MGE detailed information
MGE type: Prophage MGE length: 19122 bp
Accession: NZ_CP012140 Location: 1654707..1673828 Organism: Shigella flexneri 4c strain 1205 Replicon: chromosome
Accession: NZ_CP012140 Location: 1654707..1673828 Organism: Shigella flexneri 4c strain 1205 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AD871_RS09130 (1651220) | 1651220..1651966 | + | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| AD871_RS09135 (1652055) | 1652055..1652741 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| AD871_RS09140 (1652919) | 1652919..1653122 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AD871_RS09145 (1653158) | 1653158..1654618 | - | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| AD871_RS09150 (1654707) | 1654707..1655726 | - | 1020 | Protein_1656 | MHS family MFS transporter YdfJ | - |
| AD871_RS09155 (1655788) | 1655788..1656944 | + | 1157 | Protein_1657 | IS3 family transposase IS600 | Transposase |
| AD871_RS28745 (1656941) | 1656941..1657246 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| AD871_RS09160 (1657271) | 1657271..1657510 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AD871_RS09165 (1657510) | 1657510..1657797 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AD871_RS09170 (1657869) | 1657869..1658024 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AD871_RS09175 (1658242) | 1658242..1658493 | + | 252 | WP_000980987.1 | protein Rem | - |
| AD871_RS09180 (1658560) | 1658560..1658838 | + | 279 | Protein_1663 | hypothetical protein | - |
| AD871_RS09185 (1658840) | 1658840..1659889 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| AD871_RS09190 (1659902) | 1659902..1660258 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AD871_RS09195 (1660273) | 1660273..1661094 | + | 822 | WP_000762882.1 | antitermination protein | - |
| AD871_RS28750 (1662015) | 1662015..1662123 | + | 109 | Protein_1667 | DUF3927 family protein | - |
| AD871_RS09220 (1662404) | 1662404..1662739 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| AD871_RS09225 (1662999) | 1662999..1663184 | + | 186 | Protein_1669 | DUF1737 domain-containing protein | - |
| AD871_RS29985 (1663184) | 1663184..1663345 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| AD871_RS09230 (1663495) | 1663495..1663674 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| AD871_RS09235 (1663699) | 1663699..1664577 | - | 879 | Protein_1672 | IS3 family transposase IS600 | Transposase |
| AD871_RS09250 (1665348) | 1665348..1666097 | + | 750 | Protein_1674 | Type 1 fimbrin D-mannose specific adhesin | VF |
| AD871_RS09255 (1666431) | 1666431..1668710 | + | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| AD871_RS09260 (1668958) | 1668958..1669161 | + | 204 | WP_000543395.1 | two-component system connector SafA | - |
| AD871_RS09265 (1669229) | 1669229..1669990 | + | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| AD871_RS09270 (1670392) | 1670392..1670538 | + | 147 | Protein_1678 | sulfatase | - |
| AD871_RS09280 (1671305) | 1671305..1671784 | - | 480 | Protein_1680 | cupin domain-containing protein | - |
| AD871_RS09290 (1672106) | 1672106..1672870 | + | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| AD871_RS09295 (1672890) | 1672890..1673828 | + | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
| AD871_RS09300 (1673884) | 1673884..1675173 | + | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| AD871_RS09305 (1675170) | 1675170..1675463 | + | 294 | WP_000081083.1 | ferredoxin family protein | - |
| AD871_RS09310 (1675520) | 1675520..1677166 | + | 1647 | WP_005050037.1 | medium-chain fatty-acid--CoA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|