MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 197338 bp
Accession: NZ_CP012267 Location: 1..197338 Organism: Cronobacter dublinensis subsp. dublinensis LMG 23823 Replicon: plasmid pCDU1
Accession: NZ_CP012267 Location: 1..197338 Organism: Cronobacter dublinensis subsp. dublinensis LMG 23823 Replicon: plasmid pCDU1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFK67_RS20560 () | 3751..4128 | - | 378 | WP_007679865.1 | response regulator | - |
| AFK67_RS20565 () | 4140..4418 | - | 279 | WP_007727556.1 | DUF1427 family protein | - |
| AFK67_RS20570 () | 4415..4657 | - | 243 | WP_007727557.1 | DUF1427 family protein | - |
| AFK67_RS20575 () | 4717..5403 | - | 687 | WP_007727558.1 | hydrolase | - |
| AFK67_RS20580 () | 5704..7578 | + | 1875 | WP_007727559.1 | amidohydrolase | - |
| AFK67_RS20585 () | 7583..8011 | + | 429 | WP_007727560.1 | DoxX family protein | - |
| AFK67_RS20590 () | 7998..9611 | + | 1614 | WP_007727561.1 | MFS transporter | - |
| AFK67_RS20595 () | 9665..10483 | + | 819 | WP_007727562.1 | alpha/beta hydrolase | - |
| AFK67_RS20600 () | 10542..11918 | - | 1377 | WP_007727563.1 | PTS transporter subunit EIIC | - |
| AFK67_RS20605 () | 12194..13393 | + | 1200 | WP_007727568.1 | Starvation sensing protein RspA | - |
| AFK67_RS20610 () | 13381..14100 | - | 720 | WP_007727571.1 | GntR family transcriptional regulator | - |
| AFK67_RS20615 () | 14263..14556 | - | 294 | WP_007750709.1 | NINE protein | - |
| AFK67_RS20620 () | 14697..15044 | + | 348 | WP_007727575.1 | nuclear transport factor 2 family protein | - |
| AFK67_RS20625 () | 15183..16751 | + | 1569 | WP_053532923.1 | sensor domain-containing diguanylate cyclase | - |
| AFK67_RS20630 () | 16803..17615 | - | 813 | WP_007727592.1 | hypothetical protein | - |
| AFK67_RS20635 () | 18206..18688 | + | 483 | WP_032967471.1 | type VI secretion system tube protein Hcp | - |
| AFK67_RS20640 () | 18707..19645 | + | 939 | WP_007727600.1 | hypothetical protein | - |
| AFK67_RS20645 () | 19746..20636 | - | 891 | WP_007727610.1 | dihydrodipicolinate synthase family protein | - |
| AFK67_RS20650 () | 20666..21544 | - | 879 | WP_038885118.1 | DMT family transporter | - |
| AFK67_RS20655 () | 21650..22984 | + | 1335 | WP_007727619.1 | PLP-dependent aminotransferase family protein | - |
| AFK67_RS20660 () | 23687..24181 | + | 495 | WP_053532926.1 | type VI secretion system contractile sheath small subunit | - |
| AFK67_RS20665 () | 24214..25758 | + | 1545 | WP_053532928.1 | type VI secretion system contractile sheath large subunit | - |
| AFK67_RS20670 () | 25770..27110 | + | 1341 | WP_032966520.1 | type VI secretion system baseplate subunit TssK | - |
| AFK67_RS20675 () | 27107..27760 | + | 654 | WP_038884979.1 | type VI secretion system protein TssL, short form | - |
| AFK67_RS20680 () | 27764..29449 | + | 1686 | WP_038884983.1 | OmpA family protein | - |
| AFK67_RS20685 () | 29470..29961 | + | 492 | WP_007717541.1 | Hcp family type VI secretion system effector | - |
| AFK67_RS20690 () | 30110..32767 | + | 2658 | WP_038884987.1 | type VI secretion system ATPase TssH | - |
| AFK67_RS20695 () | 32764..35289 | + | 2526 | WP_007712521.1 | type VI secretion system tip protein VgrG | - |
| AFK67_RS20700 () | 35286..36854 | + | 1569 | WP_007712522.1 | DUF2235 domain-containing protein | - |
| AFK67_RS20705 () | 36851..37492 | + | 642 | WP_032966447.1 | DUF2931 family protein | - |
| AFK67_RS20710 () | 37773..38414 | + | 642 | WP_007712525.1 | DUF2931 family protein | - |
