MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 306080 bp
Accession: NZ_CP012325 Location: 2023382..2329461 Organism: Clostridioides difficile strain DSM 29020 Replicon: chromosome
Accession: NZ_CP012325 Location: 2023382..2329461 Organism: Clostridioides difficile strain DSM 29020 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDIF29020_RS09895 () | 2022768..2023115 | + | 348 | WP_003423929.1 | cupin domain-containing protein | - |
| CDIF29020_RS09900 () | 2023264..2024337 | - | 1074 | WP_118701643.1 | ABC transporter substrate-binding protein | - |
| CDIF29020_RS09905 () | 2024693..2025430 | + | 738 | WP_003423934.1 | class I SAM-dependent methyltransferase | - |
| CDIF29020_RS09910 () | 2025555..2026046 | - | 492 | WP_003423936.1 | prolyl-tRNA synthetase associated domain-containing protein | - |
| CDIF29020_RS09915 () | 2026395..2026778 | + | 384 | WP_003423938.1 | hypothetical protein | - |
| CDIF29020_RS09920 () | 2027284..2027667 | + | 384 | WP_003423940.1 | YtxH domain-containing protein | - |
| CDIF29020_RS09925 () | 2027669..2028019 | + | 351 | WP_003423942.1 | hypothetical protein | - |
| CDIF29020_RS09930 () | 2028119..2028577 | - | 459 | WP_003423944.1 | hypothetical protein | - |
| CDIF29020_RS09935 () | 2028625..2029413 | - | 789 | WP_003423946.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CDIF29020_RS09940 () | 2029552..2029989 | - | 438 | WP_009905609.1 | cytidine/deoxycytidylate deaminase family protein | - |
| CDIF29020_RS09950 () | 2030869..2030955 | + | 87 | Protein_1806 | transposase | - |
| CDIF29020_RS09960 () | 2031402..2031911 | + | 510 | WP_003423953.1 | hypothetical protein | VF |
| CDIF29020_RS09970 () | 2032302..2032838 | + | 537 | WP_003423954.1 | signal peptidase II | - |
| CDIF29020_RS09980 () | 2033596..2034216 | + | 621 | WP_003423956.1 | Crp/Fnr family transcriptional regulator | - |
| CDIF29020_RS09985 () | 2034372..2035154 | + | 783 | WP_003423957.1 | aminoglycoside 6-adenylyltransferase | - |
| CDIF29020_RS09990 () | 2035279..2036205 | + | 927 | WP_003423958.1 | hypothetical protein | - |
| CDIF29020_RS09995 () | 2036219..2036725 | + | 507 | WP_003423959.1 | GNAT family N-acetyltransferase | - |
| CDIF29020_RS10000 () | 2036794..2037455 | + | 662 | Protein_1813 | Transposase from transposon Tn916 ; Integrase | Integrase |
| CDIF29020_RS10005 () | 2037746..2038531 | + | 786 | WP_002587860.1 | Sporulation initiation inhibitor protein Soj | VF |
| CDIF29020_RS10010 () | 2038521..2039450 | + | 930 | WP_002587861.1 | ParB/RepB/Spo0J family partition protein | - |
| CDIF29020_RS10015 () | 2039428..2039739 | + | 312 | WP_002587862.1 | hypothetical protein | - |
| CDIF29020_RS10020 () | 2039955..2040353 | + | 399 | WP_002587863.1 | hypothetical protein | - |
| CDIF29020_RS10025 () | 2040368..2040766 | + | 399 | WP_002587864.1 | single-stranded DNA-binding protein | - |
| CDIF29020_RS10030 () | 2040779..2041171 | + | 393 | WP_002587865.1 | hypothetical protein | - |
| CDIF29020_RS10035 () | 2041164..2042087 | + | 924 | WP_002587866.1 | replication initiator protein A | - |
| CDIF29020_RS10040 () | 2042101..2042913 | + | 813 | WP_002587867.1 | replication initiator protein A | - |
| CDIF29020_RS10045 () | 2042910..2043707 | + | 798 | WP_002587868.1 | IS21 family transposase ISGau7 | Transposase |
| CDIF29020_RS10050 () | 2043790..2044281 | + | 492 | WP_002587869.1 | PcfB family protein | - |
| CDIF29020_RS10055 () | 2044302..2046203 | + | 1902 | WP_086022146.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CDIF29020_RS10060 () | 2046278..2046493 | + | 216 | WP_002587871.1 | Maff2 family protein | - |
| CDIF29020_RS10065 () | 2046505..2047374 | + | 870 | WP_032511037.1 | hypothetical protein | - |
| CDIF29020_RS10070 () | 2047403..2047864 | + | 462 | WP_022615249.1 | PrgI family protein | - |
| CDIF29020_RS10075 () | 2047749..2049986 | + | 2238 | WP_002587873.1 | ATP-binding protein | - |
| CDIF29020_RS10080 () | 2050719..2052602 | + | 1884 | WP_004452886.1 | group II intron reverse transcriptase/maturase | - |
| CDIF29020_RS10095 () | 2053105..2055885 | + | 2781 | WP_002585008.1 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS | VF |
