MGE detailed information
MGE type: Genomic_island MGE length: 58832 bp
Accession: NZ_CP012179 Location: 729368..788199 Organism: Pseudomonas syringae pv. actinidiae ICMP 18708 Replicon: chromosome
Accession: NZ_CP012179 Location: 729368..788199 Organism: Pseudomonas syringae pv. actinidiae ICMP 18708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZ708_RS03515 () | 726376..726927 | - | 552 | WP_017684234.1 | DUF4123 domain-containing protein | - |
| NZ708_RS03520 () | 726924..728990 | - | 2067 | WP_017684235.1 | type VI secretion system tip protein VgrG | - |
| NZ708_RS03525 () | 729488..730711 | + | 1224 | WP_003379982.1 | type III secretion system effector protein | - |
| NZ708_RS03530 () | 730828..732360 | - | 1533 | WP_017684236.1 | hypothetical protein | - |
| NZ708_RS03535 () | 733504..733740 | - | 237 | WP_017684237.1 | carbon storage regulator | - |
| NZ708_RS03540 () | 733942..734520 | - | 579 | WP_017684238.1 | AAA family ATPase | - |
| NZ708_RS03545 () | 734520..735176 | - | 657 | WP_032609899.1 | hypothetical protein | - |
| NZ708_RS03550 () | 735213..736415 | - | 1203 | WP_017684239.1 | aspartate aminotransferase family protein | - |
| NZ708_RS03555 () | 736456..737490 | - | 1035 | WP_017684240.1 | sulfotransferase | - |
| NZ708_RS03560 () | 737508..738428 | - | 921 | WP_020313563.1 | TauD/TfdA family dioxygenase | - |
| NZ708_RS03565 () | 738574..739221 | - | 648 | WP_017703697.1 | histidine phosphatase family protein | - |
| NZ708_RS03570 () | 739562..740497 | - | 936 | WP_017704392.1 | syringolide biosynthetic protein AvrD1 | - |
| NZ708_RS03575 () | 740772..741405 | - | 634 | Protein_698 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NZ708_RS03580 () | 741446..741865 | - | 420 | WP_017684243.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NZ708_RS03585 () | 741862..742119 | - | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| NZ708_RS03590 () | 742474..743130 | + | 657 | WP_017684244.1 | hypothetical protein | - |
| NZ708_RS03595 () | 743178..743432 | + | 255 | WP_003381350.1 | hypothetical protein | - |
| NZ708_RS30100 () | 744249..745211 | - | 963 | WP_003383614.1 | type III effector | - |
| NZ708_RS03610 () | 746581..747648 | + | 1068 | WP_074556883.1 | IS630 family transposase ISPsy32 | Transposase |
| NZ708_RS03615 () | 747859..748401 | + | 543 | WP_078983215.1 | YopT-type cysteine protease domain-containing protein | - |
| NZ708_RS30110 () | 748440..748628 | + | 189 | Protein_706 | helix-turn-helix domain-containing protein | - |
| NZ708_RS03620 () | 748692..748859 | + | 168 | Protein_707 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| NZ708_RS03625 () | 748961..750028 | + | 1068 | WP_032685463.1 | IS630 family transposase ISPsy32 | Transposase |
| NZ708_RS03630 () | 750114..750500 | + | 387 | WP_017685026.1 | CesT family type III secretion system chaperone | - |
| NZ708_RS03635 () | 750600..751637 | + | 1038 | WP_110455589.1 | hypothetical protein | - |
| NZ708_RS03640 () | 752107..752667 | + | 561 | WP_005782565.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| NZ708_RS03645 () | 752651..754309 | + | 1659 | WP_017685028.1 | IS481 family transposase ISAzs36 | Transposase |
| NZ708_RS03650 () | 754299..755270 | + | 972 | WP_017685029.1 | ExeA family protein | - |
| NZ708_RS03655 () | 755548..756615 | + | 1068 | WP_074556885.1 | IS630 family transposase ISPsy32 | Transposase |
| NZ708_RS30125 () | 756752..757408 | + | 657 | WP_004666980.1 | YopT-type cysteine protease domain-containing protein | - |
| NZ708_RS30130 () | 757302..757705 | - | 404 | Protein_716 | recombinase family protein | - |
| NZ708_RS03660 () | 757926..758204 | - | 279 | Protein_717 | IS91 family transposase IS801 | Transposase |
| NZ708_RS03665 () | 758398..758793 | + | 396 | WP_017685097.1 | CesT family type III secretion system chaperone | - |
| NZ708_RS33155 () | 758806..759648 | + | 843 | WP_074291504.1 | type III effector HopF2 | - |
| NZ708_RS34695 () | 760571..761101 | + | 531 | WP_005752338.1 | hypothetical protein | - |
| NZ708_RS03685 () | 761524..762120 | + | 597 | WP_003381935.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| NZ708_RS03690 () | 762110..762268 | + | 159 | WP_003381934.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| NZ708_RS03695 () | 762311..762691 | + | 381 | WP_017684874.1 | hypothetical protein | - |
| NZ708_RS03700 () | 762706..762957 | + | 252 | WP_017684873.1 | hypothetical protein | - |
| NZ708_RS03705 () | 763168..763392 | + | 225 | WP_003407134.1 | carbon storage regulator | - |
| NZ708_RS03710 () | 763575..763805 | + | 231 | WP_017684872.1 | hypothetical protein | - |
| NZ708_RS03715 () | 763932..764804 | + | 873 | WP_017684871.1 | DUF3800 domain-containing protein | - |
| NZ708_RS03720 () | 765489..766508 | - | 1020 | WP_017684870.1 | tyrosine phosphatase | - |
| NZ708_RS03725 () | 766915..767307 | + | 393 | WP_017684869.1 | CesT family type III secretion system chaperone | - |
| NZ708_RS30150 () | 767324..768166 | + | 843 | WP_020362659.1 | type III effector HopF2 | - |
| NZ708_RS03735 () | 769031..769585 | + | 555 | WP_003381924.1 | hypothetical protein | - |
| NZ708_RS03740 () | 770481..771236 | - | 756 | WP_017699032.1 | IS21 family transposase ISPsy41 | Transposase |
| NZ708_RS03745 () | 771257..772771 | - | 1515 | WP_051120727.1 | IS21 family transposase ISPsy41 | Transposase |
| NZ708_RS03755 () | 773101..773895 | - | 795 | WP_017685181.1 | hypothetical protein | - |
| NZ708_RS03760 () | 774852..775919 | - | 1068 | WP_032685463.1 | IS630 family transposase ISPsy32 | Transposase |
| NZ708_RS03765 () | 776064..777371 | + | 1308 | WP_017684148.1 | hypothetical protein | - |
| NZ708_RS03770 () | 777516..778439 | - | 924 | WP_017684147.1 | hypothetical protein | - |
| NZ708_RS03775 () | 779094..779339 | - | 246 | WP_017684146.1 | Polyketide synthase PksN | VF |
| NZ708_RS03780 () | 779375..780424 | - | 1050 | WP_017684145.1 | LLM class flavin-dependent oxidoreductase | - |
| NZ708_RS03785 () | 780501..785966 | - | 5466 | WP_017684144.1 | Chondramide synthase cmdD | VF |
| NZ708_RS03790 () | 786622..787896 | + | 1275 | WP_017684143.1 | MFS transporter | - |
| NZ708_RS03795 () | 787978..788199 | + | 222 | WP_017684142.1 | Protein MbtH | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|