| AFK67_RS22395 () | 38730..38996 | + | 267 | WP_071602800.1 | PAAR domain-containing protein | - |
| AFK67_RS20715 () | 39000..40157 | + | 1158 | WP_050569293.1 | hypothetical protein | - |
| AFK67_RS20720 () | 40141..43572 | + | 3432 | WP_007712533.1 | hypothetical protein | - |
| AFK67_RS20725 () | 43619..45382 | + | 1764 | WP_032966448.1 | type VI secretion system baseplate subunit TssF | - |
| AFK67_RS20730 () | 45337..46434 | + | 1098 | WP_032966450.1 | type VI secretion system baseplate subunit TssG | - |
| AFK67_RS20735 () | 46415..46942 | + | 528 | WP_007712549.1 | type VI secretion system lipoprotein TssJ | - |
| AFK67_RS20740 () | 46993..47748 | - | 756 | WP_007712551.1 | thiol:disulfide interchange protein DsbG | - |
| AFK67_RS20745 () | 47792..48052 | - | 261 | WP_032966453.1 | DUF2534 family protein | - |
| AFK67_RS20750 () | 48730..48975 | + | 246 | WP_007712563.1 | DUF2543 family protein | - |
| AFK67_RS20755 () | 49050..49808 | - | 759 | WP_007712564.1 | ABC transporter ATP-binding protein | - |
| AFK67_RS20760 () | 49805..50845 | - | 1041 | WP_050555333.1 | iron ABC transporter permease | - |
| AFK67_RS20765 () | 50845..51840 | - | 996 | WP_032966458.1 | ABC transporter substrate-binding protein | - |
| AFK67_RS20770 () | 52094..53329 | + | 1236 | WP_032966455.1 | MFS transporter | - |
| AFK67_RS20775 () | 53481..54314 | + | 834 | WP_007712578.1 | transcriptional antiterminator BglG | - |
| AFK67_RS20780 () | 54455..56314 | + | 1860 | WP_007712581.1 | PTS beta-glucoside transporter subunit IIABC | - |
| AFK67_RS20785 () | 56330..57721 | + | 1392 | WP_007712584.1 | 6-phospho-beta-glucosidase | - |
| AFK67_RS20790 () | 58723..59697 | + | 975 | WP_038885023.1 | tyrosine-type recombinase/integrase | - |
| AFK67_RS20795 () | 59781..60677 | - | 897 | WP_007728657.1 | transcription regulator Mig-14 | - |
| AFK67_RS20800 () | 60764..63880 | - | 3117 | WP_007728659.1 | multidrug efflux RND transporter permease subunit | - |
| AFK67_RS20805 () | 63911..65026 | - | 1116 | WP_007728662.1 | efflux RND transporter periplasmic adaptor subunit | - |
| AFK67_RS20810 () | 65103..66587 | - | 1485 | WP_007728665.1 | MFS transporter | - |
| AFK67_RS20815 () | 66695..67291 | + | 597 | WP_032967519.1 | TetR family transcriptional regulator | - |
| AFK67_RS22400 () | 67390..68175 | + | 786 | WP_081591118.1 | MipA/OmpV family protein | - |
| AFK67_RS20820 () | 68276..68608 | + | 333 | WP_007728676.1 | AraC family transcriptional regulator | - |
| AFK67_RS20825 () | 68950..69441 | + | 492 | WP_032967520.1 | GNAT family N-acetyltransferase | - |
| AFK67_RS20830 () | 69700..70377 | - | 678 | WP_007728679.1 | SDR family oxidoreductase | - |
| AFK67_RS20835 () | 70414..71442 | - | 1029 | WP_007728681.1 | alpha/beta hydrolase | - |
| AFK67_RS22645 () | 71718..73169 | + | 1452 | WP_082355750.1 | tyrosine-protein phosphatase | - |
| AFK67_RS20850 () | 73177..73737 | - | 561 | WP_032967522.1 | phosphoglycerate mutase family protein | - |
| AFK67_RS20855 () | 74020..75975 | + | 1956 | WP_081591119.1 | acyltransferase | - |
| AFK67_RS20860 () | 76275..77021 | + | 747 | WP_007728695.1 | SDR family oxidoreductase | - |
| AFK67_RS20865 () | 77130..77723 | + | 594 | WP_007733164.1 | cytochrome b | - |
| AFK67_RS20870 () | 77748..78263 | + | 516 | WP_032967664.1 | RNA polymerase sigma factor | - |
| AFK67_RS20875 () | 78260..79063 | + | 804 | WP_007733166.1 | hypothetical protein | - |
| AFK67_RS20880 () | 79073..79639 | - | 567 | WP_038885040.1 | YceI family protein | - |