| CDIF29020_RS10100 () | 2055923..2056243 | + | 321 | WP_002585007.1 | DUF4315 family protein | - |
| CDIF29020_RS10105 () | 2056182..2057561 | + | 1380 | WP_022615255.1 | DUF4366 domain-containing protein | - |
| CDIF29020_RS10110 () | 2057580..2058140 | + | 561 | WP_032511075.1 | adenine methyltransferase | - |
| CDIF29020_RS10115 () | 2058142..2060214 | + | 2073 | WP_002585004.1 | DNA topoisomerase 3 | - |
| CDIF29020_RS10120 () | 2060280..2066648 | + | 6369 | WP_002585003.1 | LPXTG cell wall anchor domain-containing protein | - |
| CDIF29020_RS19620 () | 2066727..2066867 | + | 141 | WP_002585002.1 | hypothetical protein | - |
| CDIF29020_RS10125 () | 2066874..2067962 | + | 1089 | WP_002585001.1 | hypothetical protein | - |
| CDIF29020_RS10130 () | 2068023..2068340 | + | 318 | WP_004452875.1 | hypothetical protein | - |
| CDIF29020_RS10135 () | 2068461..2069102 | + | 642 | WP_002584998.1 | JAB domain-containing protein | - |
| CDIF29020_RS10140 () | 2069120..2076799 | + | 7680 | WP_044519470.1 | DEAD/DEAH box helicase family protein | - |
| CDIF29020_RS10145 () | 2077191..2078342 | - | 1152 | WP_004452854.1 | IS91 family transposase ISMno24 | Transposase |
| CDIF29020_RS10150 () | 2078342..2079184 | - | 843 | WP_004452852.1 | IS91 family transposase ISAzo26 | Transposase |
| CDIF29020_RS10155 () | 2079924..2081384 | + | 1461 | WP_004452851.1 | Lsa family ABC-F type ribosomal protection protein | - |
| CDIF29020_RS10160 () | 2081566..2082330 | + | 765 | WP_002584993.1 | hypothetical protein | VF |
| CDIF29020_RS10165 () | 2082344..2085445 | + | 3102 | WP_002584992.1 | DUF4316 domain-containing protein | - |
| CDIF29020_RS10170 () | 2085586..2086413 | + | 828 | WP_002584991.1 | WYL domain-containing protein | - |
| CDIF29020_RS10175 () | 2086586..2086948 | + | 363 | WP_002584990.1 | hypothetical protein | - |
| CDIF29020_RS10180 () | 2087159..2088079 | + | 921 | WP_002584989.1 | helix-turn-helix domain-containing protein | - |
| CDIF29020_RS10185 () | 2088094..2088318 | + | 225 | WP_002584988.1 | DUF5348 domain-containing protein | - |
| CDIF29020_RS10195 () | 2088838..2089704 | - | 867 | WP_001255868.1 | Aminoglycoside 6-adenylyltransferase | ARG |
| CDIF29020_RS10200 () | 2089910..2090539 | - | 630 | WP_002584987.1 | alpha/beta hydrolase | - |
| CDIF29020_RS10205 () | 2090565..2091365 | - | 801 | WP_002584986.1 | helix-turn-helix domain-containing protein | - |
| CDIF29020_RS10210 () | 2091680..2092093 | + | 414 | WP_002584985.1 | cysteine-rich VLP domain-containing protein | - |
| CDIF29020_RS10215 () | 2092205..2092600 | + | 396 | WP_002584984.1 | replication initiator protein A | - |
| CDIF29020_RS10220 () | 2092785..2093729 | + | 945 | WP_002584983.1 | plasmid recombination protein | - |
| CDIF29020_RS10225 () | 2093802..2093996 | + | 195 | WP_002334813.1 | hypothetical protein | - |
| CDIF29020_RS10230 () | 2094142..2095719 | + | 1578 | WP_077717623.1 | IS607 family transposase ISCARN56 | Transposase |
| CDIF29020_RS10240 () | 2096370..2097965 | + | 1596 | WP_002584981.1 | MobA/MobL family protein | - |
| CDIF29020_RS10245 () | 2098034..2098651 | + | 618 | WP_022615270.1 | DNA primase | - |
| CDIF29020_RS10250 () | 2098584..2099933 | + | 1350 | WP_002584979.1 | virulence-associated E family protein | - |
| CDIF29020_RS10260 () | 2100187..2100354 | + | 168 | WP_002584978.1 | transposon-encoded TnpW family protein | - |
| CDIF29020_RS10265 () | 2100393..2101223 | + | 831 | Protein_1862 | TraM recognition domain-containing protein | - |
| CDIF29020_RS10270 () | 2101465..2101605 | + | 141 | WP_002584976.1 | membrane protein | - |
| CDIF29020_RS10275 () | 2101748..2102968 | - | 1221 | WP_002578914.1 | hypothetical protein | ARG |
| CDIF29020_RS10280 () | 2103389..2103787 | + | 399 | WP_002584975.1 | plasmid mobilization relaxosome protein MobC | - |
| CDIF29020_RS10285 () | 2103759..2105384 | + | 1626 | WP_002584974.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CDIF29020_RS10290 () | 2105374..2105760 | + | 387 | WP_004452819.1 | cysteine-rich VLP domain-containing protein | - |
