MGE detailed information
MGE type: Conjugative plasmid MGE length: 125121 bp
Accession: NZ_CP012377 Location: 1..125121 Organism: Escherichia coli strain GE3 isolate human faeces Replicon: plasmid pGE3
Accession: NZ_CP012377 Location: 1..125121 Organism: Escherichia coli strain GE3 isolate human faeces Replicon: plasmid pGE3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AKN41_RS24000 () | 90..3554 | - | 3465 | WP_149032432.1 | hypothetical protein | - |
| AKN41_RS24005 () | 3551..10288 | - | 6738 | WP_149032433.1 | hypothetical protein | - |
| AKN41_RS24010 () | 10563..11810 | - | 1248 | WP_032261224.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| AKN41_RS24015 () | 11870..14017 | - | 2148 | WP_001620877.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| AKN41_RS24020 () | 14014..15282 | - | 1269 | WP_032261223.1 | TolC family protein | - |
| AKN41_RS24025 () | 15340..15642 | - | 303 | WP_001774321.1 | Major pilu subunit operon regulatory protein PapB | VF |
| AKN41_RS24030 () | 16189..17337 | + | 1149 | Protein_7 | IS3 family transposase | - |
| AKN41_RS24045 () | 18162..19277 | + | 1116 | WP_001620858.1 | Elloramycin glycosyltransferase ElmGT | VF |
| AKN41_RS24050 () | 19417..23076 | + | 3660 | WP_021552516.1 | Multidrug efflux ATP-binding/permease protein | VF |
| AKN41_RS24055 () | 23180..24409 | + | 1230 | WP_032197571.1 | Enterochelin esterase | VF |
| AKN41_RS24060 () | 24494..25450 | + | 957 | WP_001620854.1 | Ferri-bacillibactin esterase BesA | VF |
| AKN41_RS24065 () | 25495..27672 | - | 2178 | WP_001620853.1 | Ferrienterobactin receptor | VF |
| AKN41_RS24080 () | 28444..29478 | - | 1035 | WP_001620850.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| AKN41_RS24090 () | 30038..30346 | - | 309 | WP_042110166.1 | hypothetical protein | - |
| AKN41_RS24095 () | 30501..30737 | - | 237 | WP_032257624.1 | colicin V immunity protein | - |
| AKN41_RS24100 () | 31187..31468 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| AKN41_RS24105 () | 31573..31848 | - | 276 | WP_001620845.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AKN41_RS24110 () | 31848..32132 | - | 285 | WP_024188746.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AKN41_RS24125 () | 33047..33904 | - | 858 | WP_001774315.1 | incFII family plasmid replication initiator RepA | - |
| AKN41_RS24130 () | 33897..33971 | - | 75 | WP_001367777.1 | RepA leader peptide Tap | - |
| AKN41_RS24140 () | 34205..34462 | - | 258 | WP_032082917.1 | replication regulatory protein RepA | - |
| AKN41_RS24145 () | 34702..35292 | - | 591 | WP_042109322.1 | DUF2726 domain-containing protein | - |
| AKN41_RS24150 () | 35330..35539 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| AKN41_RS24155 () | 35585..36046 | - | 462 | WP_001233868.1 | thermonuclease family protein | - |
| AKN41_RS24160 () | 36295..36507 | - | 213 | WP_032197545.1 | ANR family transcriptional regulator | - |
| AKN41_RS24165 () | 36643..37203 | - | 561 | WP_032261209.1 | fertility inhibition protein FinO | - |
| AKN41_RS24170 () | 37258..38004 | - | 747 | WP_032261208.1 | conjugal transfer pilus acetylase TraX | - |
| AKN41_RS24175 () | 38024..43294 | - | 5271 | WP_149032434.1 | Multifunctional conjugation protein TraI | Relaxase |
| AKN41_RS24180 () | 43294..45501 | - | 2208 | WP_149032435.1 | type IV conjugative transfer system coupling protein TraD | - |
| AKN41_RS24185 () | 45627..46010 | + | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| AKN41_RS24190 () | 46007..46354 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| AKN41_RS24195 () | 46404..47939 | + | 1536 | WP_001000406.1 | IS66 family transposase ISSgsp1 | Transposase |
| AKN41_RS24200 () | 48073..48498 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| AKN41_RS24205 () | 48495..48845 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| AKN41_RS24210 () | 48876..50489 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| AKN41_RS24220 () | 50739..51470 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| AKN41_RS24225 () | 51502..51999 | - | 498 | WP_032143850.1 | entry exclusion protein | - |
