MGE detailed information
MGE type: IScluster/Tn MGE length: 68713 bp
Accession: NZ_CP012142 Location: 32083..100795 Organism: Shigella flexneri 4c strain 1205 Replicon: plasmid 1205p2
Accession: NZ_CP012142 Location: 32083..100795 Organism: Shigella flexneri 4c strain 1205 Replicon: plasmid 1205p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AD871_RS26710 (AD871_26885) | 28154..29134 | + | 981 | WP_000431558.1 | ParB family protein | - |
| AD871_RS26715 (AD871_26890) | 29390..29875 | + | 486 | WP_000003223.1 | IS110 family transposase | - |
| AD871_RS26720 (AD871_26895) | 29902..30081 | - | 180 | Protein_42 | transposase domain-containing protein | - |
| AD871_RS26725 (AD871_26900) | 30164..31291 | - | 1128 | WP_014526552.1 | group II intron reverse transcriptase/maturase | - |
| AD871_RS30825 | 31213..31551 | + | 339 | WP_227804374.1 | hypothetical protein | - |
| AD871_RS26730 (AD871_26905) | 31867..32046 | - | 180 | Protein_45 | IS66 family transposase | - |
| AD871_RS29680 | 32083..33292 | - | 1210 | Protein_46 | IS3 family transposase | - |
| AD871_RS26755 (AD871_26930) | 33349..33645 | - | 297 | Protein_47 | DDE-type integrase/transposase/recombinase | - |
| AD871_RS26760 (AD871_26935) | 33761..33949 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| AD871_RS26765 (AD871_26940) | 33959..35158 | + | 1200 | WP_000947175.1 | IS91 family transposase ISSbo1 | Transposase |
| AD871_RS26775 (AD871_26950) | 35331..36085 | - | 755 | Protein_50 | IS3 family transposase IS150 | Transposase |
| AD871_RS26780 (AD871_26955) | 36096..36455 | + | 360 | Protein_51 | IS21 family transposase IS100 | Transposase |
| AD871_RS26785 (AD871_26960) | 36448..37236 | - | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| AD871_RS26790 (AD871_26965) | 37665..38066 | + | 402 | Protein_53 | IS3 family transposase ISEc48 | Transposase |
| AD871_RS26795 (AD871_26970) | 38248..38514 | + | 267 | WP_000957712.1 | hypothetical protein | VF |
| AD871_RS26800 (AD871_26975) | 38704..39401 | + | 698 | WP_227804301.1 | IS1 family transposase IS1X2 | Transposase |
| AD871_RS26805 (AD871_26980) | 39662..40858 | - | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| AD871_RS26810 (AD871_26985) | 41194..42885 | + | 1692 | WP_000597733.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| AD871_RS29685 | 42937..44145 | + | 1209 | Protein_58 | IS3 family transposase | - |
| AD871_RS29690 | 44188..44711 | - | 524 | Protein_59 | IS3 family transposase ISSfl11 | Transposase |
| AD871_RS26835 (AD871_27010) | 44779..45261 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AD871_RS26840 (AD871_27015) | 45252..45554 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AD871_RS26845 (AD871_27020) | 45826..46098 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| AD871_RS26850 (AD871_27025) | 46079..47287 | + | 1209 | WP_000198552.1 | IS91 family transposase ISSbo1 | Transposase |
| AD871_RS29695 | 47459..47587 | + | 129 | Protein_64 | IS5 family transposase ISSfl7 | Transposase |
| AD871_RS26855 (AD871_27030) | 47736..49190 | - | 1455 | WP_000701108.1 | hypothetical protein | VF |
| AD871_RS26860 (AD871_27035) | 49594..50213 | + | 620 | Protein_66 | IS1 family transposase IS1X2 | Transposase |
| AD871_RS29700 | 50263..51472 | + | 1210 | Protein_67 | IS3 family transposase | - |
| AD871_RS29705 | 51516..51926 | + | 411 | Protein_68 | IS66 family transposase ISEc23 | Transposase |
| AD871_RS26885 (AD871_27060) | 51958..52572 | + | 615 | Protein_69 | IS21 family transposase ISEc10 | Transposase |
| AD871_RS26890 (AD871_27065) | 52741..56835 | - | 4095 | WP_001034121.1 | Serine protease SepA autotransporter | VF |
| AD871_RS26900 (AD871_27075) | 57237..57425 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| AD871_RS26905 (AD871_27080) | 57435..58633 | + | 1199 | WP_094081567.1 | IS91 family transposase ISSbo1 | Transposase |
| AD871_RS29710 | 58846..59654 | + | 809 | WP_094096897.1 | IS5 family transposase ISSfl7 | Transposase |
| AD871_RS26925 (AD871_27100) | 59769..60800 | + | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| AD871_RS29715 | 60994..61684 | + | 691 | Protein_75 | IS1 family transposase | - |
| AD871_RS29720 | 61701..61880 | - | 180 | Protein_76 | transposase | - |