| CDIF29020_RS10300 () | 2105873..2106289 | + | 417 | Protein_1868 | phage replisome organizer N-terminal domain-containing protein | - |
| CDIF29020_RS10305 () | 2106289..2107677 | + | 1389 | Protein_1869 | hypothetical protein ; Integrase | Integrase |
| CDIF29020_RS10310 () | 2107756..2107971 | + | 216 | WP_002584971.1 | transposon-encoded TnpW family protein | - |
| CDIF29020_RS10315 () | 2108106..2108408 | + | 303 | WP_002584970.1 | hypothetical protein | - |
| CDIF29020_RS10320 () | 2108577..2109410 | + | 834 | WP_002584969.1 | methyltransferase domain-containing protein | - |
| CDIF29020_RS10325 () | 2109532..2109837 | + | 306 | WP_002584968.1 | DUF3847 domain-containing protein | - |
| CDIF29020_RS10330 () | 2110077..2111591 | + | 1515 | WP_131743550.1 | MobA/MobL family protein | - |
| CDIF29020_RS10335 () | 2111606..2113507 | + | 1902 | WP_002584966.1 | AAA family ATPase | - |
| CDIF29020_RS10345 () | 2113897..2114163 | + | 267 | WP_002584965.1 | DUF4315 family protein | - |
| CDIF29020_RS10350 () | 2114153..2114902 | + | 750 | WP_002584964.1 | DUF4366 domain-containing protein | - |
| CDIF29020_RS10355 () | 2114899..2116974 | + | 2076 | WP_002584963.1 | type IA DNA topoisomerase | - |
| CDIF29020_RS10360 () | 2116971..2117339 | + | 369 | WP_002584962.1 | cysteine-rich VLP domain-containing protein | - |
| CDIF29020_RS10365 () | 2117465..2120812 | + | 3348 | WP_002584961.1 | antirestriction protein ArdA | - |
| CDIF29020_RS10370 () | 2120817..2121026 | + | 210 | WP_002584960.1 | transposon-transfer assisting family protein | - |
| CDIF29020_RS10375 () | 2121228..2122562 | - | 1335 | WP_002584959.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CDIF29020_RS10380 () | 2122523..2122852 | - | 330 | WP_002584958.1 | plasmid mobilization relaxosome protein MobC | - |
| CDIF29020_RS10385 () | 2123054..2123410 | - | 357 | WP_002584957.1 | helix-turn-helix transcriptional regulator | - |
| CDIF29020_RS10390 () | 2123767..2123952 | + | 186 | WP_003431289.1 | hypothetical protein | - |
| CDIF29020_RS10395 () | 2123969..2124952 | + | 984 | WP_002584956.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| CDIF29020_RS10400 () | 2125428..2126186 | + | 759 | Protein_1887 | hypothetical protein ; Integrase | Integrase |
| CDIF29020_RS10405 () | 2126241..2127608 | - | 1368 | WP_002584954.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CDIF29020_RS10410 () | 2127575..2127898 | - | 324 | WP_002584953.1 | plasmid mobilization relaxosome protein MobC | - |
| CDIF29020_RS10415 () | 2128156..2128515 | + | 360 | WP_004452794.1 | MmcQ/YjbR family DNA-binding protein | - |
| CDIF29020_RS10420 () | 2128561..2129031 | + | 471 | WP_004452793.1 | hypothetical protein | - |
| CDIF29020_RS10425 () | 2129123..2129932 | + | 810 | WP_004452792.1 | hypothetical protein | - |
| CDIF29020_RS10430 () | 2130059..2130289 | - | 231 | WP_004452791.1 | helix-turn-helix domain-containing protein | - |
| CDIF29020_RS10435 () | 2130357..2131097 | - | 741 | WP_004452790.1 | XRE family transcriptional regulator | - |
| CDIF29020_RS10440 () | 2131290..2132537 | + | 1248 | WP_032511019.1 | DNA polymerase IV | - |
| CDIF29020_RS10445 () | 2132537..2132764 | + | 228 | WP_004452786.1 | HTH domain-containing protein | - |
| CDIF29020_RS10450 () | 2132777..2133016 | + | 240 | WP_004452785.1 | hypothetical protein | - |
| CDIF29020_RS10455 () | 2133247..2133819 | + | 573 | WP_032511050.1 | hypothetical protein | - |
| CDIF29020_RS10460 () | 2133829..2134194 | + | 366 | WP_032511047.1 | hypothetical protein | - |
| CDIF29020_RS10465 () | 2134356..2134670 | + | 315 | WP_002584939.1 | helix-turn-helix domain-containing protein | - |
| CDIF29020_RS10470 () | 2134812..2135030 | + | 219 | WP_004452780.1 | hypothetical protein | - |
| CDIF29020_RS10475 () | 2135150..2135458 | + | 309 | WP_170875421.1 | hypothetical protein | - |
| CDIF29020_RS10480 () | 2135822..2136295 | + | 474 | WP_004452778.1 | sigma-70 family RNA polymerase sigma factor | - |
| CDIF29020_RS10485 () | 2136844..2137227 | + | 384 | WP_004452777.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CDIF29020_RS10490 () | 2137208..2137456 | + | 249 | WP_004452776.1 | hypothetical protein | - |