| AKN41_RS24230 () | 52015..54837 | - | 2823 | WP_032261203.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AKN41_RS24235 () | 54834..56207 | - | 1374 | WP_042109313.1 | conjugal transfer protein TraH | - |
| AKN41_RS24240 () | 56207..56620 | - | 414 | WP_071600849.1 | F-type conjugal transfer protein TrbF | - |
| AKN41_RS24245 () | 56574..56915 | - | 342 | WP_071589462.1 | P-type conjugative transfer protein TrbJ | - |
| AKN41_RS24250 () | 56845..57390 | - | 546 | WP_001595260.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AKN41_RS24255 () | 57377..57658 | - | 282 | WP_001595262.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AKN41_RS24265 () | 58037..58402 | - | 366 | WP_001774302.1 | hypothetical protein | - |
| AKN41_RS24270 () | 58416..59159 | - | 744 | WP_141035998.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AKN41_RS24275 () | 59152..59409 | - | 258 | WP_001595267.1 | conjugal transfer protein TrbE | - |
| AKN41_RS24280 () | 59436..60659 | - | 1224 | Protein_47 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AKN41_RS24285 () | 60747..61172 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| AKN41_RS24290 () | 61169..61519 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| AKN41_RS24295 () | 61550..63163 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| AKN41_RS24300 () | 63194..63784 | - | 591 | Protein_51 | conjugal transfer protein TraN | - |
| AKN41_RS24305 () | 63781..64419 | - | 639 | WP_001595269.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AKN41_RS24310 () | 64428..65420 | - | 993 | WP_032261201.1 | conjugal transfer pilus assembly protein TraU | - |
| AKN41_RS24315 () | 65417..66049 | - | 633 | WP_021552505.1 | type-F conjugative transfer system protein TraW | - |
| AKN41_RS24320 () | 66046..66432 | - | 387 | WP_032261198.1 | type-F conjugative transfer system protein TrbI | - |
| AKN41_RS24325 () | 66429..69056 | - | 2628 | WP_096096376.1 | type IV secretion system protein TraC | - |
| AKN41_RS24330 () | 69216..69437 | - | 222 | WP_001774296.1 | conjugal transfer protein TraR | - |
| AKN41_RS24335 () | 69572..70087 | - | 516 | WP_032197504.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AKN41_RS24340 () | 70084..70227 | - | 144 | Protein_59 | conjugal transfer protein TrbG | - |
| AKN41_RS24345 () | 70289..71445 | + | 1157 | WP_089538410.1 | IS3 family transposase ISSd1 | Transposase |
| AKN41_RS24350 () | 71489..71602 | - | 114 | Protein_61 | conjugal transfer protein TrbG | - |
| AKN41_RS24355 () | 71614..71844 | - | 231 | WP_071780648.1 | conjugal transfer protein TrbD | - |
| AKN41_RS24360 () | 71798..72388 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| AKN41_RS24365 () | 72378..73805 | - | 1428 | WP_032261195.1 | conjugal transfer protein TraB | - |
| AKN41_RS24370 () | 73805..74509 | - | 705 | WP_148718337.1 | type-F conjugative transfer system secretin TraK | - |
| AKN41_RS24375 () | 74520..75086 | - | 567 | WP_001717262.1 | type IV conjugative transfer system protein TraE | - |
| AKN41_RS24380 () | 75108..75419 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| AKN41_RS24385 () | 75434..75799 | - | 366 | WP_044809698.1 | type IV conjugative transfer system pilin TraA | - |
| AKN41_RS24390 () | 75833..76060 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| AKN41_RS24395 () | 76154..76840 | - | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| AKN41_RS24400 () | 77030..77413 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| AKN41_RS24410 () | 77747..78337 | + | 591 | WP_167778863.1 | hypothetical protein | VF |
| AKN41_RS24830 () | 78633..79453 | - | 821 | Protein_73 | DUF932 domain-containing protein | - |
| AKN41_RS24425 () | 79573..79860 | - | 288 | WP_001523521.1 | hypothetical protein | - |
| AKN41_RS24440 () | 80407..80565 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 80630..80824 | - | 195 | NuclAT_0 | - | - |
| - () | 80630..80824 | - | 195 | NuclAT_0 | - | - |
| - () | 80630..80824 | - | 195 | NuclAT_0 | - | - |
| - () | 80630..80824 | - | 195 | NuclAT_0 | - | - |
