MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86650 bp
Accession: NZ_CP012348 Location: 1..86650 Organism: Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 Replicon: plasmid pCFSAN000725_01
Accession: NZ_CP012348 Location: 1..86650 Organism: Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 Replicon: plasmid pCFSAN000725_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEP9120_RS25460 () | 707..928 | - | 222 | WP_144417565.1 | hypothetical protein | - |
| SEEP9120_RS22590 () | 892..1215 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| SEEP9120_RS22595 () | 1451..1885 | - | 435 | WP_001747303.1 | DUF1380 family protein | - |
| SEEP9120_RS22600 () | 1952..2386 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| SEEP9120_RS22605 () | 2882..3646 | - | 765 | WP_001747302.1 | hypothetical protein | - |
| SEEP9120_RS22610 () | 3718..4131 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| SEEP9120_RS22615 () | 4187..4408 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| SEEP9120_RS22620 () | 4408..5088 | - | 681 | WP_001747300.1 | DNA methylase | - |
| SEEP9120_RS22630 () | 5470..5826 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| SEEP9120_RS25135 () | 5819..6289 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| SEEP9120_RS22640 () | 6800..7222 | + | 423 | WP_001746750.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| SEEP9120_RS22645 () | 7222..8496 | + | 1275 | WP_015059462.1 | Y-family DNA polymerase | - |
| SEEP9120_RS22650 () | 8578..9552 | - | 975 | WP_000064276.1 | ParB/RepB/Spo0J family partition protein | - |
| SEEP9120_RS22655 () | 9552..10757 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| SEEP9120_RS22660 () | 11172..12113 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| SEEP9120_RS22665 () | 12145..12711 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| SEEP9120_RS22670 () | 12768..13103 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| SEEP9120_RS22675 () | 13287..13703 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| SEEP9120_RS22680 () | 13789..14904 | - | 1116 | WP_015059463.1 | DNA-binding protein | - |
| SEEP9120_RS22685 () | 15163..15651 | + | 489 | WP_001746759.1 | hypothetical protein | - |
| SEEP9120_RS22690 () | 16306..17046 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| SEEP9120_RS22695 () | 17253..17813 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| SEEP9120_RS22700 () | 17797..19461 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| SEEP9120_RS22705 () | 19394..20419 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| SEEP9120_RS22710 () | 20608..21645 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| SEEP9120_RS22715 () | 22253..23146 | + | 894 | WP_001746579.1 | virulence genes transcriptional activator SpvR | - |
| SEEP9120_RS22720 () | 23320..23484 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| SEEP9120_RS22725 () | 23658..24425 | + | 768 | WP_001541537.1 | virulence protein SpvA | - |
| SEEP9120_RS25715 () | 24388..24555 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| SEEP9120_RS22730 () | 24607..26382 | + | 1776 | WP_001746580.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| SEEP9120_RS22735 () | 26663..27388 | + | 726 | WP_001746581.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| SEEP9120_RS22740 () | 27649..28299 | + | 651 | WP_001746582.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| SEEP9120_RS22745 () | 28426..28853 | - | 428 | Protein_33 | IS200/IS605 family transposase | - |
| SEEP9120_RS22750 () | 28910..29260 | + | 351 | WP_001746584.1 | helix-turn-helix domain-containing protein | - |
