MGE detailed information
MGE type: IScluster/Tn MGE length: 5113 bp
Accession: NZ_CP012180 Location: 416..5528 Organism: Pseudomonas syringae pv. actinidiae ICMP 18708 Replicon: plasmid unnamed
Accession: NZ_CP012180 Location: 416..5528 Organism: Pseudomonas syringae pv. actinidiae ICMP 18708 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZ708_RS29365 () | 80..1147 | + | 1068 | WP_074556923.1 | IS630 family transposase ISPsy32 | Transposase |
| NZ708_RS29370 () | 1345..2307 | - | 963 | WP_017685121.1 | tyrosine-type recombinase/integrase | - |
| NZ708_RS29375 () | 2648..2896 | + | 249 | WP_017685122.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NZ708_RS29380 () | 2912..3262 | + | 351 | WP_017685123.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NZ708_RS32885 () | 3394..3978 | - | 585 | Protein_4 | Oxygen regulatory protein NreC | VF |
| NZ708_RS29405 () | 5685..5990 | + | 306 | WP_017706770.1 | type IV secretion system protein | - |
| NZ708_RS29410 () | 5980..6789 | + | 810 | WP_017684942.1 | P-type conjugative transfer protein VirB9 | - |
| NZ708_RS29415 () | 6776..8146 | + | 1371 | WP_017684943.1 | TrbI/VirB10 family protein | - |
| NZ708_RS29420 () | 8156..9187 | + | 1032 | WP_017684944.1 | P-type DNA transfer ATPase VirB11 | - |
| NZ708_RS29425 () | 9197..9553 | + | 357 | WP_017684945.1 | hypothetical protein | - |
| NZ708_RS29430 () | 9802..10425 | + | 624 | WP_017684946.1 | glycoside hydrolase family 25 protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|