MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110093 bp
Accession: NZ_CP012254 Location: 1..110093 Organism: Cronobacter sakazakii strain NCTC 8155 Replicon: plasmid pCS1
Accession: NZ_CP012254 Location: 1..110093 Organism: Cronobacter sakazakii strain NCTC 8155 Replicon: plasmid pCS1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFK64_RS19990 () | 2403..2738 | + | 336 | WP_029590309.1 | phage tail protein | - |
| AFK64_RS19995 () | 2827..3528 | + | 702 | WP_029590310.1 | phage minor tail protein L | - |
| AFK64_RS20000 () | 3518..4315 | + | 798 | WP_029590312.1 | C40 family peptidase | - |
| AFK64_RS20005 () | 4303..4914 | + | 612 | WP_029463977.1 | tail assembly protein | - |
| AFK64_RS20010 () | 4935..9092 | + | 4158 | WP_029590314.1 | DUF1983 domain-containing protein | - |
| AFK64_RS23030 () | 9204..9491 | + | 288 | WP_133051625.1 | hypothetical protein | - |
| AFK64_RS20015 () | 9876..10523 | + | 648 | WP_029590316.1 | hypothetical protein | - |
| AFK64_RS20020 () | 11996..13123 | + | 1128 | Protein_8 | tail fiber domain-containing protein | - |
| AFK64_RS20025 () | 13213..13536 | + | 324 | WP_029463980.1 | hypothetical protein | - |
| AFK64_RS20030 () | 13548..14240 | + | 693 | WP_029590318.1 | membrane protein | - |
| AFK64_RS20035 () | 14242..14493 | + | 252 | WP_032803499.1 | hypothetical protein | - |
| AFK64_RS20040 () | 14677..15195 | - | 519 | WP_192575777.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AFK64_RS20045 () | 15220..15489 | - | 270 | WP_029463984.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AFK64_RS20050 () | 15892..16557 | + | 666 | WP_029590320.1 | AAA family ATPase | - |
| AFK64_RS20055 () | 16563..16916 | + | 354 | WP_161576472.1 | hypothetical protein | - |
| AFK64_RS20060 () | 17122..18285 | + | 1164 | WP_029590324.1 | hypothetical protein | - |
| AFK64_RS20065 () | 18493..19218 | + | 726 | WP_029463882.1 | hypothetical protein | - |
| AFK64_RS20070 () | 19279..20619 | + | 1341 | WP_029463883.1 | AAA family ATPase | - |
| AFK64_RS20075 () | 20770..21885 | + | 1116 | WP_029463884.1 | hypothetical protein | - |
| AFK64_RS20080 () | 21918..22334 | + | 417 | WP_029463885.1 | hypothetical protein | - |
| AFK64_RS23230 () | 22462..23256 | + | 795 | WP_029463886.1 | hypothetical protein | - |
| AFK64_RS23235 () | 23338..23802 | + | 465 | WP_192575776.1 | hypothetical protein | - |
| AFK64_RS20095 () | 23837..25159 | + | 1323 | WP_032803500.1 | hypothetical protein | - |
| AFK64_RS23240 () | 25159..25335 | + | 177 | WP_088251123.1 | hypothetical protein | - |
| AFK64_RS20100 () | 25319..25534 | + | 216 | WP_029463888.1 | hypothetical protein | - |
| AFK64_RS23245 () | 25531..25683 | + | 153 | WP_087600955.1 | hypothetical protein | - |
| AFK64_RS20105 () | 25680..25985 | + | 306 | WP_029463889.1 | hypothetical protein | - |
| AFK64_RS20115 () | 27428..28114 | + | 687 | WP_131824121.1 | hypothetical protein | - |
| AFK64_RS20130 () | 29815..30114 | + | 300 | WP_029590209.1 | hypothetical protein | - |
| AFK64_RS20140 () | 30402..30758 | + | 357 | WP_131824841.1 | hypothetical protein | - |
| AFK64_RS22625 () | 30998..31857 | + | 860 | Protein_32 | IS3 family transposase | - |
| AFK64_RS20155 () | 32139..33215 | + | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| AFK64_RS23045 () | 33232..33540 | + | 309 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| AFK64_RS20160 () | 33852..34955 | + | 1104 | WP_029590221.1 | site-specific integrase | - |
| AFK64_RS20165 () | 34950..35336 | - | 387 | WP_029590223.1 | hypothetical protein | - |
| AFK64_RS20170 () | 35594..35806 | + | 213 | WP_029463898.1 | hypothetical protein | - |
| AFK64_RS20175 () | 35913..38243 | + | 2331 | WP_029590224.1 | porphyrin biosynthesis protein | - |
| AFK64_RS20180 () | 38338..39573 | + | 1236 | WP_029463900.1 | AAA family ATPase | - |
