MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 74432 bp
Accession: NZ_CP012180 Location: 1..74432 Organism: Pseudomonas syringae pv. actinidiae ICMP 18708 Replicon: plasmid unnamed
Accession: NZ_CP012180 Location: 1..74432 Organism: Pseudomonas syringae pv. actinidiae ICMP 18708 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZ708_RS29365 () | 80..1147 | + | 1068 | WP_074556923.1 | IS630 family transposase ISPsy32 | Transposase |
| NZ708_RS29370 () | 1345..2307 | - | 963 | WP_017685121.1 | tyrosine-type recombinase/integrase | - |
| NZ708_RS29375 () | 2648..2896 | + | 249 | WP_017685122.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NZ708_RS29380 () | 2912..3262 | + | 351 | WP_017685123.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NZ708_RS32885 () | 3394..3978 | - | 585 | Protein_4 | Oxygen regulatory protein NreC | VF |
| NZ708_RS29405 () | 5685..5990 | + | 306 | WP_017706770.1 | hypothetical protein | VF |
| NZ708_RS29410 () | 5980..6789 | + | 810 | WP_017684942.1 | P-type conjugative transfer protein VirB9 | - |
| NZ708_RS29415 () | 6776..8146 | + | 1371 | WP_017684943.1 | Type IV secretion system protein virB10 | VF |
| NZ708_RS29420 () | 8156..9187 | + | 1032 | WP_017684944.1 | Type IV secretion system protein VirB11 | VF |
| NZ708_RS29425 () | 9197..9553 | + | 357 | WP_017684945.1 | hypothetical protein | - |
| NZ708_RS29430 () | 9802..10425 | + | 624 | WP_017684946.1 | glycoside hydrolase family 25 protein | - |
| NZ708_RS29435 () | 10871..11101 | + | 231 | WP_017684963.1 | hypothetical protein | - |
| NZ708_RS29440 () | 11101..12753 | + | 1653 | WP_017684962.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NZ708_RS29445 () | 12794..13156 | + | 363 | WP_015060690.1 | IncN plasmid killer protein | - |
| NZ708_RS29450 () | 13184..15082 | + | 1899 | WP_017684961.1 | DNA topoisomerase III | - |
| NZ708_RS29455 () | 15105..18134 | - | 3030 | WP_017682807.1 | Tn3 family transposase ISPsy42 | Transposase |
| NZ708_RS29460 () | 18163..18735 | - | 573 | WP_004666660.1 | Tn3 family transposase ISPsy42 | Transposase |
| NZ708_RS29465 () | 18915..19166 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NZ708_RS29470 () | 19163..19558 | + | 396 | WP_004666661.1 | type II toxin-antitoxin system VapC family toxin | - |
| NZ708_RS29475 () | 19719..20096 | - | 378 | WP_004666662.1 | hypothetical protein | - |
| NZ708_RS29480 () | 20164..20400 | - | 237 | Protein_21 | Tn3 family transposase ISPsy42 | Transposase |
| NZ708_RS29485 () | 20859..22490 | - | 1632 | WP_020358614.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| NZ708_RS32905 () | 22664..23209 | + | 546 | Protein_23 | IS5 family transposase ISPsy19 | Transposase |
| NZ708_RS29495 () | 24240..24617 | + | 378 | WP_003344294.1 | hypothetical protein | - |
| NZ708_RS29500 () | 24664..25500 | + | 837 | WP_017684524.1 | DUF945 domain-containing protein | - |
| NZ708_RS29505 () | 25568..25768 | + | 201 | WP_017684525.1 | hypothetical protein | - |
| NZ708_RS29510 () | 25834..26112 | - | 279 | WP_017684526.1 | hypothetical protein | - |
| NZ708_RS29515 () | 26410..26754 | - | 345 | WP_017684528.1 | hypothetical protein | - |
| NZ708_RS29520 () | 27000..27329 | + | 330 | WP_003344297.1 | ribbon-helix-helix protein, CopG family | - |
| NZ708_RS29525 () | 27340..29295 | + | 1956 | WP_017684529.1 | Protein TraI | Relaxase |
| NZ708_RS29535 () | 29590..30432 | - | 843 | WP_005734710.1 | Transcriptional activator protein LasR | VF |
| NZ708_RS29540 () | 30490..31083 | - | 594 | WP_005734709.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| NZ708_RS29545 () | 31080..32546 | - | 1467 | WP_005734708.1 | 2-amino-4-deoxychorismate synthase | VF |
| NZ708_RS29550 () | 33176..34528 | + | 1353 | WP_017684531.1 | phenylacetate--CoA ligase family protein | - |
| NZ708_RS29555 () | 34535..35080 | + | 546 | WP_005734707.1 | hypothetical protein | - |
| NZ708_RS29560 () | 35082..35765 | + | 684 | WP_003319174.1 | iron-containing redox enzyme family protein | - |