| CDIF29020_RS10495 () | 2137565..2139256 | + | 1692 | WP_004452774.1 | hypothetical protein ; Integrase | Integrase |
| CDIF29020_RS10500 () | 2139258..2140949 | + | 1692 | WP_022615281.1 | IS607 family transposase ISTsi1 | Transposase |
| CDIF29020_RS10505 () | 2140946..2142523 | + | 1578 | WP_004452771.1 | hypothetical protein ; Integrase | Integrase |
| CDIF29020_RS10510 () | 2142580..2142813 | + | 234 | WP_069972670.1 | tyrosine-type recombinase/integrase | - |
| CDIF29020_RS10520 () | 2143071..2143871 | - | 801 | WP_003423966.1 | ABC transporter permease | - |
| CDIF29020_RS10530 () | 2144066..2145664 | - | 1599 | WP_003423968.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| CDIF29020_RS10535 () | 2145992..2146168 | + | 177 | WP_003423970.1 | hypothetical protein | - |
| CDIF29020_RS10540 () | 2146342..2147472 | + | 1131 | WP_003423972.1 | Aldehyde-alcohol dehydrogenase | VF |
| CDIF29020_RS10545 () | 2147713..2148063 | + | 351 | WP_003423973.1 | BMC domain-containing protein | - |
| CDIF29020_RS10550 () | 2148071..2148520 | + | 450 | WP_003423975.1 | EutP/PduV family microcompartment system protein | - |
| CDIF29020_RS10555 () | 2148623..2149198 | + | 576 | WP_003423977.1 | putative transcriptional regulatory protein pdtaR | VF |
| CDIF29020_RS10560 () | 2149191..2150600 | + | 1410 | WP_003423979.1 | histidine kinase N-terminal domain-containing protein | - |
| CDIF29020_RS10565 () | 2150784..2152217 | + | 1434 | WP_003423981.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| CDIF29020_RS10570 () | 2152235..2153599 | + | 1365 | WP_003423983.1 | ethanolamine ammonia-lyase subunit EutB | - |
| CDIF29020_RS10575 () | 2153612..2154493 | + | 882 | WP_003423985.1 | ethanolamine ammonia-lyase subunit EutC | - |
| CDIF29020_RS10580 () | 2154513..2155166 | + | 654 | WP_003423987.1 | ethanolamine utilization microcompartment protein EutL | - |
| CDIF29020_RS10585 () | 2155177..2155881 | + | 705 | WP_003423989.1 | BMC domain-containing protein | - |
| CDIF29020_RS10590 () | 2155884..2157353 | + | 1470 | WP_003423990.1 | Aldehyde-alcohol dehydrogenase | VF |
| CDIF29020_RS10595 () | 2157439..2157726 | + | 288 | WP_003423991.1 | ethanolamine utilization microcompartment protein EutM | - |
| CDIF29020_RS10600 () | 2157853..2158614 | + | 762 | WP_003423992.1 | cob(I)yrinic acid a,c-diamide adenosyltransferase | - |
| CDIF29020_RS10605 () | 2158627..2159256 | + | 630 | WP_003423993.1 | phosphate propanoyltransferase | - |
| CDIF29020_RS10610 () | 2159298..2160023 | + | 726 | WP_003423994.1 | TIGR02536 family ethanolamine utilization protein | - |
| CDIF29020_RS10615 () | 2160036..2160308 | + | 273 | WP_003423995.1 | EutN/CcmL family microcompartment protein | - |
| CDIF29020_RS10620 () | 2160301..2160852 | + | 552 | WP_003423996.1 | BMC domain-containing protein | - |
| CDIF29020_RS10625 () | 2160864..2161955 | + | 1092 | WP_032510209.1 | ethanolamine utilization protein EutH | - |
| CDIF29020_RS10630 () | 2161957..2162430 | + | 474 | WP_009893336.1 | DUF861 domain-containing protein | - |
| CDIF29020_RS10635 () | 2162550..2163599 | - | 1050 | WP_004452764.1 | HTH-type transcriptional activator RhaS | VF |
| CDIF29020_RS10640 () | 2163772..2165139 | + | 1368 | WP_003424003.1 | MFS transporter | - |
| CDIF29020_RS10645 () | 2165170..2166771 | + | 1602 | WP_003424006.1 | family 78 glycoside hydrolase catalytic domain | - |
| CDIF29020_RS10650 () | 2166918..2167517 | - | 600 | WP_003424009.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
| CDIF29020_RS10655 () | 2167687..2169045 | + | 1359 | WP_003424011.1 | hypothetical protein | - |
| CDIF29020_RS10660 () | 2169038..2169670 | + | 633 | WP_003424014.1 | Outer membrane lipoprotein Omp16 | VF |
| CDIF29020_RS10665 () | 2169999..2171156 | + | 1158 | WP_003424024.1 | MBL fold metallo-hydrolase | - |
| CDIF29020_RS10670 () | 2171275..2171910 | - | 636 | WP_009905624.1 | transcriptional repressor LexA | - |
| CDIF29020_RS10675 () | 2172014..2173141 | - | 1128 | WP_003424031.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CDIF29020_RS10680 () | 2173464..2174309 | - | 846 | WP_003424033.1 | hypothetical protein | - |
