MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 21309 bp
Accession: NZ_CP012289 Location: 1..21309 Organism: Pediococcus damnosus strain TMW 2.1535 Replicon: plasmid pL21535-1
Accession: NZ_CP012289 Location: 1..21309 Organism: Pediococcus damnosus strain TMW 2.1535 Replicon: plasmid pL21535-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ADU72_RS10515 () | 902..1459 | - | 558 | WP_158509302.1 | IS3 family transposase IS1520 | Transposase |
| ADU72_RS12315 () | 1500..1661 | - | 162 | WP_158510062.1 | IS3 family transposase IS1520 | Transposase |
| ADU72_RS10520 () | 1858..3105 | + | 1248 | WP_062904581.1 | ISL3 family transposase IS1165 | Transposase |
| ADU72_RS10530 () | 3674..4018 | - | 345 | WP_001748110.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| ADU72_RS10535 () | 4012..4275 | - | 264 | WP_003643337.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ADU72_RS10540 () | 4361..4948 | + | 588 | WP_062904616.1 | site-specific integrase | - |
| ADU72_RS10545 () | 5402..5701 | + | 300 | Protein_7 | IS30 family transposase IS1139 | Transposase |
| ADU72_RS10550 () | 5764..6378 | + | 615 | WP_052694451.1 | NUMOD4 motif-containing HNH endonuclease | - |
| ADU72_RS10555 () | 6576..7034 | + | 459 | WP_062904617.1 | phage terminase small subunit P27 family | - |
| ADU72_RS12320 () | 7048..7200 | - | 153 | WP_155386924.1 | hypothetical protein | - |
| ADU72_RS10560 () | 7187..7606 | - | 420 | WP_046870702.1 | hypothetical protein | - |
| ADU72_RS10565 () | 7921..9528 | - | 1608 | WP_062904618.1 | hypothetical protein | - |
| ADU72_RS10570 () | 9488..10321 | - | 834 | WP_062904619.1 | bifunctional DNA primase/polymerase | - |
| ADU72_RS10575 () | 10318..10572 | - | 255 | WP_062904620.1 | hypothetical protein | - |
| ADU72_RS12155 () | 10719..10922 | - | 204 | WP_081115641.1 | helix-turn-helix domain-containing protein | - |
| ADU72_RS10585 () | 11054..11716 | + | 663 | WP_062904621.1 | helix-turn-helix transcriptional regulator | - |
| ADU72_RS10590 () | 11804..12064 | - | 261 | WP_062916826.1 | hypothetical protein | - |
| ADU72_RS10595 () | 13164..13670 | - | 507 | WP_046870698.1 | hypothetical protein | - |
| ADU72_RS10600 () | 13740..14099 | - | 360 | WP_046870705.1 | hypothetical protein | - |
| ADU72_RS10610 () | 15032..15961 | + | 930 | WP_024855727.1 | IS30 family transposase ISLpl1 | Transposase |
| ADU72_RS10615 () | 16083..16850 | + | 768 | WP_046870855.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| ADU72_RS10620 () | 17090..17659 | - | 570 | WP_145913144.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|