WP_024227071.1 | site-specific integrase | - |
| AN206_RS27160 () | 88833..89246 | - | 414 | WP_000465036.1 | hypothetical protein | - |
| AN206_RS27165 () | 89815..90072 | + | 258 | WP_000371885.1 | hypothetical protein | - |
| AN206_RS27170 () | 90072..90662 | + | 591 | WP_024227072.1 | hypothetical protein | - |
| AN206_RS27175 () | 90682..91029 | - | 348 | WP_016231295.1 | hypothetical protein | - |
| AN206_RS27180 () | 91158..91493 | + | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| AN206_RS27185 () | 91515..91874 | - | 360 | WP_071889081.1 | colicin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|