| AFK67_RS20885 () | 79870..80145 | + | 276 | WP_007733174.1 | hypothetical protein | - |
| AFK67_RS20890 () | 80260..81912 | - | 1653 | WP_007733177.1 | MCP four helix bundle domain-containing protein | - |
| AFK67_RS20895 () | 82651..83247 | + | 597 | WP_007733179.1 | glutathione S-transferase family protein | - |
| AFK67_RS20900 () | 83397..83816 | + | 420 | WP_007733187.1 | hypothetical protein | - |
| AFK67_RS20905 () | 83879..84277 | - | 399 | WP_007733190.1 | Exc2 family lipoprotein | - |
| AFK67_RS20910 () | 84508..86454 | - | 1947 | WP_007733193.1 | methyl-accepting chemotaxis protein | - |
| AFK67_RS20915 () | 86821..87591 | - | 771 | WP_007733195.1 | AAA family ATPase | - |
| AFK67_RS20920 () | 88196..89449 | - | 1254 | WP_197336868.1 | AAA family ATPase | - |
| AFK67_RS20925 () | 89677..92388 | - | 2712 | WP_007733202.1 | magnesium-translocating P-type ATPase | - |
| AFK67_RS20930 () | 92939..94060 | - | 1122 | WP_007733206.1 | cupin domain-containing protein | - |
| AFK67_RS23260 () | 94206..94373 | + | 168 | WP_007733211.1 | hypothetical protein | - |
| AFK67_RS20935 () | 94499..97435 | + | 2937 | WP_007733213.1 | autotransporter domain-containing protein | - |
| AFK67_RS20940 () | 97498..99573 | - | 2076 | WP_007733215.1 | glycogen debranching protein GlgX | - |
| AFK67_RS20945 () | 99642..102173 | - | 2532 | WP_038885052.1 | malto-oligosyltrehalose synthase | - |
| AFK67_RS20950 () | 102170..103954 | - | 1785 | WP_007733217.1 | malto-oligosyltrehalose trehalohydrolase | - |
| AFK67_RS20955 () | 104260..105579 | - | 1320 | WP_007733218.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| AFK67_RS20960 () | 105582..105866 | - | 285 | WP_007669594.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| AFK67_RS20965 () | 105989..106879 | - | 891 | WP_007733221.1 | siderophore-interacting protein | - |
| AFK67_RS20970 () | 106876..108087 | - | 1212 | WP_007669601.1 | MFS transporter | - |
| AFK67_RS20975 () | 108223..109971 | + | 1749 | WP_007669604.1 | citrate:6-N-acetyl-6-N-hydroxy-L-lysine ligase subunit alpha | - |
| AFK67_RS20980 () | 109964..110911 | + | 948 | WP_007669608.1 | acetyltransferase | - |
| AFK67_RS20985 () | 110908..112653 | + | 1746 | WP_007733225.1 | aerobactin synthase IucC | - |
| AFK67_RS20990 () | 112650..113972 | + | 1323 | WP_007733227.1 | SidA/IucD/PvdA family monooxygenase | - |
| AFK67_RS20995 () | 113997..116192 | + | 2196 | WP_007733229.1 | TonB-dependent siderophore receptor | - |
| AFK67_RS21000 () | 116867..117835 | - | 969 | WP_007733234.1 | ParB/RepB/Spo0J family partition protein | - |
| AFK67_RS21005 () | 117843..119042 | - | 1200 | WP_007733236.1 | AAA family ATPase | - |
| AFK67_RS21015 () | 119856..120911 | + | 1056 | WP_050555390.1 | RepB family plasmid replication initiator protein | - |
| AFK67_RS21020 () | 121521..123185 | + | 1665 | WP_007733240.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| AFK67_RS21025 () | 123199..135534 | + | 12336 | WP_050569295.1 | hemagglutinin repeat-containing protein | - |
| AFK67_RS21030 () | 135534..136073 | + | 540 | WP_032967668.1 | hypothetical protein | - |
| AFK67_RS22650 () | 136552..137349 | + | 798 | WP_200863229.1 | VENN motif pre-toxin domain-containing protein | - |
| AFK67_RS21040 () | 137549..138022 | + | 474 | WP_032966597.1 | hypothetical protein | - |
| AFK67_RS21045 () | 138138..138404 | + | 267 | Protein_99 | DNA/RNA non-specific endonuclease | - |