| SEEP9120_RS22755 () | 29327..29887 | - | 561 | WP_071785580.1 | inverse autotransporter beta domain-containing protein | - |
| SEEP9120_RS22765 () | 30607..31092 | - | 486 | WP_000905606.1 | membrane protein | - |
| SEEP9120_RS22770 () | 31086..31595 | - | 510 | WP_001576634.1 | CaiF/GrlA family transcriptional regulator | - |
| SEEP9120_RS22775 () | 31599..32312 | - | 714 | Protein_38 | EAL domain-containing protein | - |
| SEEP9120_RS22780 () | 32321..33103 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| SEEP9120_RS22785 () | 33138..33659 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| SEEP9120_RS22790 () | 33656..33946 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| SEEP9120_RS22795 () | 33948..34252 | - | 305 | Protein_42 | type II toxin-antitoxin system toxin CcdB | - |
| SEEP9120_RS22800 () | 34254..34472 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| SEEP9120_RS22805 () | 35217..35447 | + | 231 | WP_001261283.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| SEEP9120_RS22810 () | 35444..35872 | + | 429 | WP_001746752.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| SEEP9120_RS22815 () | 36442..37290 | - | 849 | WP_000175397.1 | SdiA-regulated domain-containing protein | - |
| SEEP9120_RS25565 () | 37316..37477 | - | 162 | WP_001816720.1 | hypothetical protein | - |
| SEEP9120_RS22820 () | 37738..37950 | - | 213 | WP_000063791.1 | hypothetical protein | - |
| SEEP9120_RS22825 () | 38023..38607 | - | 585 | WP_024138406.1 | hypothetical protein | - |
| SEEP9120_RS24595 () | 38732..39422 | - | 691 | Protein_50 | fimbrial protein | - |
| SEEP9120_RS22835 () | 39422..39697 | - | 276 | WP_001020576.1 | hypothetical protein | - |
| SEEP9120_RS22840 () | 39684..40448 | - | 765 | WP_001746754.1 | minor fimbrial protein | - |
| SEEP9120_RS22845 () | 40476..41273 | - | 798 | WP_000704722.1 | F4 (K88) fimbria minor subunit FaeH | - |
| SEEP9120_RS22850 () | 41509..41781 | - | 273 | WP_001178538.1 | hypothetical protein | - |
| SEEP9120_RS22855 () | 43240..43899 | + | 660 | WP_001575507.1 | hypothetical protein | - |
| SEEP9120_RS22860 () | 43935..44730 | + | 796 | Protein_56 | hypothetical protein | - |
| SEEP9120_RS25475 () | 45025..45222 | + | 198 | WP_001675602.1 | transposase | - |
| SEEP9120_RS25605 () | 45377..45591 | + | 215 | Protein_58 | IS66 family insertion sequence element accessory protein TnpB | - |
| SEEP9120_RS24605 () | 45583..45987 | + | 405 | Protein_59 | transposase | - |
| SEEP9120_RS22880 () | 46782..47663 | - | 882 | WP_001746973.1 | incFII family plasmid replication initiator RepA | - |
| SEEP9120_RS22885 () | 47644..47721 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| SEEP9120_RS22895 () | 47969..48235 | - | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| SEEP9120_RS22900 () | 48414..48856 | - | 443 | Protein_63 | phospholipase | - |
| SEEP9120_RS22905 () | 49022..49474 | - | 453 | WP_015059445.1 | hypothetical protein | - |
| SEEP9120_RS22910 () | 49591..50154 | - | 564 | WP_000129019.1 | fertility inhibition protein FinO | - |
| SEEP9120_RS22915 () | 50209..50949 | - | 741 | WP_000177627.1 | conjugal transfer pilus acetylase TraX | - |
| SEEP9120_RS22920 () | 50969..56227 | - | 5259 | WP_015059446.1 | conjugative transfer relaxase/helicase TraI | - |
| SEEP9120_RS22925 () | 56227..58461 | - | 2235 | WP_001747308.1 | type IV conjugative transfer system coupling protein TraD | - |
| SEEP9120_RS22930 () | 58838..59569 | - | 732 | WP_000850404.1 | complement resistance protein TraT | - |
| SEEP9120_RS22935 () | 59815..60297 | - | 483 | WP_000787664.1 | hypothetical protein | - |
| SEEP9120_RS22940 () | 60319..62805 | - | 2487 | WP_015059448.1 | F-type conjugal transfer protein TraH | - |