| AKN41_RS24445 () | 80836..81555 | - | 720 | Protein_76 | plasmid SOS inhibition protein A | - |
| AKN41_RS24450 () | 81552..81986 | - | 435 | WP_001297861.1 | conjugation system SOS inhibitor PsiB | - |
| AKN41_RS24455 () | 82041..84005 | - | 1965 | WP_001587501.1 | ParB/RepB/Spo0J family partition protein | - |
| AKN41_RS24460 () | 84071..84304 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| AKN41_RS24465 () | 84362..84889 | - | 528 | WP_000290825.1 | single-stranded DNA-binding protein | - |
| AKN41_RS24470 () | 84915..85121 | - | 207 | WP_000275848.1 | hypothetical protein | - |
| AKN41_RS24495 () | 85671..85862 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| AKN41_RS24500 () | 85859..86281 | - | 423 | WP_032261191.1 | DUF1380 family protein | - |
| AKN41_RS24505 () | 86328..86630 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| AKN41_RS24525 () | 87604..88575 | - | 972 | WP_001519995.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AKN41_RS24530 () | 88575..89741 | - | 1167 | WP_001519994.1 | Sporulation initiation inhibitor protein Soj | VF |
| AKN41_RS24535 () | 90204..90401 | - | 198 | Protein_87 | CcdB family protein | - |
| AKN41_RS24540 () | 90523..91281 | + | 759 | Protein_88 | IS21 family transposase | - |
| AKN41_RS24545 () | 91670..92122 | - | 453 | WP_001519992.1 | N-acetyltransferase | - |
| AKN41_RS24550 () | 92275..92664 | + | 390 | Protein_90 | hypothetical protein | - |
| AKN41_RS24555 () | 92684..93031 | - | 348 | WP_063077242.1 | hypothetical protein | - |
| AKN41_RS24560 () | 93160..93495 | + | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| AKN41_RS24565 () | 93517..95397 | - | 1881 | WP_089538283.1 | colicin | - |
| AKN41_RS24570 () | 95742..96035 | - | 294 | WP_001097404.1 | YqjK-like family protein | - |
| AKN41_RS24575 () | 96032..96433 | - | 402 | WP_001258981.1 | phage holin family protein | - |
| AKN41_RS24580 () | 96517..96870 | - | 354 | WP_000990989.1 | hypothetical protein | - |
| AKN41_RS24585 () | 96942..97190 | - | 249 | WP_000467268.1 | DUF883 family protein | - |
| AKN41_RS24590 () | 97775..98092 | - | 318 | WP_000845366.1 | Major pilu subunit operon regulatory protein PapB | VF |
| AKN41_RS24600 () | 98759..99751 | - | 993 | WP_032261187.1 | hypothetical protein | - |
| AKN41_RS24605 () | 99779..100279 | - | 501 | WP_157897006.1 | fimbrial protein | - |
| AKN41_RS24610 () | 100320..100835 | - | 516 | WP_001077949.1 | hypothetical protein | VF |
| AKN41_RS24615 () | 100872..101603 | - | 732 | WP_001171047.1 | Chaperone protein PapD | VF |
| AKN41_RS24620 () | 101672..104182 | - | 2511 | WP_042108364.1 | Outer membrane usher protein PapC | VF |
| AKN41_RS24625 () | 104303..104890 | - | 588 | WP_001297837.1 | PAP fimbrial minor pilin protein | VF |
| AKN41_RS24630 () | 104966..105493 | - | 528 | WP_149032436.1 | Pap fimbrial major pilin protein | VF |
| AKN41_RS24635 () | 106034..106315 | - | 282 | WP_162779865.1 | hypothetical protein | - |
| AKN41_RS24640 () | 106591..107568 | + | 978 | WP_000361614.1 | RepB family plasmid replication initiator protein | - |
| AKN41_RS24645 () | 107853..108593 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| AKN41_RS24650 () | 108714..108902 | - | 189 | WP_032144810.1 | hypothetical protein | - |
| AKN41_RS24655 () | 109264..110433 | + | 1170 | WP_032261183.1 | hypothetical protein | - |
| AKN41_RS24660 () | 110659..110834 | - | 176 | Protein_111 | IS3 family transposase | - |
| AKN41_RS24665 () | 111281..111553 | - | 273 | WP_071589541.1 | Major pilu subunit operon regulatory protein PapB | VF |
| AKN41_RS24670 () | 113041..115011 | + | 1971 | WP_050486091.1 | Hemin receptor | VF |
| AKN41_RS24675 () | 115030..115821 | + | 792 | WP_001620887.1 | DUF4198 domain-containing protein | - |
| AKN41_RS24680 () | 116093..116662 | - | 570 | WP_001620885.1 | hypothetical protein | - |
| AKN41_RS24685 () | 116956..118824 | - | 1869 | WP_096096396.1 | Lipase | VF |
| AKN41_RS25000 () | 118890..123713 | - | 4824 | WP_213862381.1 | hypothetical protein | - |
| AKN41_RS24695 () | 123728..124465 | - | 738 | WP_149032437.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|