MGE detailed information
MGE type: IScluster/Tn MGE length: 7722 bp
Accession: NZ_CP012506 Location: 3794517..3802238 Organism: Mycobacterium tuberculosis strain SCAID 187.0 Replicon: chromosome
Accession: NZ_CP012506 Location: 3794517..3802238 Organism: Mycobacterium tuberculosis strain SCAID 187.0 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFL40_RS17825 () | 3789571..3790224 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| AFL40_RS17830 () | 3790263..3791768 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| AFL40_RS17835 () | 3791773..3792663 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| AFL40_RS17840 () | 3792672..3794474 | - | 1803 | WP_078450917.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| AFL40_RS17855 () | 3795865..3796854 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AFL40_RS17860 () | 3796854..3797243 | - | 390 | Protein_3486 | polyprenyl synthetase family protein | - |
| AFL40_RS17870 () | 3797296..3798557 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| AFL40_RS17875 () | 3798599..3799264 | - | 666 | Protein_3488 | polyprenyl synthetase family protein | - |
| AFL40_RS17880 () | 3800018..3800410 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AFL40_RS17885 () | 3800410..3800685 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AFL40_RS21790 () | 3800897..3802238 | + | 1342 | Protein_3491 | ISNCY family transposase ISRjo3 | Transposase |
| AFL40_RS17900 () | 3802428..3804605 | + | 2178 | WP_016330440.1 | PE family protein | - |
| AFL40_RS17905 () | 3804676..3805548 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| AFL40_RS17910 () | 3805622..3806332 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.001 |