| SEEP9120_RS22945 () | 62795..63343 | - | 549 | WP_000055842.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| SEEP9120_RS22950 () | 63330..63623 | - | 294 | WP_001233883.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SEEP9120_RS22955 () | 63837..64580 | - | 744 | WP_001746545.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| SEEP9120_RS22960 () | 64593..64808 | - | 216 | WP_001746544.1 | conjugal transfer protein TrbE | - |
| SEEP9120_RS22965 () | 64819..65295 | - | 477 | WP_001746543.1 | hypothetical protein | - |
| SEEP9120_RS22970 () | 65306..67132 | - | 1827 | WP_001746541.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| SEEP9120_RS22975 () | 67129..67548 | - | 420 | WP_001229398.1 | HNH endonuclease | - |
| SEEP9120_RS22980 () | 67585..68223 | - | 639 | WP_001576661.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| SEEP9120_RS22985 () | 68208..68516 | - | 309 | WP_001576663.1 | hypothetical protein | - |
| SEEP9120_RS22990 () | 68535..69527 | - | 993 | WP_015059450.1 | conjugal transfer pilus assembly protein TraU | - |
| SEEP9120_RS22995 () | 69524..70156 | - | 633 | WP_015059451.1 | type-F conjugative transfer system protein TraW | - |
| SEEP9120_RS23000 () | 70153..70539 | - | 387 | WP_000102756.1 | type-F conjugative transfer system protein TrbI | - |
| SEEP9120_RS23005 () | 70514..73161 | - | 2648 | Protein_84 | type IV secretion system protein TraC | - |
| SEEP9120_RS23010 () | 73177..73560 | - | 384 | WP_000870325.1 | hypothetical protein | - |
| SEEP9120_RS23015 () | 73557..74024 | - | 468 | WP_000549559.1 | hypothetical protein | - |
| SEEP9120_RS23020 () | 74017..74238 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| SEEP9120_RS23025 () | 74373..74888 | - | 516 | WP_001746951.1 | type IV conjugative transfer system lipoprotein TraV | - |
| SEEP9120_RS23030 () | 74885..75109 | - | 225 | WP_001746950.1 | DUF2689 domain-containing protein | - |
| SEEP9120_RS23035 () | 75087..75683 | - | 597 | WP_000527898.1 | conjugal transfer protein TraP | - |
| SEEP9120_RS23040 () | 75673..77094 | - | 1422 | WP_000146698.1 | conjugal transfer protein TraB | - |
| SEEP9120_RS23045 () | 77094..77834 | - | 741 | WP_015059453.1 | type-F conjugative transfer system secretin TraK | - |
| SEEP9120_RS23050 () | 77821..78387 | - | 567 | WP_000399760.1 | type IV conjugative transfer system protein TraE | - |
| SEEP9120_RS23055 () | 78409..78720 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| SEEP9120_RS23060 () | 78735..79097 | - | 363 | WP_001274202.1 | type IV conjugative transfer system pilin TraA | - |
| SEEP9120_RS24615 () | 79139..79534 | - | 396 | WP_001746564.1 | conjugal transfer relaxosome protein TraY | - |
| SEEP9120_RS23070 () | 79633..80322 | - | 690 | WP_001746563.1 | conjugal transfer transcriptional regulator TraJ | - |
| SEEP9120_RS23075 () | 80517..80897 | - | 381 | WP_001151568.1 | relaxosome protein TraM | - |
| SEEP9120_RS23080 () | 81320..81790 | + | 471 | WP_024134052.1 | transglycosylase SLT domain-containing protein | - |
| SEEP9120_RS25720 () | 82101..82919 | - | 819 | Protein_100 | DUF945 domain-containing protein | - |
| SEEP9120_RS25610 () | 83022..83180 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| SEEP9120_RS23095 () | 83429..84085 | - | 657 | Protein_102 | plasmid SOS inhibition protein A | - |
| SEEP9120_RS23100 () | 84022..84210 | - | 189 | WP_001746557.1 | hypothetical protein | - |
| SEEP9120_RS23105 () | 84253..86236 | - | 1984 | Protein_104 | ParB/RepB/Spo0J family partition protein | - |
| SEEP9120_RS24625 () | 86305..86445 | - | 141 | Protein_105 | DUF905 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|