| CDIF29020_RS10685 () | 2174338..2174709 | - | 372 | WP_003424036.1 | ACT domain-containing protein | - |
| CDIF29020_RS10690 () | 2174862..2175122 | - | 261 | WP_003424039.1 | stage V sporulation protein S | - |
| CDIF29020_RS10695 () | 2175311..2176255 | - | 945 | WP_003424062.1 | acetyl-CoA carboxylase carboxyltransferase subunit alpha | - |
| CDIF29020_RS10700 () | 2176276..2177130 | - | 855 | WP_003424064.1 | acetyl-CoA carboxylase, carboxyltransferase subunit beta | - |
| CDIF29020_RS10705 () | 2177145..2178506 | - | 1362 | WP_003424066.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| CDIF29020_RS10710 () | 2178522..2178974 | - | 453 | WP_003424068.1 | acetyl-CoA carboxylase biotin carboxyl carrier protein | - |
| CDIF29020_RS10715 () | 2179244..2179690 | - | 447 | WP_003424070.1 | hypothetical protein | - |
| CDIF29020_RS10720 () | 2179965..2180243 | + | 279 | WP_003424072.1 | hypothetical protein | - |
| CDIF29020_RS10725 () | 2180372..2181118 | - | 747 | WP_003424079.1 | hypothetical protein | - |
| CDIF29020_RS10730 () | 2181247..2181891 | - | 645 | WP_009889910.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| CDIF29020_RS10735 () | 2182029..2182349 | - | 321 | WP_003424083.1 | hypothetical protein | - |
| CDIF29020_RS10740 () | 2182668..2183354 | - | 687 | WP_009905631.1 | putative ABC transporter ATP-binding protein YknY | VF |
| CDIF29020_RS10745 () | 2183369..2185846 | - | 2478 | WP_003424092.1 | FtsX-like permease family protein | - |
| CDIF29020_RS10750 () | 2186066..2187463 | - | 1398 | WP_003424094.1 | HAMP domain-containing histidine kinase | - |
| CDIF29020_RS10755 () | 2187962..2188822 | + | 861 | WP_003424097.1 | YitT family protein | - |
| CDIF29020_RS10760 () | 2189063..2189620 | - | 558 | WP_009905633.1 | GNAT family N-acetyltransferase | - |
| CDIF29020_RS10765 () | 2189810..2190697 | - | 888 | WP_003424101.1 | LysR family transcriptional regulator | - |
| CDIF29020_RS10770 () | 2190816..2192015 | + | 1200 | WP_003424103.1 | coenzyme F420-0:L-glutamate ligase | - |
| CDIF29020_RS10775 () | 2192220..2194775 | - | 2556 | WP_003424110.1 | FtsX-like permease family protein | - |
| CDIF29020_RS10780 () | 2194772..2195458 | - | 687 | WP_003424112.1 | ABC transporter ATP-binding protein YxdL | VF |
| CDIF29020_RS10785 () | 2195533..2196441 | - | 909 | WP_003424113.1 | HAMP domain-containing histidine kinase | - |
| CDIF29020_RS10790 () | 2196443..2197114 | - | 672 | WP_003424114.1 | Sensory transduction protein regX3 | VF |
| CDIF29020_RS10795 () | 2197376..2198440 | + | 1065 | WP_003424115.1 | 4Fe-4S ferredoxin | - |
| CDIF29020_RS10800 () | 2198598..2199284 | + | 687 | WP_003424116.1 | Transcriptional regulatory protein WalR | VF |
| CDIF29020_RS10805 () | 2199274..2200305 | + | 1032 | WP_009905636.1 | HAMP domain-containing histidine kinase | - |
| CDIF29020_RS10810 () | 2200387..2201052 | + | 666 | WP_003424118.1 | Bacitracin export ATP-binding protein BceA | VF |
| CDIF29020_RS10815 () | 2201065..2203482 | + | 2418 | WP_003424119.1 | ABC transporter permease | - |
| CDIF29020_RS10820 () | 2203663..2204454 | - | 792 | WP_003424121.1 | class I SAM-dependent methyltransferase | - |
| CDIF29020_RS10825 () | 2204487..2205074 | - | 588 | WP_003424122.1 | TetR/AcrR family transcriptional regulator | - |
| CDIF29020_RS10830 () | 2205252..2206643 | - | 1392 | WP_003424124.1 | hypothetical protein | - |
| CDIF29020_RS10835 () | 2206810..2207019 | - | 210 | Protein_1972 | acyl-CoA thioesterase | - |
| CDIF29020_RS10840 () | 2207201..2208181 | + | 981 | WP_003424128.1 | CPBP family intramembrane metalloprotease | - |
| CDIF29020_RS10845 () | 2208397..2209272 | - | 876 | WP_003424130.1 | hypothetical protein | - |
| CDIF29020_RS10850 () | 2209454..2210140 | - | 687 | WP_003424132.1 | DUF554 domain-containing protein | - |
| CDIF29020_RS10855 () | 2210189..2210728 | - | 540 | WP_003424133.1 | prolyl-tRNA synthetase associated domain-containing protein | - |
| CDIF29020_RS10860 () | 2210774..2211406 | - | 633 | WP_003424134.1 | cyclase family protein | - |
| CDIF29020_RS10865 () | 2211493..2212575 | - | 1083 | WP_003424135.1 | SIR2 family protein | - |