| AFK64_RS20185 () | 39754..43272 | + | 3519 | WP_029590226.1 | DNA polymerase III subunit alpha | - |
| AFK64_RS20190 () | 43269..43712 | + | 444 | WP_029590228.1 | hypothetical protein | - |
| AFK64_RS20195 () | 43910..44329 | + | 420 | WP_032803454.1 | hypothetical protein | - |
| AFK64_RS20200 () | 44340..44639 | + | 300 | WP_029463904.1 | hypothetical protein | - |
| AFK64_RS20205 () | 44690..45253 | - | 564 | WP_029590230.1 | hypothetical protein | - |
| AFK64_RS20210 () | 45806..46237 | + | 432 | WP_029590231.1 | hypothetical protein | - |
| AFK64_RS20215 () | 46357..47367 | + | 1011 | WP_029590232.1 | hypothetical protein | - |
| AFK64_RS20220 () | 47428..48372 | + | 945 | WP_029463908.1 | exonuclease | - |
| AFK64_RS20225 () | 48372..48638 | + | 267 | WP_029590234.1 | hypothetical protein | - |
| AFK64_RS20230 () | 48833..49720 | + | 888 | Protein_49 | recombinase RecA | - |
| AFK64_RS20235 () | 49858..50277 | + | 420 | WP_032803458.1 | hypothetical protein | - |
| AFK64_RS20240 () | 50344..50619 | + | 276 | WP_029590240.1 | hypothetical protein | - |
| AFK64_RS20250 () | 50836..51174 | + | 339 | WP_029590243.1 | hypothetical protein | - |
| AFK64_RS20255 () | 51174..51386 | + | 213 | WP_029463913.1 | hypothetical protein | - |
| AFK64_RS20260 () | 51915..53015 | - | 1101 | WP_029590245.1 | RepB family plasmid replication initiator protein | - |
| AFK64_RS20265 () | 53338..53982 | + | 645 | WP_029590247.1 | hypothetical protein | - |
| AFK64_RS20270 () | 54058..54543 | + | 486 | WP_029590249.1 | GNAT family N-acetyltransferase | - |
| AFK64_RS20275 () | 54718..55803 | + | 1086 | WP_029590251.1 | exonuclease SbcCD subunit D | - |
| AFK64_RS20285 () | 56033..57949 | + | 1917 | WP_029590253.1 | AAA family ATPase | - |
| AFK64_RS20290 () | 57975..58685 | + | 711 | WP_108696164.1 | hypothetical protein | - |
| AFK64_RS20295 () | 58695..59264 | + | 570 | WP_029463921.1 | hypothetical protein | - |
| AFK64_RS20300 () | 59341..61689 | + | 2349 | WP_029463922.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| AFK64_RS20305 () | 61821..62963 | + | 1143 | WP_029463923.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| AFK64_RS20310 () | 63045..63920 | + | 876 | WP_029590255.1 | hypothetical protein | - |
| AFK64_RS20315 () | 64102..65205 | + | 1104 | WP_029590257.1 | thymidylate synthase | - |
| AFK64_RS20320 () | 65207..65620 | + | 414 | WP_032803470.1 | hypothetical protein | - |
| AFK64_RS20325 () | 65617..66093 | + | 477 | WP_029590259.1 | dihydrofolate reductase | - |
| AFK64_RS20330 () | 66093..66737 | + | 645 | WP_029590261.1 | AAA family ATPase | - |
| AFK64_RS20335 () | 66801..67220 | + | 420 | WP_029590263.1 | hypothetical protein | - |
| AFK64_RS20340 () | 67230..67787 | + | 558 | WP_029590265.1 | 3'-5' exonuclease | - |
| AFK64_RS20345 () | 67909..68712 | + | 804 | WP_029590267.1 | hypothetical protein | - |
| AFK64_RS20355 () | 69047..69682 | - | 636 | WP_069682836.1 | hypothetical protein | - |
| AFK64_RS20360 () | 69967..70560 | + | 594 | WP_029463933.1 | phage N-6-adenine-methyltransferase | - |
| AFK64_RS20365 () | 70760..70990 | + | 231 | WP_000262979.1 | hypothetical protein | - |
| AFK64_RS20370 () | 71584..72183 | + | 600 | WP_029463934.1 | ribonuclease HI | - |
| AFK64_RS23100 () | 72327..72803 | + | 477 | WP_029590275.1 | hypothetical protein | - |
| AFK64_RS20380 () | 72813..73001 | + | 189 | WP_029463936.1 | hypothetical protein | - |
| AFK64_RS20385 () | 73067..73492 | + | 426 | WP_029590277.1 | tellurite resistance TerB family protein | - |
| AFK64_RS22420 () | 73492..73647 | + | 156 | WP_014342167.1 | DUF3927 family protein | - |
| AFK64_RS20390 () | 73774..74352 | + | 579 | WP_029463938.1 | hypothetical protein | - |
