MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 31951 bp
Accession: NZ_CP012417 Location: 1..31951 Organism: Piscirickettsia salmonis strain PM15972A1 Replicon: plasmid pPSA1-4
Accession: NZ_CP012417 Location: 1..31951 Organism: Piscirickettsia salmonis strain PM15972A1 Replicon: plasmid pPSA1-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KW89_RS16315 () | 73..291 | - | 219 | WP_054300678.1 | hypothetical protein | - |
| KW89_RS16320 () | 295..561 | - | 267 | WP_016211142.1 | DUF4035 domain-containing protein | - |
| KW89_RS16325 () | 618..941 | - | 324 | WP_032126913.1 | hypothetical protein | - |
| KW89_RS16330 () | 943..1365 | - | 423 | WP_016211141.1 | hypothetical protein | - |
| KW89_RS16335 () | 1365..1715 | - | 351 | WP_016211129.1 | DUF3168 domain-containing protein | - |
| KW89_RS16340 () | 1712..2107 | - | 396 | WP_016211139.1 | HK97 gp10 family phage protein | - |
| KW89_RS16345 () | 2100..2423 | - | 324 | WP_016211132.1 | phage head closure protein | - |
| KW89_RS16350 () | 2420..2731 | - | 312 | WP_016211137.1 | head-tail connector protein | - |
| KW89_RS18380 () | 2728..2883 | - | 156 | WP_016211131.1 | hypothetical protein | - |
| KW89_RS16355 () | 2922..4256 | - | 1335 | WP_016211133.1 | hypothetical protein | - |
| KW89_RS16360 () | 4377..4610 | - | 234 | Protein_10 | phage major capsid protein | - |
| KW89_RS16365 () | 4702..5382 | + | 681 | WP_054300680.1 | IS30 family transposase ISPlu1 | Transposase |
| KW89_RS17550 () | 5409..6295 | + | 887 | WP_155046942.1 | IS630 family transposase ISAcma25 | Transposase |
| KW89_RS16380 () | 6303..6635 | + | 333 | Protein_13 | IS30 family transposase IS4351 | Transposase |
| KW89_RS16385 () | 6632..7132 | - | 501 | WP_054300681.1 | hypothetical protein | Relaxase |
| KW89_RS16390 () | 7171..7473 | - | 303 | WP_054300682.1 | hypothetical protein | - |
| KW89_RS16395 () | 7628..7933 | - | 306 | WP_016211079.1 | hypothetical protein | - |
| KW89_RS16400 () | 8143..8886 | - | 744 | WP_016211067.1 | helix-turn-helix transcriptional regulator | - |
| KW89_RS16405 () | 9019..9804 | + | 786 | WP_016211077.1 | Trans-aconitate 2-methyltransferase | VF |
| KW89_RS16410 () | 9812..10597 | - | 786 | WP_032126922.1 | queuosine precursor transporter | - |
| KW89_RS16415 () | 10581..11012 | - | 432 | WP_016211069.1 | hypothetical protein | - |
| KW89_RS18165 () | 11037..11180 | - | 144 | WP_155047030.1 | hypothetical protein | - |
| KW89_RS16420 () | 11395..12636 | + | 1242 | WP_054300683.1 | MFS transporter | - |
| KW89_RS16425 () | 12640..13452 | + | 813 | WP_016211068.1 | hypothetical protein | VF |
| KW89_RS16430 () | 13449..14249 | - | 801 | WP_054300684.1 | methyltransferase domain-containing protein | - |
| KW89_RS16435 () | 14353..14706 | - | 354 | WP_054300685.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| KW89_RS16440 () | 14699..14959 | - | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| KW89_RS16445 () | 15221..15688 | - | 468 | WP_036781099.1 | hypothetical protein | - |
| KW89_RS16450 () | 15702..15935 | - | 234 | WP_036781101.1 | hypothetical protein | - |
| KW89_RS16455 () | 15978..16232 | - | 255 | WP_054300687.1 | DUF4160 domain-containing protein | - |
| KW89_RS16460 () | 16596..17963 | - | 1368 | WP_054300688.1 | hypothetical protein | - |
| KW89_RS16465 () | 17980..18972 | - | 993 | WP_054300689.1 | ParA family protein | - |
| KW89_RS16470 () | 19611..19835 | + | 225 | Protein_32 | hypothetical protein | - |
| KW89_RS16475 () | 20040..20303 | + | 264 | WP_054300690.1 | RNA-binding protein | - |
| KW89_RS17555 () | 20509..21483 | - | 975 | WP_054300276.1 | IS30 family transposase ISPlu1 | Transposase |
| KW89_RS16485 () | 21657..22085 | - | 429 | WP_054300691.1 | hypothetical protein | - |
| KW89_RS16490 () | 22087..22524 | - | 438 | WP_054300692.1 | hypothetical protein | - |
| KW89_RS16495 () | 22524..23177 | - | 654 | WP_054300693.1 | DUF4376 domain-containing protein | - |
| KW89_RS16500 () | 23189..24328 | - | 1140 | WP_054300694.1 | hypothetical protein | - |
| KW89_RS16505 () | 24328..27615 | - | 3288 | WP_054300695.1 | host specificity protein J | - |
| KW89_RS16510 () | 27612..28169 | - | 558 | WP_054300696.1 | tail assembly protein | - |
| KW89_RS16515 () | 28159..28905 | - | 747 | WP_032126911.1 | C40 family peptidase | - |
| KW89_RS16520 () | 28874..29545 | - | 672 | WP_016210666.1 | phage minor tail protein L | - |
| KW89_RS16525 () | 29542..29883 | - | 342 | WP_036776958.1 | phage tail protein | - |
| KW89_RS16530 () | 29876..31852 | - | 1977 | Protein_44 | phage tail tape measure protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|