| AD871_RS26945 (AD871_27120) | 62209..63906 | + | 1698 | WP_010921637.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| AD871_RS26950 (AD871_27125) | 64334..66058 | + | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| AD871_RS29725 | 66110..67318 | + | 1209 | Protein_79 | IS3 family transposase | - |
| AD871_RS30245 | 67362..67574 | - | 213 | Protein_80 | DDE-type integrase/transposase/recombinase | - |
| AD871_RS26970 (AD871_27145) | 67849..68124 | + | 276 | WP_227804373.1 | S-type pyocin domain-containing protein | - |
| AD871_RS26975 (AD871_27150) | 68322..69686 | + | 1365 | WP_000051931.1 | MFS transporter | - |
| AD871_RS26980 (AD871_27155) | 69736..69945 | + | 210 | Protein_83 | peptidoglycan-binding protein | - |
| AD871_RS26985 (AD871_27160) | 70039..70230 | - | 192 | Protein_84 | IS21 family transposase IS100 | Transposase |
| AD871_RS29735 | 70271..70768 | - | 498 | Protein_85 | IS66 family transposase ISEc47 | Transposase |
| AD871_RS29745 | 70871..72079 | - | 1209 | Protein_86 | IS3 family transposase | - |
| AD871_RS27005 (AD871_27185) | 72259..72993 | + | 735 | Protein_87 | IS21 family transposase IS100kyp | Transposase |
| AD871_RS27020 (AD871_27200) | 74557..74829 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| AD871_RS29750 | 74996..75115 | - | 120 | Protein_90 | IS66 family transposase ISCro1 | Transposase |
| AD871_RS27025 (AD871_27205) | 75232..76929 | - | 1698 | WP_024259347.1 | hypothetical protein | VF |
| AD871_RS29755 | 77005..77154 | + | 150 | Protein_92 | IS1 family transposase | - |
| AD871_RS27030 (AD871_27210) | 77258..78670 | - | 1413 | WP_001026857.1 | hypothetical protein | VF |
| AD871_RS29760 | 79120..79182 | + | 63 | Protein_94 | IS66 family transposase ISCro1 | Transposase |
| AD871_RS27035 (AD871_27215) | 79203..79424 | - | 222 | Protein_95 | IS66 family transposase ISCro1 | Transposase |
| AD871_RS27040 (AD871_27220) | 79567..79760 | - | 194 | Protein_96 | HNH endonuclease | - |
| AD871_RS27055 (AD871_27240) | 80964..81437 | - | 474 | WP_005038443.1 | CFA/I fimbrial subunit D | VF |
| AD871_RS27060 (AD871_27245) | 81688..82884 | + | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| AD871_RS29770 | 82879..83303 | - | 425 | Protein_100 | hypothetical protein | - |
| AD871_RS27065 (AD871_27250) | 83531..84169 | - | 639 | WP_000502854.1 | ParB N-terminal domain-containing protein | - |
| AD871_RS29775 | 84154..84297 | - | 144 | Protein_102 | DUF3440 domain-containing protein | - |
| AD871_RS29780 | 86901..87182 | + | 282 | Protein_105 | IS4 family transposase ISSfl1 | Transposase |
| AD871_RS27090 (AD871_27275) | 87355..87840 | - | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AD871_RS27095 (AD871_27280) | 87828..88112 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AD871_RS30250 (AD871_27290) | 89014..89178 | + | 165 | WP_001346193.1 | hypothetical protein | - |
| AD871_RS27110 (AD871_27295) | 89432..91033 | - | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| AD871_RS27115 (AD871_27300) | 91030..91380 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| AD871_RS27120 (AD871_27305) | 91377..92051 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| AD871_RS27125 (AD871_27310) | 92624..94078 | + | 1455 | WP_015683184.1 | hypothetical protein | VF |
| AD871_RS27135 (AD871_27320) | 94416..95480 | + | 1065 | Protein_113 | IS3 family transposase IS600 | Transposase |
| AD871_RS29785 | 95521..96324 | + | 804 | Protein_114 | IS3 family transposase ISKpn38 | Transposase |
| AD871_RS30830 (AD871_27335) | 96439..96780 | + | 342 | Protein_115 | IS21 family transposase ISEc62 | Transposase |
| AD871_RS27155 (AD871_27340) | 96763..97600 | + | 838 | Protein_116 | IS21 family transposase ISEc62 | Transposase |
| AD871_RS27160 (AD871_27345) | 97650..98846 | - | 1197 | WP_005119583.1 | IS110 family transposase ISSfl4 | Transposase |
| AD871_RS27165 (AD871_27350) | 99038..100042 | - | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| AD871_RS30835 | 100389..101198 | + | 810 | Protein_119 | IS110 family transposase | - |
| AD871_RS27175 (AD871_27360) | 101395..102174 | + | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| AD871_RS27180 (AD871_27365) | 103121..104050 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| AD871_RS27185 (AD871_27370) | 104267..104503 | - | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|