| CDIF29020_RS10870 () | 2212708..2214054 | - | 1347 | WP_003424136.1 | M20 family metallopeptidase | - |
| CDIF29020_RS10875 () | 2214123..2215403 | - | 1281 | WP_003424137.1 | methionine gamma-lyase family protein | - |
| CDIF29020_RS10880 () | 2215530..2215787 | - | 258 | WP_003424138.1 | RNA chaperone Hfq | - |
| CDIF29020_RS10885 () | 2215901..2216836 | - | 936 | WP_009905646.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| CDIF29020_RS10890 () | 2216857..2218821 | - | 1965 | WP_003424140.1 | DNA mismatch repair endonuclease MutL | - |
| CDIF29020_RS10895 () | 2218832..2221675 | - | 2844 | WP_003424141.1 | DNA mismatch repair protein MutS | - |
| CDIF29020_RS10900 () | 2221838..2222572 | - | 735 | WP_003424142.1 | ABC transporter ATP-binding protein | - |
| CDIF29020_RS10905 () | 2222541..2223554 | - | 1014 | WP_003424143.1 | ABC transporter substrate-binding protein | - |
| CDIF29020_RS10910 () | 2223576..2224346 | - | 771 | WP_003424144.1 | ABC transporter permease | - |
| CDIF29020_RS10915 () | 2224321..2224611 | - | 291 | WP_003424145.1 | MTH1187 family thiamine-binding protein | - |
| CDIF29020_RS10920 () | 2224967..2225101 | - | 135 | WP_003424146.1 | hypothetical protein | - |
| CDIF29020_RS19625 () | 2225116..2225289 | - | 174 | WP_003424147.1 | hypothetical protein | - |
| CDIF29020_RS10925 () | 2225953..2226129 | + | 177 | WP_003428796.1 | hypothetical protein | - |
| CDIF29020_RS10930 () | 2226244..2226600 | - | 357 | WP_003424148.1 | helix-turn-helix transcriptional regulator | - |
| CDIF29020_RS10935 () | 2226856..2227776 | + | 921 | WP_003424149.1 | PhzF family isomerase | - |
| CDIF29020_RS10940 () | 2228001..2228612 | + | 612 | WP_003424150.1 | CoA pyrophosphatase | - |
| CDIF29020_RS10945 () | 2228917..2229255 | + | 339 | WP_009905652.1 | DUF3784 domain-containing protein | - |
| CDIF29020_RS10955 () | 2229663..2231099 | - | 1437 | WP_003424153.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| CDIF29020_RS10960 () | 2231350..2232786 | - | 1437 | WP_009905653.1 | N-acetylmuramoyl-L-alanine amidase LytC | VF |
| CDIF29020_RS10970 () | 2233615..2234166 | - | 552 | WP_003424155.1 | tryptophan transporter | - |
| CDIF29020_RS10975 () | 2235010..2235417 | - | 408 | WP_029158138.1 | hypothetical protein | - |
| CDIF29020_RS10980 () | 2235755..2236240 | - | 486 | WP_009905654.1 | SH3 domain-containing protein | - |
| CDIF29020_RS10985 () | 2236766..2237104 | - | 339 | WP_003424159.1 | hypothetical protein | - |
| CDIF29020_RS10990 () | 2237091..2237318 | - | 228 | WP_003424160.1 | helix-turn-helix domain-containing protein | - |
| CDIF29020_RS10995 () | 2237655..2237891 | + | 237 | WP_003424162.1 | hypothetical protein | - |
| CDIF29020_RS11000 () | 2238168..2238452 | - | 285 | WP_003424163.1 | hypothetical protein | - |
| CDIF29020_RS11005 () | 2238775..2239032 | - | 258 | WP_003424164.1 | hypothetical protein | - |
| CDIF29020_RS11010 () | 2239171..2239542 | - | 372 | WP_003424165.1 | hypothetical protein | - |
| CDIF29020_RS11015 () | 2239985..2240557 | - | 573 | WP_003424166.1 | hypothetical protein | - |
| CDIF29020_RS11030 () | 2241543..2241737 | - | 195 | WP_003424168.1 | hypothetical protein | - |
| CDIF29020_RS11040 () | 2242274..2242654 | - | 381 | WP_003424180.1 | hypothetical protein | - |
| CDIF29020_RS11045 () | 2242647..2242904 | - | 258 | WP_003424182.1 | hypothetical protein | - |
| CDIF29020_RS11050 () | 2242891..2243124 | - | 234 | WP_003424184.1 | hypothetical protein | - |
| CDIF29020_RS11055 () | 2243312..2243500 | + | 189 | WP_003424185.1 | helix-turn-helix transcriptional regulator | - |
| - () | 2247445..2247545 | + | 101 | NuclAT_0 | - | Antitoxin Detail |
| CDIF29020_RS11060 () | 2247489..2247641 | - | 153 | WP_003424190.1 | hypothetical protein | Toxin Detail |
| CDIF29020_RS11070 () | 2248469..2249014 | + | 546 | WP_077699404.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| CDIF29020_RS11075 () | 2249559..2250404 | + | 846 | WP_003424194.1 | DUF4878 domain-containing protein | - |
| CDIF29020_RS11080 () | 2250628..2250792 | - | 165 | WP_003424195.1 | hypothetical protein | - |
