MGE detailed information
MGE type: Prophage MGE length: 32607 bp
Accession: NZ_CP012506 Location: 3543681..3576287 Organism: Mycobacterium tuberculosis strain SCAID 187.0 Replicon: chromosome
Accession: NZ_CP012506 Location: 3543681..3576287 Organism: Mycobacterium tuberculosis strain SCAID 187.0 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFL40_RS16725 () | 3538783..3539739 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| AFL40_RS16730 () | 3539886..3540746 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| AFL40_RS16735 () | 3540721..3541236 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| AFL40_RS16740 () | 3541476..3541769 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| AFL40_RS16745 () | 3542057..3543346 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| AFL40_RS16760 () | 3545051..3545485 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| AFL40_RS16765 () | 3545488..3545940 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| AFL40_RS16770 () | 3546171..3546515 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AFL40_RS16775 () | 3546512..3546841 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| AFL40_RS16785 () | 3547075..3548336 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| AFL40_RS16795 () | 3548556..3549817 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| AFL40_RS16800 () | 3550090..3550437 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| AFL40_RS16805 () | 3550434..3551054 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| AFL40_RS16810 () | 3551214..3552479 | - | 1266 | WP_003902423.1 | hypothetical protein | - |
| AFL40_RS16815 () | 3552647..3552856 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| AFL40_RS16825 () | 3553103..3554137 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| AFL40_RS16830 () | 3554421..3554645 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| AFL40_RS16840 () | 3555355..3555816 | + | 462 | WP_003416793.1 | LLM class flavin-dependent oxidoreductase | - |
| AFL40_RS16845 () | 3555986..3558964 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| AFL40_RS16850 () | 3559056..3560078 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| AFL40_RS16855 () | 3560156..3561574 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| AFL40_RS16860 () | 3561613..3562479 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| AFL40_RS16865 () | 3562488..3562661 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| AFL40_RS16870 () | 3562816..3564159 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| AFL40_RS16875 () | 3564193..3564471 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| AFL40_RS16880 () | 3564901..3567003 | - | 2103 | WP_025096321.1 | ATP-dependent DNA helicase UvrD2 | - |
| AFL40_RS16885 () | 3567127..3567381 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| AFL40_RS16890 () | 3567394..3568335 | - | 942 | WP_003906027.1 | NAD(+) diphosphatase | - |
| AFL40_RS16895 () | 3568394..3569461 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| AFL40_RS16900 () | 3569523..3572828 | - | 3306 | WP_003910809.1 | ATP-dependent DNA helicase AdnB | - |
| AFL40_RS16905 () | 3572825..3575992 | - | 3168 | WP_003901568.1 | ATP-dependent DNA helicase AdnA | - |
| AFL40_RS16910 () | 3576078..3576287 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| AFL40_RS16915 () | 3576318..3577103 | + | 786 | WP_003899968.1 | lipase LipV | - |
| AFL40_RS16920 () | 3577106..3577411 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| AFL40_RS16925 () | 3577418..3578272 | - | 855 | WP_003416850.1 | TIGR02569 family protein | - |
| AFL40_RS16930 () | 3578323..3579501 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| AFL40_RS16935 () | 3579592..3580620 | - | 1029 | WP_003899970.1 | DUF3152 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.002 |