| AFK67_RS21050 () | 138407..138742 | + | 336 | WP_032966601.1 | hypothetical protein | - |
| AFK67_RS23265 () | 139093..139263 | + | 171 | WP_164474029.1 | hypothetical protein | - |
| AFK67_RS21055 () | 139274..139627 | + | 354 | WP_032966614.1 | hypothetical protein | - |
| AFK67_RS23110 () | 140020..140175 | + | 156 | WP_007714600.1 | hypothetical protein | - |
| AFK67_RS23145 () | 140451..140759 | - | 309 | WP_162140671.1 | hypothetical protein | - |
| AFK67_RS22430 () | 140937..141356 | + | 420 | WP_071882619.1 | VENN motif pre-toxin domain-containing protein | - |
| AFK67_RS22435 () | 141694..142026 | + | 333 | WP_071602806.1 | hypothetical protein | - |
| AFK67_RS21070 () | 142028..142363 | + | 336 | WP_007712502.1 | hypothetical protein | - |
| AFK67_RS21075 () | 142367..142759 | + | 393 | Protein_108 | hypothetical protein | - |
| AFK67_RS23030 () | 142845..143111 | + | 267 | WP_134792904.1 | hypothetical protein | - |
| AFK67_RS23115 () | 143522..143677 | + | 156 | WP_007714600.1 | hypothetical protein | - |
| AFK67_RS23150 () | 143953..144261 | - | 309 | WP_162490548.1 | hypothetical protein | - |
| AFK67_RS21080 () | 145074..145418 | + | 345 | WP_032967393.1 | hypothetical protein | - |
| AFK67_RS21085 () | 145391..145786 | + | 396 | WP_032967392.1 | hypothetical protein | - |
| AFK67_RS22440 () | 146112..146546 | + | 435 | WP_071882620.1 | VENN motif pre-toxin domain-containing protein | - |
| AFK67_RS22445 () | 146674..146964 | + | 291 | WP_071602808.1 | hypothetical protein | - |
| AFK67_RS22450 () | 146973..147377 | + | 405 | WP_071602807.1 | DUF4279 domain-containing protein | - |
| AFK67_RS21095 () | 147611..147874 | + | 264 | WP_032967481.1 | MafI family immunity protein | - |
| AFK67_RS21100 () | 148121..148405 | + | 285 | Protein_118 | histidine phosphatase family protein | - |
| AFK67_RS23120 () | 148727..148870 | + | 144 | WP_007727693.1 | hypothetical protein | - |
| AFK67_RS23125 () | 149111..149275 | + | 165 | WP_155885910.1 | hypothetical protein | - |
| AFK67_RS21105 () | 149281..149652 | + | 372 | WP_038885080.1 | hypothetical protein | - |
| AFK67_RS21110 () | 149767..150390 | + | 624 | WP_007727699.1 | histidine phosphatase family protein | - |
| AFK67_RS21115 () | 150482..151249 | + | 768 | WP_007727702.1 | rhomboid protein | - |
| AFK67_RS21120 () | 151368..152426 | + | 1059 | WP_007727706.1 | ParB/Srx family N-terminal domain-containing protein | - |
| AFK67_RS21125 () | 152430..152960 | - | 531 | WP_007727707.1 | GNAT family N-acetyltransferase | - |
| AFK67_RS21130 () | 153160..154365 | + | 1206 | WP_032967475.1 | MFS transporter | - |
| AFK67_RS21135 () | 154488..155030 | + | 543 | WP_007727711.1 | hypothetical protein | - |
| AFK67_RS21140 () | 155027..155569 | + | 543 | WP_007727713.1 | hypothetical protein | - |
| AFK67_RS21145 () | 155617..156312 | + | 696 | WP_007727715.1 | YafY family transcriptional regulator | - |
| AFK67_RS21150 () | 156368..156751 | + | 384 | WP_007727719.1 | hypothetical protein | - |
| AFK67_RS21155 () | 156815..157705 | - | 891 | WP_007727722.1 | transcriptional regulator | - |
| AFK67_RS21160 () | 157924..158703 | - | 780 | WP_007727725.1 | MipA/OmpV family protein | - |
| AFK67_RS21165 () | 158825..159517 | + | 693 | WP_007727727.1 | response regulator | - |
| AFK67_RS21170 () | 159514..160710 | + | 1197 | WP_038885090.1 | two-component sensor histidine kinase | - |
| AFK67_RS21175 () | 160789..161940 | + | 1152 | WP_053532930.1 | efflux RND transporter periplasmic adaptor subunit | - |