| AFK64_RS20400 () | 74758..77874 | - | 3117 | WP_029590280.1 | HsdR family type I site-specific deoxyribonuclease | - |
| AFK64_RS20405 () | 77991..79202 | - | 1212 | WP_029590281.1 | restriction endonuclease subunit S | - |
| AFK64_RS20410 () | 79199..80755 | - | 1557 | WP_029590282.1 | type I restriction-modification system subunit M | - |
| AFK64_RS20415 () | 80977..82665 | + | 1689 | WP_029590283.1 | DUF4942 domain-containing protein | - |
| AFK64_RS20420 () | 82721..83110 | + | 390 | Protein_84 | hypothetical protein | - |
| AFK64_RS23135 () | 83152..83307 | + | 156 | WP_162490465.1 | hypothetical protein | - |
| AFK64_RS20425 () | 83540..84739 | + | 1200 | WP_029590285.1 | hypothetical protein | - |
| AFK64_RS20430 () | 86157..86399 | - | 243 | WP_016051703.1 | hypothetical protein | - |
| AFK64_RS20435 () | 86545..86760 | + | 216 | WP_016051704.1 | hypothetical protein | - |
| AFK64_RS20440 () | 86774..86989 | + | 216 | WP_160859106.1 | hypothetical protein | - |
| AFK64_RS20445 () | 87130..87441 | + | 312 | WP_016051706.1 | hypothetical protein | - |
| AFK64_RS20450 () | 87569..87964 | + | 396 | WP_029590286.1 | hypothetical protein | - |
| AFK64_RS20455 () | 88094..88468 | + | 375 | WP_021313142.1 | hypothetical protein | - |
| AFK64_RS20460 () | 88471..88752 | + | 282 | WP_029590287.1 | ABC transporter | - |
| AFK64_RS20465 () | 88957..89439 | + | 483 | WP_029590288.1 | hypothetical protein | - |
| AFK64_RS20470 () | 90097..90747 | - | 651 | WP_029463950.1 | hypothetical protein | - |
| AFK64_RS20475 () | 91064..91363 | - | 300 | WP_032803492.1 | hypothetical protein | - |
| AFK64_RS20480 () | 91373..91894 | - | 522 | WP_029590290.1 | transcriptional regulator | - |
| AFK64_RS20485 () | 92037..92816 | + | 780 | WP_029590291.1 | hypothetical protein | - |
| AFK64_RS20490 () | 92902..93180 | - | 279 | WP_029590292.1 | hypothetical protein | - |
| AFK64_RS20495 () | 93183..94742 | - | 1560 | WP_029590293.1 | DEAD/DEAH box helicase | - |
| AFK64_RS20500 () | 94807..95505 | + | 699 | WP_029590294.1 | ParB N-terminal domain-containing protein | - |
| AFK64_RS20505 () | 95505..96173 | + | 669 | WP_029590295.1 | ParB N-terminal domain-containing protein | - |
| AFK64_RS20510 () | 96170..96808 | + | 639 | WP_006812519.1 | ATP-binding cassette domain-containing protein | - |
| AFK64_RS20515 () | 96801..97055 | + | 255 | WP_001113021.1 | hypothetical protein | - |
| AFK64_RS20520 () | 97061..97951 | + | 891 | WP_032803507.1 | hypothetical protein | - |
| AFK64_RS20525 () | 97961..98227 | + | 267 | WP_000176291.1 | hypothetical protein | - |
| AFK64_RS20530 () | 98423..99064 | + | 642 | WP_029590299.1 | hypothetical protein | - |
| AFK64_RS20535 () | 99067..100323 | + | 1257 | WP_029463961.1 | phage terminase large subunit | - |
| AFK64_RS20540 () | 100356..101930 | + | 1575 | WP_029590300.1 | phage portal protein | - |
| AFK64_RS20545 () | 101953..102846 | + | 894 | WP_029590301.1 | hypothetical protein | - |
| AFK64_RS20550 () | 102872..103753 | + | 882 | WP_029590302.1 | hypothetical protein | - |
| AFK64_RS20555 () | 103829..104263 | + | 435 | WP_029590303.1 | hypothetical protein | - |
| AFK64_RS20560 () | 104263..105096 | + | 834 | WP_029590304.1 | hypothetical protein | - |
| AFK64_RS20565 () | 105194..105538 | + | 345 | WP_029590305.1 | hypothetical protein | - |
| AFK64_RS20570 () | 105529..106002 | + | 474 | WP_029463968.1 | hypothetical protein | - |
| AFK64_RS20575 () | 106004..106387 | + | 384 | WP_029463969.1 | minor capsid protein | - |
| AFK64_RS20580 () | 106462..107208 | + | 747 | WP_029463970.1 | Ig domain-containing protein | - |
| AFK64_RS20585 () | 107269..107586 | + | 318 | WP_029590306.1 | hypothetical protein | - |
| AFK64_RS20590 () | 107712..107936 | + | 225 | WP_161574044.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|