| CDIF29020_RS11085 () | 2251324..2251655 | - | 332 | Protein_2017 | carboxymuconolactone decarboxylase family protein | - |
| CDIF29020_RS11090 () | 2251915..2252556 | - | 642 | WP_003424198.1 | SdpI family protein | - |
| CDIF29020_RS11095 () | 2252537..2252830 | - | 294 | WP_009889969.1 | autorepressor SdpR family transcription factor | - |
| CDIF29020_RS11100 () | 2253224..2253283 | + | 60 | WP_071585685.1 | hypothetical protein | - |
| CDIF29020_RS11110 () | 2253799..2254551 | - | 753 | WP_003424201.1 | TSUP family transporter | - |
| CDIF29020_RS11115 () | 2254612..2256267 | - | 1656 | WP_003424202.1 | PocR ligand-binding domain-containing protein | - |
| CDIF29020_RS11120 () | 2256279..2256641 | - | 363 | WP_009905671.1 | Transcriptional regulator MntR | VF |
| CDIF29020_RS11125 () | 2256956..2257324 | - | 369 | WP_003424204.1 | IS607 family transposase ISCbo6 | Transposase |
| CDIF29020_RS11130 () | 2257473..2258267 | + | 795 | WP_009905672.1 | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | - |
| CDIF29020_RS11135 () | 2258420..2258848 | - | 429 | WP_003424207.1 | flavodoxin | - |
| CDIF29020_RS11140 () | 2259362..2260300 | - | 939 | WP_003424208.1 | Major intracellular serine protease | VF |
| CDIF29020_RS11145 () | 2260814..2261626 | - | 813 | WP_003424210.1 | alpha/beta hydrolase | - |
| CDIF29020_RS11150 () | 2261655..2262281 | - | 627 | WP_009905677.1 | TetR/AcrR family transcriptional regulator | - |
| CDIF29020_RS11155 () | 2262622..2264277 | - | 1656 | WP_003424214.1 | dihydroxy-acid dehydratase | - |
| CDIF29020_RS11160 () | 2264599..2264898 | - | 300 | WP_003424216.1 | hypothetical protein | - |
| CDIF29020_RS11165 () | 2265155..2265835 | + | 681 | WP_003424218.1 | VanZ family protein | - |
| CDIF29020_RS11170 () | 2265945..2266202 | - | 258 | WP_003424219.1 | hypothetical protein | - |
| CDIF29020_RS11175 () | 2266746..2267117 | + | 372 | WP_003424221.1 | helix-turn-helix domain-containing protein | - |
| CDIF29020_RS11180 () | 2267114..2267254 | - | 141 | WP_009889993.1 | hypothetical protein | - |
| CDIF29020_RS11185 () | 2267920..2268816 | - | 897 | WP_003424224.1 | AraC family transcriptional regulator | - |
| CDIF29020_RS11190 () | 2268958..2270385 | + | 1428 | WP_003424226.1 | MFS transporter | - |
| CDIF29020_RS11195 () | 2270562..2273156 | - | 2595 | WP_003424228.1 | Chaperone protein ClpB | VF |
| CDIF29020_RS11200 () | 2273193..2273789 | - | 597 | WP_003424230.1 | hypothetical protein | - |
| CDIF29020_RS11205 () | 2273806..2274210 | - | 405 | WP_003424231.1 | replication/maintenance protein RepL | - |
| CDIF29020_RS11210 () | 2274577..2274951 | + | 375 | WP_003424232.1 | GntR family transcriptional regulator | - |
| CDIF29020_RS11215 () | 2274948..2275811 | + | 864 | WP_003424233.1 | ABC transporter ATP-binding protein NatA | VF |
| CDIF29020_RS11220 () | 2275811..2276449 | + | 639 | WP_003424234.1 | ABC-2 transporter permease | - |
| CDIF29020_RS11225 () | 2276939..2277352 | + | 414 | WP_009905693.1 | GNAT family N-acetyltransferase | - |
| CDIF29020_RS11230 () | 2277544..2278761 | + | 1218 | WP_003424236.1 | N-carbamoyl-L-amino-acid hydrolase | VF |
| CDIF29020_RS11235 () | 2278923..2279621 | + | 699 | WP_003424237.1 | amino acid racemase | - |
| CDIF29020_RS11240 () | 2279815..2280432 | - | 618 | WP_003424239.1 | DUF4878 domain-containing protein | - |
| CDIF29020_RS11245 () | 2280559..2281581 | - | 1023 | WP_003424241.1 | Ornithine carbamoyltransferase | VF |
| CDIF29020_RS11250 () | 2281691..2282878 | - | 1188 | WP_003424243.1 | Acetylornithine aminotransferase | VF |
| CDIF29020_RS11255 () | 2282908..2283768 | - | 861 | WP_003424245.1 | acetylglutamate kinase | - |
| CDIF29020_RS11260 () | 2283783..2285000 | - | 1218 | WP_003424247.1 | bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ | - |
| CDIF29020_RS11265 () | 2285041..2286075 | - | 1035 | WP_003424249.1 | N-acetyl-gamma-glutamyl-phosphate reductase | - |
| CDIF29020_RS11270 () | 2286753..2287520 | - | 768 | WP_003424252.1 | YoaP domain-containing protein | - |
| CDIF29020_RS11275 () | 2287813..2288286 | + | 474 | WP_003424254.1 | GNAT family N-acetyltransferase | - |