| AFK67_RS21180 () | 161937..165005 | + | 3069 | WP_007727738.1 | efflux RND transporter permease subunit | - |
| AFK67_RS21185 () | 165010..165453 | - | 444 | WP_007727741.1 | NUDIX domain-containing protein | - |
| AFK67_RS21190 () | 165637..166125 | + | 489 | WP_007727744.1 | DinB family protein | - |
| AFK67_RS21195 () | 166162..166569 | - | 408 | WP_007727745.1 | nuclear transport factor 2 family protein | - |
| AFK67_RS21200 () | 166664..167392 | + | 729 | WP_032967477.1 | AraC family transcriptional regulator | - |
| AFK67_RS21205 () | 167403..168302 | - | 900 | WP_007727747.1 | ABC transporter six-transmembrane domain-containing protein | - |
| AFK67_RS21210 () | 168405..168983 | + | 579 | WP_007727749.1 | TetR/AcrR family transcriptional regulator | - |
| AFK67_RS21215 () | 169093..172299 | - | 3207 | WP_007727751.1 | hypothetical protein | - |
| AFK67_RS21220 () | 172309..173721 | - | 1413 | WP_007727766.1 | hypothetical protein | - |
| AFK67_RS21225 () | 173734..174675 | - | 942 | WP_038885094.1 | WYL domain-containing protein | - |
| AFK67_RS21230 () | 175239..176534 | + | 1296 | WP_053532932.1 | MFS transporter | - |
| AFK67_RS21235 () | 176549..177355 | + | 807 | WP_038885103.1 | substrate-binding domain-containing protein | - |
| AFK67_RS21240 () | 177330..178229 | - | 900 | WP_038885105.1 | LysR family transcriptional regulator | - |
| AFK67_RS21245 () | 178297..179217 | - | 921 | WP_007734039.1 | LysR family transcriptional regulator | - |
| AFK67_RS21250 () | 179321..180835 | + | 1515 | WP_007734037.1 | MFS transporter | - |
| AFK67_RS21255 () | 180841..181151 | - | 311 | Protein_151 | darcynin | - |
| AFK67_RS22455 () | 181247..181528 | + | 282 | WP_007734033.1 | hypothetical protein | - |
| AFK67_RS21265 () | 181551..181862 | + | 312 | WP_007734030.1 | hypothetical protein | - |
| AFK67_RS21270 () | 181849..182598 | - | 750 | WP_007734027.1 | metallophosphoesterase | - |
| AFK67_RS21275 () | 182714..182992 | - | 279 | WP_007734023.1 | hypothetical protein | - |
| AFK67_RS21280 () | 183033..183332 | - | 300 | WP_032967681.1 | hypothetical protein | - |
| AFK67_RS21285 () | 183498..183737 | - | 240 | WP_007734019.1 | hypothetical protein | - |
| AFK67_RS21290 () | 184144..185361 | + | 1218 | WP_007734017.1 | diguanylate phosphodiesterase | - |
| AFK67_RS21295 () | 185597..186340 | + | 744 | WP_007734014.1 | MerR family transcriptional regulator | - |
| AFK67_RS21300 () | 186520..187527 | + | 1008 | WP_032967680.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| AFK67_RS21305 () | 187694..188890 | + | 1197 | WP_007734009.1 | MFS transporter | - |
| AFK67_RS21310 () | 188959..190878 | - | 1920 | WP_007734007.1 | HAMP domain-containing protein | - |
| AFK67_RS21315 () | 191336..191722 | + | 387 | WP_007734003.1 | hypothetical protein | - |
| AFK67_RS21320 () | 191879..192424 | + | 546 | WP_032967473.1 | thioredoxin fold domain-containing protein | - |
| AFK67_RS21325 () | 192459..192992 | - | 534 | WP_007727538.1 | GNAT family N-acetyltransferase | - |
| AFK67_RS21330 () | 193095..193418 | + | 324 | WP_007727541.1 | antibiotic biosynthesis monooxygenase | - |
| AFK67_RS21335 () | 193411..193809 | + | 399 | WP_007727543.1 | hypothetical protein | - |
| AFK67_RS21340 () | 193782..194507 | + | 726 | Protein_168 | helix-turn-helix transcriptional regulator | - |
| AFK67_RS21345 () | 194833..195450 | + | 618 | WP_007727549.1 | response regulator transcription factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|