MGE detailed information
MGE type: IScluster/Tn MGE length: 21871 bp
Accession: NZ_CP012142 Location: 164359..186229 Organism: Shigella flexneri 4c strain 1205 Replicon: plasmid 1205p2
Accession: NZ_CP012142 Location: 164359..186229 Organism: Shigella flexneri 4c strain 1205 Replicon: plasmid 1205p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AD871_RS27545 (AD871_27735) | 160580..161482 | + | 903 | WP_015683198.1 | DUF1281 domain-containing protein | - |
| AD871_RS27550 (AD871_27740) | 161479..161790 | + | 312 | WP_011114770.1 | hypothetical protein | - |
| AD871_RS27555 (AD871_27745) | 161854..162537 | + | 684 | WP_025745099.1 | DNA methylase | - |
| AD871_RS27560 (AD871_27750) | 162538..162759 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| AD871_RS27565 (AD871_27755) | 162719..163205 | + | 487 | Protein_192 | DUF1380 domain-containing protein | - |
| AD871_RS27570 (AD871_27760) | 163250..164020 | + | 771 | WP_001006196.1 | hypothetical protein | - |
| AD871_RS27575 (AD871_27765) | 164359..165078 | - | 720 | Protein_194 | IS110 family transposase ISSfl8 | Transposase |
| AD871_RS27580 (AD871_27770) | 165087..166148 | - | 1062 | Protein_195 | IS66 family transposase ISSfl3 | Transposase |
| AD871_RS27595 (AD871_27785) | 167404..167955 | - | 552 | Protein_197 | IS66 family transposase ISSfl3 | Transposase |
| AD871_RS27600 (AD871_27790) | 167952..168302 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| AD871_RS27605 (AD871_27795) | 168299..168973 | - | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| AD871_RS29860 | 169172..169642 | + | 471 | Protein_200 | IS1 family transposase IS1N | Transposase |
| AD871_RS30270 (AD871_27805) | 169801..170439 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| AD871_RS27625 (AD871_27810) | 170554..170823 | + | 270 | Protein_202 | IS3 family transposase ISEc48 | Transposase |
| AD871_RS27635 (AD871_27820) | 170911..171953 | + | 1043 | Protein_203 | IS3 family transposase IS2 | Transposase |
| AD871_RS27640 (AD871_27825) | 172033..172707 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| AD871_RS27645 (AD871_27830) | 172704..173051 | + | 348 | WP_000631708.1 | IS66 family transposase ISSfl3 | Transposase |
| AD871_RS27650 (AD871_27835) | 173071..174672 | + | 1602 | WP_011110603.1 | IS66 family transposase ISSfl3 | Transposase |
| AD871_RS27655 (AD871_27840) | 174861..175046 | + | 186 | Protein_207 | IS21 family transposase IS100 | Transposase |
| AD871_RS27660 (AD871_27845) | 175146..175355 | - | 210 | Protein_208 | peptidoglycan-binding protein | - |
| AD871_RS27665 (AD871_27850) | 175405..175656 | - | 252 | WP_015683204.1 | transporter | - |
| AD871_RS27670 (AD871_27855) | 176108..176392 | + | 285 | WP_011114774.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AD871_RS27675 (AD871_27860) | 176392..176667 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AD871_RS29870 | 177646..178599 | + | 954 | Protein_213 | IS66 family transposase ISEc49 | Transposase |
| AD871_RS27710 (AD871_27895) | 179135..179353 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AD871_RS27715 (AD871_27900) | 179355..179660 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AD871_RS27720 (AD871_27905) | 180053..181690 | + | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| AD871_RS27725 (AD871_27910) | 181898..182167 | + | 270 | Protein_217 | type II toxin-antitoxin system antitoxin YacA | - |
| AD871_RS30855 | 182167..182336 | + | 170 | Protein_218 | type II toxin-antitoxin system toxin YacB | - |
| AD871_RS27730 (AD871_27915) | 182419..183009 | + | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| AD871_RS30275 (AD871_27925) | 183366..183632 | + | 267 | Protein_220 | IS66 family transposase ISCro1 | Transposase |
| AD871_RS27745 (AD871_27930) | 183695..184963 | + | 1269 | Protein_221 | IS4 family transposase IS4 | Transposase |
| AD871_RS29880 | 185020..186229 | + | 1210 | Protein_222 | IS3 family transposase | - |
| AD871_RS30860 | 186270..186350 | + | 81 | Protein_223 | hypothetical protein | - |
| AD871_RS30280 (AD871_27950) | 186364..186555 | - | 192 | Protein_224 | IS66 family insertion sequence element accessory protein TnpB | - |
| AD871_RS27770 (AD871_27955) | 186553..186877 | + | 325 | Protein_225 | IS3 family transposase | - |
| AD871_RS27775 (AD871_27960) | 186907..189819 | - | 2913 | WP_011114777.1 | ankyrin repeat domain-containing protein | - |
| AD871_RS29885 | 189822..189938 | + | 117 | WP_004996477.1 | hypothetical protein | - |
| AD871_RS27780 (AD871_27965) | 190302..191144 | + | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|