| CDIF29020_RS11280 () | 2288667..2289224 | - | 558 | WP_003424257.1 | TetR/AcrR family transcriptional regulator | - |
| CDIF29020_RS11285 () | 2289482..2290180 | + | 699 | WP_003424258.1 | alpha/beta hydrolase | - |
| CDIF29020_RS11295 () | 2291166..2291633 | + | 468 | WP_003424265.1 | DUF2975 domain-containing protein | - |
| CDIF29020_RS11300 () | 2291644..2291859 | + | 216 | WP_003424267.1 | helix-turn-helix transcriptional regulator | - |
| CDIF29020_RS11305 () | 2292002..2292175 | + | 174 | WP_003424268.1 | hypothetical protein | - |
| CDIF29020_RS11315 () | 2293084..2293368 | - | 285 | WP_009905700.1 | hypothetical protein | - |
| CDIF29020_RS11320 () | 2295270..2295455 | + | 186 | WP_003424272.1 | hypothetical protein | - |
| CDIF29020_RS11325 () | 2295608..2296480 | - | 873 | WP_003424273.1 | MurR/RpiR family transcriptional regulator | - |
| CDIF29020_RS11330 () | 2296874..2297452 | - | 579 | WP_003424276.1 | methyltransferase domain-containing protein | - |
| CDIF29020_RS11335 () | 2297509..2298225 | - | 717 | WP_003424279.1 | rRNA pseudouridine synthase | - |
| CDIF29020_RS11340 () | 2298416..2299501 | + | 1086 | WP_003424281.1 | AI-2E family transporter | - |
| CDIF29020_RS11345 () | 2299655..2300329 | - | 675 | WP_003424284.1 | hypothetical protein | - |
| CDIF29020_RS11350 () | 2300526..2301818 | - | 1293 | WP_003424286.1 | diaminopimelate decarboxylase | - |
| CDIF29020_RS11355 () | 2301836..2303029 | - | 1194 | WP_003424287.1 | aspartate kinase | - |
| CDIF29020_RS11365 () | 2303390..2304007 | - | 618 | WP_003424290.1 | hypothetical protein | - |
| CDIF29020_RS11370 () | 2304177..2305877 | - | 1701 | WP_003424292.1 | hypothetical protein | - |
| CDIF29020_RS11375 () | 2306182..2306745 | - | 564 | WP_004452726.1 | hypothetical protein | - |
| CDIF29020_RS11380 () | 2306906..2307619 | - | 714 | WP_003424298.1 | hypothetical protein | - |
| CDIF29020_RS11385 () | 2307911..2309575 | + | 1665 | WP_003424313.1 | glutamine--tRNA ligase/YqeY domain fusion protein | - |
| CDIF29020_RS11390 () | 2309682..2310581 | - | 900 | WP_003424316.1 | YegS/Rv2252/BmrU family lipid kinase | - |
| CDIF29020_RS11395 () | 2310608..2311246 | - | 639 | WP_003424319.1 | lactate utilization protein | - |
| CDIF29020_RS11400 () | 2311586..2312584 | - | 999 | WP_003424321.1 | DUF4003 domain-containing protein | - |
| CDIF29020_RS11405 () | 2312682..2313257 | - | 576 | WP_003424324.1 | hypothetical protein | - |
| CDIF29020_RS11410 () | 2313574..2313837 | + | 264 | WP_009905715.1 | hypothetical protein | - |
| CDIF29020_RS11415 () | 2314257..2314634 | - | 378 | WP_003424328.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| CDIF29020_RS11420 () | 2314975..2316087 | + | 1113 | WP_009905716.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| CDIF29020_RS11425 () | 2316284..2316736 | - | 453 | WP_003424333.1 | hypothetical protein | - |
| CDIF29020_RS11430 () | 2316931..2318556 | - | 1626 | WP_003424336.1 | ATP-binding cassette domain-containing protein | - |
| CDIF29020_RS11435 () | 2318894..2319913 | - | 1020 | WP_003424339.1 | molybdopterin-binding protein | - |
| CDIF29020_RS11440 () | 2319910..2320479 | - | 570 | WP_009905723.1 | molybdenum cofactor cytidylyltransferase | - |
| CDIF29020_RS11445 () | 2320597..2321319 | - | 723 | WP_003424346.1 | putative selenium-dependent hydroxylase accessory protein YqeC | - |
| CDIF29020_RS11450 () | 2321502..2322779 | - | 1278 | WP_009905725.1 | IS200-IS605 family transposase ISAsp8 | Transposase |
| CDIF29020_RS11455 () | 2322918..2325224 | - | 2307 | WP_003424352.1 | molybdopterin-dependent oxidoreductase | - |
| CDIF29020_RS11460 () | 2325217..2326011 | - | 795 | WP_003424355.1 | FAD binding domain-containing protein | - |
| CDIF29020_RS11465 () | 2326118..2327476 | - | 1359 | WP_003424358.1 | purine/pyrimidine permease | - |
| CDIF29020_RS11475 () | 2328810..2329859 | - | 1050 | WP_032510213.1 | hypothetical protein | - |
| CDIF29020_RS11480 () | 2330089..2331174 | - | 1086 | WP_009890201.1 | dihydroorotate dehydrogenase | - |
| CDIF29020_RS11485 () | 2331210..2332523 | - | 1314 | WP_003424364.1 | amidohydrolase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|