| NZ708_RS29565 () | 35769..36386 | + | 618 | WP_017699540.1 | flavodoxin family protein | - |
| NZ708_RS29570 () | 36389..37297 | + | 909 | WP_017685046.1 | EamA family transporter | - |
| NZ708_RS29575 () | 37284..38234 | + | 951 | WP_017685047.1 | alpha/beta fold hydrolase | - |
| NZ708_RS29580 () | 39211..40503 | - | 1293 | WP_017685048.1 | glycoside hydrolase family 68 protein | - |
| NZ708_RS29585 () | 40771..41391 | + | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NZ708_RS32935 () | 41410..41706 | - | 297 | WP_017685207.1 | hypothetical protein | - |
| NZ708_RS29600 () | 42357..45731 | + | 3375 | WP_017684689.1 | hypothetical protein | VF |
| NZ708_RS29605 () | 45759..46181 | + | 423 | WP_017684688.1 | hypothetical protein | - |
| NZ708_RS29610 () | 46202..46765 | + | 564 | WP_010206573.1 | hypothetical protein | - |
| NZ708_RS29615 () | 46953..47381 | + | 429 | WP_017684687.1 | GntR family transcriptional regulator | - |
| NZ708_RS29620 () | 47461..47688 | + | 228 | WP_017684686.1 | hypothetical protein | - |
| NZ708_RS29625 () | 48086..49399 | + | 1314 | WP_017684685.1 | replication initiation protein | - |
| NZ708_RS29630 () | 49611..49925 | + | 315 | WP_017684684.1 | HU family DNA-binding protein | - |
| NZ708_RS29635 () | 50519..51037 | + | 519 | WP_017684683.1 | DUF4113 domain-containing protein | - |
| NZ708_RS29640 () | 51049..51270 | + | 222 | WP_017684682.1 | hypothetical protein | - |
| NZ708_RS29645 () | 51724..52161 | + | 438 | WP_074291445.1 | DUF4113 domain-containing protein | - |
| NZ708_RS29650 () | 52737..52988 | - | 252 | WP_020316509.1 | ribbon-helix-helix protein, CopG family | - |
| NZ708_RS29655 () | 53096..53752 | - | 657 | WP_017685030.1 | AAA family ATPase | - |
| NZ708_RS34655 () | 53868..54023 | + | 156 | WP_153303633.1 | hypothetical protein | - |
| NZ708_RS29665 () | 54587..55135 | - | 549 | WP_017685033.1 | hypothetical protein | - |
| NZ708_RS29670 () | 55232..55693 | + | 462 | WP_020365478.1 | SOS response-associated peptidase family protein | - |
| NZ708_RS29675 () | 55963..56736 | - | 774 | Protein_58 | type III effector | - |
| NZ708_RS29680 () | 56840..57442 | - | 603 | Protein_59 | type III effector | - |
| NZ708_RS29685 () | 57817..60261 | + | 2445 | WP_017685035.1 | hypothetical protein | - |
| NZ708_RS32945 () | 60405..60629 | - | 225 | Protein_61 | transposase | - |
| NZ708_RS29690 () | 61370..61615 | + | 246 | WP_017685036.1 | hypothetical protein | - |
| NZ708_RS29695 () | 62170..62586 | + | 417 | WP_017685037.1 | hypothetical protein | - |
| NZ708_RS29700 () | 62624..62854 | + | 231 | WP_017685038.1 | hypothetical protein | - |
| NZ708_RS29705 () | 62944..63483 | + | 540 | WP_017685039.1 | hypothetical protein | - |
| NZ708_RS29720 () | 65711..65890 | + | 180 | WP_017685223.1 | hypothetical protein | - |
| NZ708_RS29725 () | 66159..66383 | + | 225 | WP_017699623.1 | carbon storage regulator | - |
| NZ708_RS29730 () | 66413..66826 | + | 414 | WP_017685173.1 | TraR/DksA family transcriptional regulator | - |
| NZ708_RS29735 () | 66864..67085 | + | 222 | WP_004666801.1 | hypothetical protein | - |
| NZ708_RS29745 () | 67411..68031 | - | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NZ708_RS29750 () | 68419..68829 | + | 411 | Protein_72 | ParA family protein | - |
| NZ708_RS29765 () | 70352..70891 | - | 540 | WP_017685167.1 | hypothetical protein | - |
| NZ708_RS29770 () | 71296..71550 | - | 255 | WP_003381350.1 | hypothetical protein | - |
| NZ708_RS32965 () | 71577..71837 | - | 261 | Protein_76 | hypothetical protein | - |
| NZ708_RS32970 () | 71899..73076 | + | 1178 | WP_164706461.1 | IS3 family transposase ISPsy28 | Transposase |
| NZ708_RS29785 () | 73098..73436 | - | 339 | WP_017685230.1 | hypothetical protein | - |
| NZ708_RS34660 () | 73573..73860 | - | 288 | WP_153303634.1 | hypothetical protein | - |
| NZ708_RS29790 () | 73942..74334 | - | 393 | WP_017685201.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|