MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47712 bp
Accession: NZ_CP012189 Location: 1..47712 Organism: Lacticaseibacillus paracasei strain CAUH35 Replicon: plasmid unnamed2
Accession: NZ_CP012189 Location: 1..47712 Organism: Lacticaseibacillus paracasei strain CAUH35 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AKG30_RS13975 () | 17..970 | - | 954 | Protein_1 | D-2-hydroxyacid dehydrogenase | - |
| AKG30_RS13980 () | 985..1515 | - | 531 | WP_016386160.1 | hypothetical protein | - |
| AKG30_RS15985 () | 1570..2358 | - | 789 | Protein_3 | IS5 family transposase ISCARN82 | Transposase |
| AKG30_RS13995 () | 2516..3073 | - | 558 | WP_003586333.1 | Serine acetyltransferase | VF |
| AKG30_RS14000 () | 3039..4223 | - | 1185 | WP_003586331.1 | PLP-dependent aspartate aminotransferase family protein | - |
| AKG30_RS14005 () | 4245..5156 | - | 912 | WP_003603806.1 | cysteine synthase family protein | - |
| AKG30_RS14010 () | 5768..6697 | - | 930 | WP_050894563.1 | IS30 family transposase ISLpl1 | Transposase |
| AKG30_RS14015 () | 6989..9049 | - | 2061 | WP_050894564.1 | Mobilization protein A | Relaxase |
| AKG30_RS14020 () | 9300..9527 | + | 228 | WP_080633844.1 | hypothetical protein | - |
| AKG30_RS14025 () | 9550..9828 | + | 279 | WP_033615047.1 | hypothetical protein | - |
| AKG30_RS15995 () | 9944..10482 | + | 539 | Protein_11 | IS5 family transposase ISStma16 | Transposase |
| AKG30_RS16000 () | 10544..11331 | + | 788 | WP_094515910.1 | IS5 family transposase ISCaa8 | Transposase |
| AKG30_RS16415 () | 11340..11591 | + | 252 | Protein_13 | transposase | - |
| AKG30_RS14050 () | 11882..12790 | - | 909 | WP_003603786.1 | magnesium transporter CorA family protein | - |
| AKG30_RS14055 () | 12947..13201 | - | 255 | Protein_15 | divalent metal cation transporter | - |
| AKG30_RS16420 () | 13215..14013 | - | 799 | Protein_16 | IS5 family transposase | - |
| AKG30_RS14070 () | 14084..14548 | - | 465 | WP_050894567.1 | hypothetical protein | - |
| AKG30_RS14075 () | 14538..14819 | - | 282 | WP_002819873.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| AKG30_RS14080 () | 15079..15444 | - | 366 | Protein_19 | plasmid replication initiation protein | - |
| AKG30_RS14095 () | 16378..17853 | - | 1476 | WP_050894569.1 | primase C-terminal domain-containing protein | - |
| AKG30_RS14105 () | 18567..19448 | + | 882 | WP_003582592.1 | Chromosome partitioning protein ParA | VF |
| AKG30_RS14110 () | 19441..19827 | + | 387 | WP_003582590.1 | hypothetical protein | - |
| AKG30_RS14125 () | 21269..21826 | - | 558 | WP_003567312.1 | hypothetical protein | - |
| AKG30_RS14130 () | 21921..22790 | - | 870 | WP_050894570.1 | DUF2075 domain-containing protein | - |
| AKG30_RS14135 () | 22890..23819 | + | 930 | WP_050894571.1 | IS30 family transposase ISLpl1 | Transposase |
| AKG30_RS14140 () | 23941..24450 | + | 510 | WP_003600616.1 | DUF308 domain-containing protein | - |
| AKG30_RS14145 () | 24651..25571 | - | 921 | WP_155467377.1 | IS30 family transposase ISLpl1 | Transposase |
| AKG30_RS14150 () | 25685..26860 | - | 1176 | WP_003600772.1 | IS256 family transposase IS1310 | Transposase |
| AKG30_RS16035 () | 27055..27345 | + | 291 | Protein_31 | IS30 family transposase ISLpl1 | Transposase |
| AKG30_RS14155 () | 27477..28894 | + | 1418 | Protein_32 | IS5 family transposase ISLrh3 | Transposase |
| AKG30_RS14160 () | 28964..29914 | - | 951 | WP_003592282.1 | LacI family transcriptional regulator | - |
| AKG30_RS14165 () | 30066..31403 | + | 1338 | WP_003603890.1 | SLC45 family MFS transporter | - |
| AKG30_RS14170 () | 31430..33109 | + | 1680 | WP_050894573.1 | alpha-glucosidase | - |
| AKG30_RS14180 () | 33512..34674 | + | 1163 | WP_155467384.1 | IS3 family transposase ISL1 | Transposase |
| AKG30_RS14185 () | 35940..36266 | - | 327 | WP_050894574.1 | DUF3892 domain-containing protein | - |
| AKG30_RS14190 () | 36431..37066 | - | 636 | WP_050894575.1 | IS6 family transposase ISBth20 | Transposase |
| AKG30_RS16055 () | 37167..37502 | + | 336 | WP_080988372.1 | TIR domain-containing protein | - |
| AKG30_RS14195 () | 37422..38837 | - | 1416 | WP_050893464.1 | IS5 family transposase ISLca2 | Transposase |
| AKG30_RS14205 () | 39353..40624 | + | 1272 | WP_050894577.1 | hypothetical protein | - |
| AKG30_RS16430 () | 40728..40949 | - | 222 | Protein_42 | IS30 family transposase ISLpl1 | Transposase |
| AKG30_RS14210 () | 41197..41565 | + | 369 | WP_003582572.1 | YxeA family protein | - |
| AKG30_RS14215 () | 41693..41935 | + | 243 | WP_016363783.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| AKG30_RS14220 () | 41928..42209 | + | 282 | WP_050894578.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| AKG30_RS14225 () | 42362..42733 | + | 372 | Protein_46 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| AKG30_RS14230 () | 43127..44806 | - | 1680 | WP_050894579.1 | D-lactate dehydrogenase | - |
| AKG30_RS14235 () | 45066..45749 | - | 684 | WP_050894580.1 | IS6 family transposase ISBth20 | Transposase |
| AKG30_RS14240 () | 45933..46691 | - | 759 | WP_016385700.1 | NADPH-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|